| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 4.7e-228 | 60.47 | Show/hide |
Query: CPQIPARNAPQSVKEAYDRWTKANDKAKVYILASVSEILAKKHEGM-----------EMFGQPSGQIRHESLKYVYNSRMKEGSSMREHVLDLMVHFNVA
CP P ++A QSV++AYDRWTKANDKA+++ILAS+S+IL+KKHE M EMFGQPS QI+ E+ NVA
Subjt: CPQIPARNAPQSVKEAYDRWTKANDKAKVYILASVSEILAKKHEGM-----------EMFGQPSGQIRHESLKYVYNSRMKEGSSMREHVLDLMVHFNVA
Query: EMNRAVIDEQSQRFQKGSSSGTKFCSSSSGLKKTQKKKIG-GKGKALATDKGKGKAKLADKGKCFHCNMDGHWNRNCPKYLYELKEKK------------
R +F S SG +K QK+K G GKG +A + KGKAK+A K KCFHCN+D HW NCPKYL + KEK+
Subjt: EMNRAVIDEQSQRFQKGSSSGTKFCSSSSGLKKTQKKKIG-GKGKALATDKGKGKAKLADKGKCFHCNMDGHWNRNCPKYLYELKEKK------------
Query: ------------GAINHVCSSFQETSSFKELEEA------------------------------------------------------------------
GA NHVCSS QETSSFK+LE++
Subjt: ------------GAINHVCSSFQETSSFKELEEA------------------------------------------------------------------
Query: -------------------------------------------KISPNNNTYLWHLRLGHINLNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFT
+ISPNNNTYLWHLRLGHINL+RI RL KNGLLNKL+D SLPPCESCLEGKMTKRPFT
Subjt: -------------------------------------------KISPNNNTYLWHLRLGHINLNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFT
Query: GKGYRAVEPLELVHSDLCGPVNVKARGGYEYFITFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKS
GKGYRA EPLEL+HSDLCGP+NVKARGG+EYFI+FIDDYSRYGYLYLM HKSEALEKFKEYK EVEN L K IK LRSDRGGEYMDLRFQDYMIEHGI+S
Subjt: GKGYRAVEPLELVHSDLCGPVNVKARGGYEYFITFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKS
Query: QLSAPNTPQQNGVSERRNRTLLDMVRSMMSYAQLPASFWGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCPAHVLVTNPKKLELRSRLC
QLSAP TPQQNGVSERRNRTLLDMVRSMMSYAQLP+SFWGYAVET + ILN+VPSKSVSETPFELW+GRKPSL HFRIWGCPAHVLVTNPKKLE RSRLC
Subjt: QLSAPNTPQQNGVSERRNRTLLDMVRSMMSYAQLPASFWGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCPAHVLVTNPKKLELRSRLC
Query: QFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVSQPDRYL
QFVGYPKETRGGLF+DPQEN+V VSTNATFLEEDHMRNHKPRSKLVL+EAT E TRVV + GPSSRVD +TS QS PSQSL MPRRSGRVVSQP+RYL
Subjt: QFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVSQPDRYL
Query: GLAETQVVIHDDGVEDPLSYKQAMNDVDKDQ
GL ETQVVI DDGVEDPLSYKQAMNDVDKDQ
Subjt: GLAETQVVIHDDGVEDPLSYKQAMNDVDKDQ
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 1.8e-224 | 59.64 | Show/hide |
Query: CPQIPARNAPQSVKEAYDRWTKANDKAKVYILASVSEILAKKHEGM-----------EMFGQPSGQIRHESLKYVYNSRMKEGSSMREHVLDLMVHFNVA
CP P ++A QSV++AYDRWTKANDKA+++ILAS+S+IL+KKHE M EMFGQPS QI+ E+ NVA
Subjt: CPQIPARNAPQSVKEAYDRWTKANDKAKVYILASVSEILAKKHEGM-----------EMFGQPSGQIRHESLKYVYNSRMKEGSSMREHVLDLMVHFNVA
Query: EMNRAVIDEQSQRFQKGSSSGTKFCSSSSGLKKTQKKKIG-GKGKALATDKGKGKAKLADKGKCFHCNMDGHWNRNCPKYLYELKEKK------------
R +F S SG +K QK+K G GKG +A + KGKAK+A K KCFHCN+D HW NCPKYL + EK+
Subjt: EMNRAVIDEQSQRFQKGSSSGTKFCSSSSGLKKTQKKKIG-GKGKALATDKGKGKAKLADKGKCFHCNMDGHWNRNCPKYLYELKEKK------------
Query: ------------GAINHVCSSFQETSSFKELEEA------------------------------------------------------------------
GA NHVCSS QETSSFK+LE++
Subjt: ------------GAINHVCSSFQETSSFKELEEA------------------------------------------------------------------
Query: -------------------------------------------KISPNNNTYLWHLRLGHINLNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFT
+ISPNNNTYLWHLRLGHINL+RI RL K+GLLNKL+D SLPPCESCLEGKMTKRPFT
Subjt: -------------------------------------------KISPNNNTYLWHLRLGHINLNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFT
Query: GKGYRAVEPLELVHSDLCGPVNVKARGGYEYFITFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKS
GKGYRA EPLEL+HSDLCGP+NVKARG +EYFI+FIDDYSRYGYLYLM HKSEALEKFKEYK EVEN L K IK RSDRGGEYMDL FQDYMIEHGI+S
Subjt: GKGYRAVEPLELVHSDLCGPVNVKARGGYEYFITFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKS
Query: QLSAPNTPQQNGVSERRNRTLLDMVRSMMSYAQLPASFWGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCPAHVLVTNPKKLELRSRLC
QLSAP TPQQNGVSERRNRTLLDMVRSMMSYAQLP+SFWGYAVET + ILN+VPSKSVSETPFELW+GRKPSL HFRIWGCPAHVLVTNPKKLE RSRLC
Subjt: QLSAPNTPQQNGVSERRNRTLLDMVRSMMSYAQLPASFWGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCPAHVLVTNPKKLELRSRLC
Query: QFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVSQPDRYL
QFVGYPKETRGGLF+DP+EN+V VSTNATFLEEDHMRNHKPRSKLVL+EAT E TRVV + GPSSRVD +TS QS PSQSL MPRRSGRVVSQP+RYL
Subjt: QFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVSQPDRYL
Query: GLAETQVVIHDDGVEDPLSYKQAMNDVDKDQ
GL ETQVVI DDGVEDPLSYKQAMNDVDKDQ
Subjt: GLAETQVVIHDDGVEDPLSYKQAMNDVDKDQ
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-234 | 71.07 | Show/hide |
Query: CPQIPARNAPQSVKEAYDRWTKANDKAKVYILASVSEILAKKHEGM-----------EMFGQPSGQIRHESLKYVYNSRMKEGSSMREHVLDLMVHFNVA
CP P ++A QSV++AYDRWTKANDKA+++ILAS+S+IL+KKHE M EMFGQPS QI+ E+ NVA
Subjt: CPQIPARNAPQSVKEAYDRWTKANDKAKVYILASVSEILAKKHEGM-----------EMFGQPSGQIRHESLKYVYNSRMKEGSSMREHVLDLMVHFNVA
Query: EMNRAVIDEQSQRFQKGSSSGTKFCSSSSGLKKTQKKKIG-GKGKALATDKGKGKAKLADKGKCFHCNMDGHWNRNCPKYLYELKEKKGAINHVCSSFQE
R +F S SG +K QK+K G GKG +A + KGKAK+A K KCFHCN+D HW NCPKYL + KEK+GA NHVCSS QE
Subjt: EMNRAVIDEQSQRFQKGSSSGTKFCSSSSGLKKTQKKKIG-GKGKALATDKGKGKAKLADKGKCFHCNMDGHWNRNCPKYLYELKEKKGAINHVCSSFQE
Query: TSSFKELEEAKISPNNNT-------YLWHLRLGHINLNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAVEPLELVHSDLCGPVNVKAR
TSSFK+LE+++++ T + +LGHINL+RI RL KNGLLNKL+D SLPPCESCLEGKMTKRPFTGKGYRA EPLEL+HSDLCGP+NVKAR
Subjt: TSSFKELEEAKISPNNNT-------YLWHLRLGHINLNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAVEPLELVHSDLCGPVNVKAR
Query: GGYEYFITFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVR
GG+EYFI+FIDDYSRYGYLYLM HKSEALEKFKEYK EVEN L K IK LRSDRGGEYMDLRFQDYMIEHGI+SQLSAP TPQQNGVSERRNRTLLDMVR
Subjt: GGYEYFITFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVR
Query: SMMSYAQLPASFWGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFYDPQENKVIVST
SMMSYAQLP+SFWGYAVET + ILN+VPSKSVSETPFELW+GRKPSL HFRIWGCPAHVLVTNPKKLE RSRLCQFVGYPKETRGGLF+DPQEN+V VST
Subjt: SMMSYAQLPASFWGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFYDPQENKVIVST
Query: NATFLEEDHMRNHKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVSQPDRYLGLAETQVVIHDDGVEDPLSYKQAMND
NATFLEEDHMRNHKPRSKLVL+EAT E TRVV + GPSSRVD +TS QS PSQSL MPRRSGRVVSQP+RYLGL ETQVVI DDGVEDPLSYKQAMND
Subjt: NATFLEEDHMRNHKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVSQPDRYLGLAETQVVIHDDGVEDPLSYKQAMND
Query: VDKDQ
VDKDQ
Subjt: VDKDQ
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| KAA0062886.1 gag/pol protein [Cucumis melo var. makuwa] | 2.1e-220 | 68.21 | Show/hide |
Query: CPQIPARNAPQSVKEAYDRWTKANDKAKVYILASVSEILAKKHEGM-----------EMFGQPSGQIRHESLKYVYNSRMKEGSSMREHVLDLMVHFNVA
CP P + A QSV++AYDRWTKANDKA+++ILAS+S+IL+KKHE M E+FGQ S QI+ E+ NVA
Subjt: CPQIPARNAPQSVKEAYDRWTKANDKAKVYILASVSEILAKKHEGM-----------EMFGQPSGQIRHESLKYVYNSRMKEGSSMREHVLDLMVHFNVA
Query: EMNRAVIDEQSQRFQKGSSSGTKFCSSSSGLKKTQKKKIG-GKGKALATDKGKGKAKLADKGKCFHCNMDGHWNRNCPKYLYELKEKKGAINHVCSSFQE
R F SSSG +K QK+K G GKG +A + GKGKAK+ KGKCFHC +D HW +N PKYL + KEK+GA NHV SS QE
Subjt: EMNRAVIDEQSQRFQKGSSSGTKFCSSSSGLKKTQKKKIG-GKGKALATDKGKGKAKLADKGKCFHCNMDGHWNRNCPKYLYELKEKKGAINHVCSSFQE
Query: TSSFKELEEAKISPNNNTYLWHLRLGHIN------LNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAVEPLELVHSDLCGPVNVKARG
TSSFK+LEE++++ L++G + + +RL KNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRA EPLEL+HSDLCGP+NVKARG
Subjt: TSSFKELEEAKISPNNNTYLWHLRLGHIN------LNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAVEPLELVHSDLCGPVNVKARG
Query: GYEYFITFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVRS
G+EYFI+FIDDY RYGYLYLM HK EALEKFKEYK EVEN L K IK LR DRG EYMDLRFQDYMIEHGI+SQLSAP TPQQNGVSERRNRTLLDMV S
Subjt: GYEYFITFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVRS
Query: MMSYAQLPASFWGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFYDPQENKVIVSTN
MMSYAQL +SFWGYAVE + ILN+V SKSVSETPFELW+GRKPSL HFRIWGCPA+VLVTNPKKLELRSRLCQFVGYPKETRGGLF+DPQEN+V+VSTN
Subjt: MMSYAQLPASFWGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFYDPQENKVIVSTN
Query: ATFLEEDHMRNHKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVSQPDRYLGLAETQVVIHDDGVEDPLSYKQAMNDV
ATFLEEDHM +HKPR+KLVLNEAT E TRVV + GPSSRVD +TS QS PSQSL MPRRSGRVVSQP+RYLG ETQVVI DDGVEDPLSYKQAMNDV
Subjt: ATFLEEDHMRNHKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVSQPDRYLGLAETQVVIHDDGVEDPLSYKQAMNDV
Query: DKDQ
DKDQ
Subjt: DKDQ
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| TYK02840.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-234 | 71.07 | Show/hide |
Query: CPQIPARNAPQSVKEAYDRWTKANDKAKVYILASVSEILAKKHEGM-----------EMFGQPSGQIRHESLKYVYNSRMKEGSSMREHVLDLMVHFNVA
CP P ++A QSV++AYDRWTKANDKA+++ILAS+S+IL+KKHE M EMFGQPS QI+ E+ NVA
Subjt: CPQIPARNAPQSVKEAYDRWTKANDKAKVYILASVSEILAKKHEGM-----------EMFGQPSGQIRHESLKYVYNSRMKEGSSMREHVLDLMVHFNVA
Query: EMNRAVIDEQSQRFQKGSSSGTKFCSSSSGLKKTQKKKIG-GKGKALATDKGKGKAKLADKGKCFHCNMDGHWNRNCPKYLYELKEKKGAINHVCSSFQE
R +F S SG +K QK+K G GKG +A + KGKAK+A K KCFHCN+D HW NCPKYL + KEK+GA NHVCSS QE
Subjt: EMNRAVIDEQSQRFQKGSSSGTKFCSSSSGLKKTQKKKIG-GKGKALATDKGKGKAKLADKGKCFHCNMDGHWNRNCPKYLYELKEKKGAINHVCSSFQE
Query: TSSFKELEEAKISPNNNT-------YLWHLRLGHINLNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAVEPLELVHSDLCGPVNVKAR
TSSFK+LE+++++ T + +LGHINL+RI RL KNGLLNKL+D SLPPCESCLEGKMTKRPFTGKGYRA EPLEL+HSDLCGP+NVKAR
Subjt: TSSFKELEEAKISPNNNT-------YLWHLRLGHINLNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAVEPLELVHSDLCGPVNVKAR
Query: GGYEYFITFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVR
GG+EYFI+FIDDYSRYGYLYLM HKSEALEKFKEYK EVEN L K IK LRSDRGGEYMDLRFQDYMIEHGI+SQLSAP TPQQNGVSERRNRTLLDMVR
Subjt: GGYEYFITFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVR
Query: SMMSYAQLPASFWGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFYDPQENKVIVST
SMMSYAQLP+SFWGYAVET + ILN+VPSKSVSETPFELW+GRKPSL HFRIWGCPAHVLVTNPKKLE RSRLCQFVGYPKETRGGLF+DPQEN+V VST
Subjt: SMMSYAQLPASFWGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFYDPQENKVIVST
Query: NATFLEEDHMRNHKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVSQPDRYLGLAETQVVIHDDGVEDPLSYKQAMND
NATFLEEDHMRNHKPRSKLVL+EAT E TRVV + GPSSRVD +TS QS PSQSL MPRRSGRVVSQP+RYLGL ETQVVI DDGVEDPLSYKQAMND
Subjt: NATFLEEDHMRNHKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVSQPDRYLGLAETQVVIHDDGVEDPLSYKQAMND
Query: VDKDQ
VDKDQ
Subjt: VDKDQ
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T2V9 Gag/pol protein | 8.9e-225 | 59.64 | Show/hide |
Query: CPQIPARNAPQSVKEAYDRWTKANDKAKVYILASVSEILAKKHEGM-----------EMFGQPSGQIRHESLKYVYNSRMKEGSSMREHVLDLMVHFNVA
CP P ++A QSV++AYDRWTKANDKA+++ILAS+S+IL+KKHE M EMFGQPS QI+ E+ NVA
Subjt: CPQIPARNAPQSVKEAYDRWTKANDKAKVYILASVSEILAKKHEGM-----------EMFGQPSGQIRHESLKYVYNSRMKEGSSMREHVLDLMVHFNVA
Query: EMNRAVIDEQSQRFQKGSSSGTKFCSSSSGLKKTQKKKIG-GKGKALATDKGKGKAKLADKGKCFHCNMDGHWNRNCPKYLYELKEKK------------
R +F S SG +K QK+K G GKG +A + KGKAK+A K KCFHCN+D HW NCPKYL + EK+
Subjt: EMNRAVIDEQSQRFQKGSSSGTKFCSSSSGLKKTQKKKIG-GKGKALATDKGKGKAKLADKGKCFHCNMDGHWNRNCPKYLYELKEKK------------
Query: ------------GAINHVCSSFQETSSFKELEEA------------------------------------------------------------------
GA NHVCSS QETSSFK+LE++
Subjt: ------------GAINHVCSSFQETSSFKELEEA------------------------------------------------------------------
Query: -------------------------------------------KISPNNNTYLWHLRLGHINLNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFT
+ISPNNNTYLWHLRLGHINL+RI RL K+GLLNKL+D SLPPCESCLEGKMTKRPFT
Subjt: -------------------------------------------KISPNNNTYLWHLRLGHINLNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFT
Query: GKGYRAVEPLELVHSDLCGPVNVKARGGYEYFITFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKS
GKGYRA EPLEL+HSDLCGP+NVKARG +EYFI+FIDDYSRYGYLYLM HKSEALEKFKEYK EVEN L K IK RSDRGGEYMDL FQDYMIEHGI+S
Subjt: GKGYRAVEPLELVHSDLCGPVNVKARGGYEYFITFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKS
Query: QLSAPNTPQQNGVSERRNRTLLDMVRSMMSYAQLPASFWGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCPAHVLVTNPKKLELRSRLC
QLSAP TPQQNGVSERRNRTLLDMVRSMMSYAQLP+SFWGYAVET + ILN+VPSKSVSETPFELW+GRKPSL HFRIWGCPAHVLVTNPKKLE RSRLC
Subjt: QLSAPNTPQQNGVSERRNRTLLDMVRSMMSYAQLPASFWGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCPAHVLVTNPKKLELRSRLC
Query: QFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVSQPDRYL
QFVGYPKETRGGLF+DP+EN+V VSTNATFLEEDHMRNHKPRSKLVL+EAT E TRVV + GPSSRVD +TS QS PSQSL MPRRSGRVVSQP+RYL
Subjt: QFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVSQPDRYL
Query: GLAETQVVIHDDGVEDPLSYKQAMNDVDKDQ
GL ETQVVI DDGVEDPLSYKQAMNDVDKDQ
Subjt: GLAETQVVIHDDGVEDPLSYKQAMNDVDKDQ
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| A0A5A7TZD0 Gag/pol protein | 2.3e-228 | 60.47 | Show/hide |
Query: CPQIPARNAPQSVKEAYDRWTKANDKAKVYILASVSEILAKKHEGM-----------EMFGQPSGQIRHESLKYVYNSRMKEGSSMREHVLDLMVHFNVA
CP P ++A QSV++AYDRWTKANDKA+++ILAS+S+IL+KKHE M EMFGQPS QI+ E+ NVA
Subjt: CPQIPARNAPQSVKEAYDRWTKANDKAKVYILASVSEILAKKHEGM-----------EMFGQPSGQIRHESLKYVYNSRMKEGSSMREHVLDLMVHFNVA
Query: EMNRAVIDEQSQRFQKGSSSGTKFCSSSSGLKKTQKKKIG-GKGKALATDKGKGKAKLADKGKCFHCNMDGHWNRNCPKYLYELKEKK------------
R +F S SG +K QK+K G GKG +A + KGKAK+A K KCFHCN+D HW NCPKYL + KEK+
Subjt: EMNRAVIDEQSQRFQKGSSSGTKFCSSSSGLKKTQKKKIG-GKGKALATDKGKGKAKLADKGKCFHCNMDGHWNRNCPKYLYELKEKK------------
Query: ------------GAINHVCSSFQETSSFKELEEA------------------------------------------------------------------
GA NHVCSS QETSSFK+LE++
Subjt: ------------GAINHVCSSFQETSSFKELEEA------------------------------------------------------------------
Query: -------------------------------------------KISPNNNTYLWHLRLGHINLNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFT
+ISPNNNTYLWHLRLGHINL+RI RL KNGLLNKL+D SLPPCESCLEGKMTKRPFT
Subjt: -------------------------------------------KISPNNNTYLWHLRLGHINLNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFT
Query: GKGYRAVEPLELVHSDLCGPVNVKARGGYEYFITFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKS
GKGYRA EPLEL+HSDLCGP+NVKARGG+EYFI+FIDDYSRYGYLYLM HKSEALEKFKEYK EVEN L K IK LRSDRGGEYMDLRFQDYMIEHGI+S
Subjt: GKGYRAVEPLELVHSDLCGPVNVKARGGYEYFITFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKS
Query: QLSAPNTPQQNGVSERRNRTLLDMVRSMMSYAQLPASFWGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCPAHVLVTNPKKLELRSRLC
QLSAP TPQQNGVSERRNRTLLDMVRSMMSYAQLP+SFWGYAVET + ILN+VPSKSVSETPFELW+GRKPSL HFRIWGCPAHVLVTNPKKLE RSRLC
Subjt: QLSAPNTPQQNGVSERRNRTLLDMVRSMMSYAQLPASFWGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCPAHVLVTNPKKLELRSRLC
Query: QFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVSQPDRYL
QFVGYPKETRGGLF+DPQEN+V VSTNATFLEEDHMRNHKPRSKLVL+EAT E TRVV + GPSSRVD +TS QS PSQSL MPRRSGRVVSQP+RYL
Subjt: QFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVSQPDRYL
Query: GLAETQVVIHDDGVEDPLSYKQAMNDVDKDQ
GL ETQVVI DDGVEDPLSYKQAMNDVDKDQ
Subjt: GLAETQVVIHDDGVEDPLSYKQAMNDVDKDQ
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| A0A5A7UYE8 Gag/pol protein | 5.5e-235 | 71.07 | Show/hide |
Query: CPQIPARNAPQSVKEAYDRWTKANDKAKVYILASVSEILAKKHEGM-----------EMFGQPSGQIRHESLKYVYNSRMKEGSSMREHVLDLMVHFNVA
CP P ++A QSV++AYDRWTKANDKA+++ILAS+S+IL+KKHE M EMFGQPS QI+ E+ NVA
Subjt: CPQIPARNAPQSVKEAYDRWTKANDKAKVYILASVSEILAKKHEGM-----------EMFGQPSGQIRHESLKYVYNSRMKEGSSMREHVLDLMVHFNVA
Query: EMNRAVIDEQSQRFQKGSSSGTKFCSSSSGLKKTQKKKIG-GKGKALATDKGKGKAKLADKGKCFHCNMDGHWNRNCPKYLYELKEKKGAINHVCSSFQE
R +F S SG +K QK+K G GKG +A + KGKAK+A K KCFHCN+D HW NCPKYL + KEK+GA NHVCSS QE
Subjt: EMNRAVIDEQSQRFQKGSSSGTKFCSSSSGLKKTQKKKIG-GKGKALATDKGKGKAKLADKGKCFHCNMDGHWNRNCPKYLYELKEKKGAINHVCSSFQE
Query: TSSFKELEEAKISPNNNT-------YLWHLRLGHINLNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAVEPLELVHSDLCGPVNVKAR
TSSFK+LE+++++ T + +LGHINL+RI RL KNGLLNKL+D SLPPCESCLEGKMTKRPFTGKGYRA EPLEL+HSDLCGP+NVKAR
Subjt: TSSFKELEEAKISPNNNT-------YLWHLRLGHINLNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAVEPLELVHSDLCGPVNVKAR
Query: GGYEYFITFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVR
GG+EYFI+FIDDYSRYGYLYLM HKSEALEKFKEYK EVEN L K IK LRSDRGGEYMDLRFQDYMIEHGI+SQLSAP TPQQNGVSERRNRTLLDMVR
Subjt: GGYEYFITFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVR
Query: SMMSYAQLPASFWGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFYDPQENKVIVST
SMMSYAQLP+SFWGYAVET + ILN+VPSKSVSETPFELW+GRKPSL HFRIWGCPAHVLVTNPKKLE RSRLCQFVGYPKETRGGLF+DPQEN+V VST
Subjt: SMMSYAQLPASFWGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFYDPQENKVIVST
Query: NATFLEEDHMRNHKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVSQPDRYLGLAETQVVIHDDGVEDPLSYKQAMND
NATFLEEDHMRNHKPRSKLVL+EAT E TRVV + GPSSRVD +TS QS PSQSL MPRRSGRVVSQP+RYLGL ETQVVI DDGVEDPLSYKQAMND
Subjt: NATFLEEDHMRNHKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVSQPDRYLGLAETQVVIHDDGVEDPLSYKQAMND
Query: VDKDQ
VDKDQ
Subjt: VDKDQ
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| A0A5A7V8W0 Gag/pol protein | 1.0e-220 | 68.21 | Show/hide |
Query: CPQIPARNAPQSVKEAYDRWTKANDKAKVYILASVSEILAKKHEGM-----------EMFGQPSGQIRHESLKYVYNSRMKEGSSMREHVLDLMVHFNVA
CP P + A QSV++AYDRWTKANDKA+++ILAS+S+IL+KKHE M E+FGQ S QI+ E+ NVA
Subjt: CPQIPARNAPQSVKEAYDRWTKANDKAKVYILASVSEILAKKHEGM-----------EMFGQPSGQIRHESLKYVYNSRMKEGSSMREHVLDLMVHFNVA
Query: EMNRAVIDEQSQRFQKGSSSGTKFCSSSSGLKKTQKKKIG-GKGKALATDKGKGKAKLADKGKCFHCNMDGHWNRNCPKYLYELKEKKGAINHVCSSFQE
R F SSSG +K QK+K G GKG +A + GKGKAK+ KGKCFHC +D HW +N PKYL + KEK+GA NHV SS QE
Subjt: EMNRAVIDEQSQRFQKGSSSGTKFCSSSSGLKKTQKKKIG-GKGKALATDKGKGKAKLADKGKCFHCNMDGHWNRNCPKYLYELKEKKGAINHVCSSFQE
Query: TSSFKELEEAKISPNNNTYLWHLRLGHIN------LNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAVEPLELVHSDLCGPVNVKARG
TSSFK+LEE++++ L++G + + +RL KNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRA EPLEL+HSDLCGP+NVKARG
Subjt: TSSFKELEEAKISPNNNTYLWHLRLGHIN------LNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAVEPLELVHSDLCGPVNVKARG
Query: GYEYFITFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVRS
G+EYFI+FIDDY RYGYLYLM HK EALEKFKEYK EVEN L K IK LR DRG EYMDLRFQDYMIEHGI+SQLSAP TPQQNGVSERRNRTLLDMV S
Subjt: GYEYFITFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVRS
Query: MMSYAQLPASFWGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFYDPQENKVIVSTN
MMSYAQL +SFWGYAVE + ILN+V SKSVSETPFELW+GRKPSL HFRIWGCPA+VLVTNPKKLELRSRLCQFVGYPKETRGGLF+DPQEN+V+VSTN
Subjt: MMSYAQLPASFWGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFYDPQENKVIVSTN
Query: ATFLEEDHMRNHKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVSQPDRYLGLAETQVVIHDDGVEDPLSYKQAMNDV
ATFLEEDHM +HKPR+KLVLNEAT E TRVV + GPSSRVD +TS QS PSQSL MPRRSGRVVSQP+RYLG ETQVVI DDGVEDPLSYKQAMNDV
Subjt: ATFLEEDHMRNHKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVSQPDRYLGLAETQVVIHDDGVEDPLSYKQAMNDV
Query: DKDQ
DKDQ
Subjt: DKDQ
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| A0A5D3BUN8 Gag/pol protein | 5.5e-235 | 71.07 | Show/hide |
Query: CPQIPARNAPQSVKEAYDRWTKANDKAKVYILASVSEILAKKHEGM-----------EMFGQPSGQIRHESLKYVYNSRMKEGSSMREHVLDLMVHFNVA
CP P ++A QSV++AYDRWTKANDKA+++ILAS+S+IL+KKHE M EMFGQPS QI+ E+ NVA
Subjt: CPQIPARNAPQSVKEAYDRWTKANDKAKVYILASVSEILAKKHEGM-----------EMFGQPSGQIRHESLKYVYNSRMKEGSSMREHVLDLMVHFNVA
Query: EMNRAVIDEQSQRFQKGSSSGTKFCSSSSGLKKTQKKKIG-GKGKALATDKGKGKAKLADKGKCFHCNMDGHWNRNCPKYLYELKEKKGAINHVCSSFQE
R +F S SG +K QK+K G GKG +A + KGKAK+A K KCFHCN+D HW NCPKYL + KEK+GA NHVCSS QE
Subjt: EMNRAVIDEQSQRFQKGSSSGTKFCSSSSGLKKTQKKKIG-GKGKALATDKGKGKAKLADKGKCFHCNMDGHWNRNCPKYLYELKEKKGAINHVCSSFQE
Query: TSSFKELEEAKISPNNNT-------YLWHLRLGHINLNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAVEPLELVHSDLCGPVNVKAR
TSSFK+LE+++++ T + +LGHINL+RI RL KNGLLNKL+D SLPPCESCLEGKMTKRPFTGKGYRA EPLEL+HSDLCGP+NVKAR
Subjt: TSSFKELEEAKISPNNNT-------YLWHLRLGHINLNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAVEPLELVHSDLCGPVNVKAR
Query: GGYEYFITFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVR
GG+EYFI+FIDDYSRYGYLYLM HKSEALEKFKEYK EVEN L K IK LRSDRGGEYMDLRFQDYMIEHGI+SQLSAP TPQQNGVSERRNRTLLDMVR
Subjt: GGYEYFITFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVR
Query: SMMSYAQLPASFWGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFYDPQENKVIVST
SMMSYAQLP+SFWGYAVET + ILN+VPSKSVSETPFELW+GRKPSL HFRIWGCPAHVLVTNPKKLE RSRLCQFVGYPKETRGGLF+DPQEN+V VST
Subjt: SMMSYAQLPASFWGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFYDPQENKVIVST
Query: NATFLEEDHMRNHKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVSQPDRYLGLAETQVVIHDDGVEDPLSYKQAMND
NATFLEEDHMRNHKPRSKLVL+EAT E TRVV + GPSSRVD +TS QS PSQSL MPRRSGRVVSQP+RYLGL ETQVVI DDGVEDPLSYKQAMND
Subjt: NATFLEEDHMRNHKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVSQPDRYLGLAETQVVIHDDGVEDPLSYKQAMND
Query: VDKDQ
VDKDQ
Subjt: VDKDQ
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 8.4e-47 | 35.86 | Show/hide |
Query: NNTYLWHLRLGHIN------LNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRA--VEPLELVHSDLCGPVNVKARGGYEYFITFIDDYS
NN LWH R GHI+ + R S LLN LE S CE CL GK + PF + PL +VHSD+CGP+ YF+ F+D ++
Subjt: NNTYLWHLRLGHIN------LNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRA--VEPLELVHSDLCGPVNVKARGGYEYFITFIDDYS
Query: RYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVRSMMSYAQLPASFWG
Y YL+ +KS+ F+++ A+ E + L D G EY+ + + ++ GI L+ P+TPQ NGVSER RT+ + R+M+S A+L SFWG
Subjt: RYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVRSMMSYAQLPASFWG
Query: YAVETTIQILNSVPSKSV---SETPFELWKGRKPSLQHFRIWGCPAHVLVTNPK-KLELRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHM
AV T ++N +PS+++ S+TP+E+W +KP L+H R++G +V + N + K + +S FVGY E G +D K IV+ + ++E +M
Subjt: YAVETTIQILNSVPSKSV---SETPFELWKGRKPSLQHFRIWGCPAHVLVTNPK-KLELRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHM
Query: RNHK
N +
Subjt: RNHK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-60 | 39.65 | Show/hide |
Query: LWHLRLGHINLNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAVEPLELVHSDLCGPVNVKARGGYEYFITFIDDYSRYGYLYLMHHKS
LWH R+GH++ ++ L+K L++ + ++ PC+ CL GK + F R + L+LV+SD+CGP+ +++ GG +YF+TFIDD SR ++Y++ K
Subjt: LWHLRLGHINLNRIERLSKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAVEPLELVHSDLCGPVNVKARGGYEYFITFIDDYSRYGYLYLMHHKS
Query: EALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVRSMMSYAQLPASFWGYAVETTIQILNS
+ + F+++ A VE G+ +K LRSD GGEY F++Y HGI+ + + P TPQ NGV+ER NRT+++ VRSM+ A+LP SFWG AV+T ++N
Subjt: EALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVRSMMSYAQLPASFWGYAVETTIQILNS
Query: VPSKSVS-ETPFELWKGRKPSLQHFRIWGCP--AHVLVTNPKKLELRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEED
PS ++ E P +W ++ S H +++GC AHV KL+ +S C F+GY E G +DP + KVI S + F E +
Subjt: VPSKSVS-ETPFELWKGRKPSLQHFRIWGCP--AHVLVTNPKKLELRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEED
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| Q12337 Transposon Ty2-GR1 Gag-Pol polyprotein | 1.0e-23 | 29.18 | Show/hide |
Query: LWHLRLGHINLNRIER-LSKNGLLNKLEDD------SLPPCESCLEGKMTKRPFTGKGYR-----AVEPLELVHSDLCGPVNVKARGGYEYFITFIDDYS
L H LGH N I++ L KN + E D S C CL GK TK KG R + EP + +H+D+ GPV+ + YFI+F D+ +
Subjt: LWHLRLGHINLNRIER-LSKNGLLNKLEDD------SLPPCESCLEGKMTKRPFTGKGYR-----AVEPLELVHSDLCGPVNVKARGGYEYFITFIDDYS
Query: RYGYLYLMHHKSE--ALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVRSMMSYAQLPASF
R+ ++Y +H + E L F A ++N + ++ DRG EY + + GI + + + +GV+ER NRTLL+ R+++ + LP
Subjt: RYGYLYLMHHKSE--ALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVRSMMSYAQLPASF
Query: WGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRI----------WGCPAHVLVTNP-KKLELRSRLCQFVGYPKETRGGLFYDPQENKVIVSTN
W AVE + I NS+ S K RK + QH + +G P V NP K+ R + + + G + Y P K + +TN
Subjt: WGYAVETTIQILNSVPSKSVSETPFELWKGRKPSLQHFRI----------WGCPAHVLVTNP-KKLELRSRLCQFVGYPKETRGGLFYDPQENKVIVSTN
Query: ATFLE
L+
Subjt: ATFLE
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 8.4e-39 | 29.21 | Show/hide |
Query: WHLRLGHINLNRIERLSKNGLLNKLE-DDSLPPCESCLEGKMTKRPFTGKGYRAVEPLELVHSDLCGPVNVKARGGYEYFITFIDDYSRYGYLYLMHHKS
WH RLGH + + + N L+ L C CL K K PF+ + PLE ++SD+ + + Y Y++ F+D ++RY +LY + KS
Subjt: WHLRLGHINLNRIERLSKNGLLNKLE-DDSLPPCESCLEGKMTKRPFTGKGYRAVEPLELVHSDLCGPVNVKARGGYEYFITFIDDYSRYGYLYLMHHKS
Query: EALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVRSMMSYAQLPASFWGYAVETTIQILNS
+ E F +K +EN I T SD GGE++ L +Y +HGI S P+TP+ NG+SER++R +++ +++S+A +P ++W YA + ++N
Subjt: EALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVRSMMSYAQLPASFWGYAVETTIQILNS
Query: VPSKSVS-ETPFELWKGRKPSLQHFRIWGCPAHVLVT--NPKKLELRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEE-----------DHMRN
+P+ + E+PF+ G P+ R++GC + + N KL+ +SR C F+GY L Q +++ +S + F E ++
Subjt: VPSKSVS-ETPFELWKGRKPSLQHFRIWGCPAHVLVT--NPKKLELRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEE-----------DHMRN
Query: HKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVS
+ S V + T PTR PS A+T P S P R+ +V S
Subjt: HKPRSKLVLNEATHEPTRVVGQAGPSSRVDGRASTSSQSRPSQSLGMPRRSGRVVS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.7e-39 | 33.59 | Show/hide |
Query: WHLRLGHINLNRIERLSKNGLLNKLE-DDSLPPCESCLEGKMTKRPFTGKGYRAVEPLELVHSDLCGPVNVKARGGYEYFITFIDDYSRYGYLYLMHHKS
WH RLGH +L + + N L L L C C K K PF+ + +PLE ++SD+ + + Y Y++ F+D ++RY +LY + KS
Subjt: WHLRLGHINLNRIERLSKNGLLNKLE-DDSLPPCESCLEGKMTKRPFTGKGYRAVEPLELVHSDLCGPVNVKARGGYEYFITFIDDYSRYGYLYLMHHKS
Query: EALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVRSMMSYAQLPASFWGYAVETTIQILNS
+ + F +K+ VEN I TL SD GGE++ LR DY+ +HGI S P+TP+ NG+SER++R +++M +++S+A +P ++W YA + ++N
Subjt: EALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQQNGVSERRNRTLLDMVRSMMSYAQLPASFWGYAVETTIQILNS
Query: VPSKSVS-ETPFELWKGRKPSLQHFRIWGCPAHVLVT--NPKKLELRSRLCQFVGY
+P+ + ++PF+ G+ P+ + +++GC + + N KLE +S+ C F+GY
Subjt: VPSKSVS-ETPFELWKGRKPSLQHFRIWGCPAHVLVT--NPKKLELRSRLCQFVGY
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