; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0015888 (gene) of Snake gourd v1 genome

Gene IDTan0015888
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSmall ubiquitin-related modifier
Genome locationLG01:18544063..18547314
RNA-Seq ExpressionTan0015888
SyntenyTan0015888
Gene Ontology termsGO:0016925 - protein sumoylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0031386 - protein tag (molecular function)
GO:0044389 - ubiquitin-like protein ligase binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR022617 - Rad60/SUMO-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149348.1 small ubiquitin-related modifier 1 [Cucumis sativus]1.6e-4598.96Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG

XP_015899516.1 small ubiquitin-related modifier 1-like [Ziziphus jujuba]3.0e-4488.35Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGAPKE
        MSGVTNQEEDKKP+DQ+AHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSV+ NSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG  P  
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGAPKE

Query:  YMV
        Y +
Subjt:  YMV

XP_018812104.1 small ubiquitin-related modifier 1 [Juglans regia]5.1e-4496.84Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

XP_022158763.1 small ubiquitin-related modifier 1-like [Momordica charantia]2.1e-4598.96Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG

XP_038905908.1 small ubiquitin-related modifier 1 [Benincasa hispida]1.6e-4598.96Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG

TrEMBL top hitse value%identityAlignment
A0A0A0L2Y3 Small ubiquitin-related modifier7.6e-4698.96Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG

A0A1S3BKS1 Small ubiquitin-related modifier7.6e-4698.96Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG

A0A6A1VQH5 Small ubiquitin-related modifier2.5e-4496.84Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

A0A6J1DX09 Small ubiquitin-related modifier1.0e-4598.96Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG

A0A6P4BK52 Small ubiquitin-related modifier1.4e-4488.35Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGAPKE
        MSGVTNQEEDKKP+DQ+AHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSV+ NSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG  P  
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGAPKE

Query:  YMV
        Y +
Subjt:  YMV

SwissProt top hitse value%identityAlignment
O13351 Ubiquitin-like protein pmt3/smt31.8e-2357.45Show/hide
Query:  SGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        +G T+Q++ K  T+   HINLKV GQD NEVFF+IKK+T+  KLM  YC RQ   +NS+ FL DG R+R +QTP EL+MEDGD+I+A+L Q GG
Subjt:  SGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

P55852 Small ubiquitin-related modifier 18.4e-4292.22Show/hide
Query:  NQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        NQEEDKKP D  AHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVD+NSIAFLFDGRRLRAEQTP+EL+MEDGDEIDAMLHQTGG
Subjt:  NQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

P55857 Small ubiquitin-related modifier 12.5e-3885.11Show/hide
Query:  EEDKKPT---DQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGAP
        EEDKKP       AHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVD+N+IAFLFDGRRLR EQTP+ELEMEDGDEIDAMLHQTGG  P
Subjt:  EEDKKPT---DQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGAP

Q9FLP5 Small ubiquitin-related modifier 35.3e-2055.06Show/hide
Query:  EDKKPTD--QSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        +D KP D  Q AH+ LKVK QDG+EV F+ KKS  LKKLM  YCDR+ + L++ AF+F+G R+   +TP+EL+MEDGD IDA    +GG
Subjt:  EDKKPTD--QSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

Q9FLP6 Small ubiquitin-related modifier 21.4e-4194.44Show/hide
Query:  EEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGA
        EEDKKP DQ AHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGGGA
Subjt:  EEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGA

Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 16.0e-4392.22Show/hide
Query:  NQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        NQEEDKKP D  AHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVD+NSIAFLFDGRRLRAEQTP+EL+MEDGDEIDAMLHQTGG
Subjt:  NQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

AT5G55160.1 small ubiquitin-like modifier 21.0e-4294.44Show/hide
Query:  EEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGA
        EEDKKP DQ AHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGGGA
Subjt:  EEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGA

AT5G55160.2 small ubiquitin-like modifier 26.2e-4082.52Show/hide
Query:  EEDKKPTDQSAHINLKVKGQ-------------DGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTG
        EEDKKP DQ AHINLKVKGQ             DGNEVFFRIK+STQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTG
Subjt:  EEDKKPTDQSAHINLKVKGQ-------------DGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTG

Query:  GGA
        GGA
Subjt:  GGA

AT5G55170.1 small ubiquitin-like modifier 33.8e-2155.06Show/hide
Query:  EDKKPTD--QSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        +D KP D  Q AH+ LKVK QDG+EV F+ KKS  LKKLM  YCDR+ + L++ AF+F+G R+   +TP+EL+MEDGD IDA    +GG
Subjt:  EDKKPTD--QSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

AT5G55856.1 Ubiquitin-like superfamily protein9.3e-2051.16Show/hide
Query:  DKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        DKKP   S+HI +KVK QD   V+FRIK+  +L+K+M+AY D+  V+++++ FLFDG R++  QTP EL +ED DEI+A   Q GG
Subjt:  DKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGGCGTCACCAACCAAGAGGAGGACAAGAAGCCTACCGATCAGTCCGCGCATATCAACCTCAAAGTCAAGGGCCAGGATGGGAATGAAGTTTTCTTCCGGATCAA
AAAGAGTACCCAACTGAAGAAGCTAATGAATGCTTACTGTGACAGGCAGTCGGTTGATTTGAACTCCATTGCATTCTTGTTTGACGGCCGCCGACTGCGTGCAGAGCAGA
CTCCGGAAGAGCTGGAAATGGAGGATGGAGATGAGATCGATGCAATGCTTCATCAGACTGGAGGCGGAGCTCCAAAGGAATACATGGTTTCACCAAGAAGGCTTGGTTCT
GCAGCTGTACTTGAAGCTTCGTGGGAAGCTAAGTATGTCGATTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGGCGTCACCAACCAAGAGGAGGACAAGAAGCCTACCGATCAGTCCGCGCATATCAACCTCAAAGTCAAGGGCCAGGATGGGAATGAAGTTTTCTTCCGGATCAA
AAAGAGTACCCAACTGAAGAAGCTAATGAATGCTTACTGTGACAGGCAGTCGGTTGATTTGAACTCCATTGCATTCTTGTTTGACGGCCGCCGACTGCGTGCAGAGCAGA
CTCCGGAAGAGCTGGAAATGGAGGATGGAGATGAGATCGATGCAATGCTTCATCAGACTGGAGGCGGAGCTCCAAAGGAATACATGGTTTCACCAAGAAGGCTTGGTTCT
GCAGCTGTACTTGAAGCTTCGTGGGAAGCTAAGTATGTCGATTGTTAA
Protein sequenceShow/hide protein sequence
MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGAPKEYMVSPRRLGS
AAVLEASWEAKYVDC