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Tan0015870 (gene) of Snake gourd v1 genome

Gene IDTan0015870
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionORF40s
Genome locationContig00127:140581..140898
RNA-Seq ExpressionTan0015870
SyntenyTan0015870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFA98036.1 ribosomal protein S10 [Tanacetum cinerariifolium]8.6e-2994.37Show/hide
Query:  FESIPPVFGDFHFQPDSPPTCPLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCPSSL
        FESIPP+FGDFHFQ DSPPTCPLRPVIPKNTCPPRLTAAAGTELAGASSSS VMIAHSTKELYKRHC SSL
Subjt:  FESIPPVFGDFHFQPDSPPTCPLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCPSSL

KAA0060780.1 ORF40s [Cucumis melo var. makuwa]1.2e-4998Show/hide
Query:  IPPVFGDFHFQPDSPPTCPLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSQCG
        IPPVFGD +FQPDSPPTCPLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSQCG
Subjt:  IPPVFGDFHFQPDSPPTCPLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSQCG

KAF5786086.1 hypothetical protein HanXRQr2_Chr10g0436591 [Helianthus annuus]1.9e-2892.96Show/hide
Query:  PPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSQCG
        PPRL AAAGTELAGASSSS VMIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPP GVR VS+SQCG
Subjt:  PPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSQCG

PPE01242.1 hypothetical protein GOBAR_DD01736 [Gossypium barbadense]1.8e-2695.38Show/hide
Query:  IPPVFGDFHFQPDSPPTCPLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCP
        IPPVFGDFHFQPDSPPTCPLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELY+R  P
Subjt:  IPPVFGDFHFQPDSPPTCPLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCP

PPR89027.1 hypothetical protein GOBAR_AA31647 [Gossypium barbadense]3.6e-2791.3Show/hide
Query:  GFESIPPVFGDFHFQPDSPPTCPLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCP
        G   IPPVFGDFHFQPDSPPTCPLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELY+R  P
Subjt:  GFESIPPVFGDFHFQPDSPPTCPLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCP

TrEMBL top hitse value%identityAlignment
A0A0A9RWP6 Uncharacterized protein4.0e-3294.67Show/hide
Query:  KNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSQCG
        +   PPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSQCG
Subjt:  KNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSQCG

A0A2P5WD91 Uncharacterized protein1.8e-2791.3Show/hide
Query:  GFESIPPVFGDFHFQPDSPPTCPLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCP
        G   IPPVFGDFHFQPDSPPTCPLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELY+R  P
Subjt:  GFESIPPVFGDFHFQPDSPPTCPLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCP

A0A2T7C7G7 Uncharacterized protein4.1e-16100Show/hide
Query:  MIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVR
        MIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVR
Subjt:  MIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVR

A0A446X8H3 Uncharacterized protein8.4e-2278.08Show/hide
Query:  CPLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVG
        C L     + T  P LTAAAG ELA  SSSSPVMIAHSTKELYK+HCPSSLTRYCWIGLSPIVQDSPLLPP G
Subjt:  CPLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVG

A0A5A7V0C9 ORF40s5.6e-5098Show/hide
Query:  IPPVFGDFHFQPDSPPTCPLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSQCG
        IPPVFGD +FQPDSPPTCPLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSQCG
Subjt:  IPPVFGDFHFQPDSPPTCPLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSQCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCGAGAGCATTCCACCAGTTTTTGGCGACTTTCACTTTCAACCCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCCG
TCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTCGAGTCCTGTCATGATCGCGCACTCGACGAAAGAGCTTTACAAGCGGCATTGCCCTTCTTCACTCA
CGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCGAGAGCATTCCACCAGTTTTTGGCGACTTTCACTTTCAACCCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCCG
TCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTCGAGTCCTGTCATGATCGCGCACTCGACGAAAGAGCTTTACAAGCGGCATTGCCCTTCTTCACTCA
CGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGA
Protein sequenceShow/hide protein sequence
MGFESIPPVFGDFHFQPDSPPTCPLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSQCG