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Tan0015896 (gene) of Snake gourd v1 genome

Gene IDTan0015896
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
Genome locationLG04:4253127..4256637
RNA-Seq ExpressionTan0015896
SyntenyTan0015896
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR016488 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446979.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucumis melo]1.6e-6493.18Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLP IMDIYNLDDV  +SQLRST+ASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDLGTKDQGISNFLKNFYKSNYF
        YVVGREGLVQD G KDQG+SNFLKNFY+SNYF
Subjt:  YVVGREGLVQDLGTKDQGISNFLKNFYKSNYF

XP_022957489.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucurbita moschata]3.6e-6493.18Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLP IM+IYNLDDV   SQ+RST+ASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDLGTKDQGISNFLKNFYKSNYF
        YVVGREGLVQD+G+KDQGISNFLKNFYKSNYF
Subjt:  YVVGREGLVQDLGTKDQGISNFLKNFYKSNYF

XP_022985413.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucurbita maxima]3.6e-6493.18Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLP IM+IYNLDDV  IS +RST+ASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDLGTKDQGISNFLKNFYKSNYF
        YVVGREGLVQD+G+KDQGISNFLKNFYKSNYF
Subjt:  YVVGREGLVQDLGTKDQGISNFLKNFYKSNYF

XP_023552714.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucurbita pepo subsp. pepo]2.5e-6594.7Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLP IMDIYNLDDV  ISQ+RST+ASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDLGTKDQGISNFLKNFYKSNYF
        YVVGREGLVQD+G+KDQGISNFLKNFYKSNYF
Subjt:  YVVGREGLVQDLGTKDQGISNFLKNFYKSNYF

XP_038892169.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Benincasa hispida]1.1e-6595.45Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLP IMDIYNLDDV  +SQLRST+ASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDLGTKDQGISNFLKNFYKSNYF
        YVVGREGLVQDLG KDQGISNFLKNFYKSNYF
Subjt:  YVVGREGLVQDLGTKDQGISNFLKNFYKSNYF

TrEMBL top hitse value%identityAlignment
A0A0A0KRV0 Uncharacterized protein3.3e-6391.67Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEAR+RVFDFFRSACRSLP IMDIYNLDDV  +SQLRS +ASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDLGTKDQGISNFLKNFYKSNYF
        YV+GREGLVQD G KDQG SNFLKNFYKSNYF
Subjt:  YVVGREGLVQDLGTKDQGISNFLKNFYKSNYF

A0A1S3BH79 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 67.8e-6593.18Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLP IMDIYNLDDV  +SQLRST+ASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDLGTKDQGISNFLKNFYKSNYF
        YVVGREGLVQD G KDQG+SNFLKNFY+SNYF
Subjt:  YVVGREGLVQDLGTKDQGISNFLKNFYKSNYF

A0A6J1CBT6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 65.0e-6493.18Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFT R LKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDV  ISQLRS+VAS+IRKNSH+ DPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDLGTKDQGISNFLKNFYKSNYF
        YVVG EGLVQDLGTKDQGISNFLKNFYKSNYF
Subjt:  YVVGREGLVQDLGTKDQGISNFLKNFYKSNYF

A0A6J1H232 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 61.7e-6493.18Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLP IM+IYNLDDV   SQ+RST+ASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDLGTKDQGISNFLKNFYKSNYF
        YVVGREGLVQD+G+KDQGISNFLKNFYKSNYF
Subjt:  YVVGREGLVQDLGTKDQGISNFLKNFYKSNYF

A0A6J1JDJ2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 61.7e-6493.18Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLP IM+IYNLDDV  IS +RST+ASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDLGTKDQGISNFLKNFYKSNYF
        YVVGREGLVQD+G+KDQGISNFLKNFYKSNYF
Subjt:  YVVGREGLVQDLGTKDQGISNFLKNFYKSNYF

SwissProt top hitse value%identityAlignment
P56556 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 61.7e-0835.23Show/hide
Query:  PPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  + EA+ RV + +R+  R +P  +  + LD  + +   R  V     KN+HVTDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q02366 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 64.0e-1035.23Show/hide
Query:  PPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  + EA+ RV + +R+  R +P  + ++ LD  +++ Q R  V    +KN+H+TDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q0MQA4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 61.7e-0835.23Show/hide
Query:  PPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  + EA+ RV + +R+  R +P  +  + LD  + +   R  V     KN+HVTDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q9CQZ5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 61.5e-0937.5Show/hide
Query:  PPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  L EA+ RV + +R+  R +P  + +  LD  + + Q R  V     KN+HVTDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q9LHI0 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 61.8e-5073.08Show/hide
Query:  FTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV
        F +R + VPPNSA+L EAR RVFDFFR+ACRS+PTIMDIYNL DVVA SQLR  ++++IR N+H+TDPKVID+L+FKGMEEL +I +HAKQRHHIIGQYV
Subjt:  FTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV

Query:  VGREGLVQDLGTKDQGISNFLKNFYKSNYF
        VG EGLVQ+ G KDQG ++FLKNFY SNYF
Subjt:  VGREGLVQDLGTKDQGISNFLKNFYKSNYF

Arabidopsis top hitse value%identityAlignment
AT3G12260.1 LYR family of Fe/S cluster biogenesis protein1.3e-5173.08Show/hide
Query:  FTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV
        F +R + VPPNSA+L EAR RVFDFFR+ACRS+PTIMDIYNL DVVA SQLR  ++++IR N+H+TDPKVID+L+FKGMEEL +I +HAKQRHHIIGQYV
Subjt:  FTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV

Query:  VGREGLVQDLGTKDQGISNFLKNFYKSNYF
        VG EGLVQ+ G KDQG ++FLKNFY SNYF
Subjt:  VGREGLVQDLGTKDQGISNFLKNFYKSNYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATTCACAGTTCGAGGTCTGAAAGTTCCGCCGAACTCCGCGAGTCTAGAAGAAGCCAGGAATCGAGTCTTCGACTTCTTCAGATCAGCATGTCGATCATTGCCTAC
AATCATGGATATTTACAACTTAGATGATGTTGTTGCCATTTCTCAGCTCCGCTCTACCGTCGCCTCCGAGATCCGCAAGAATTCCCATGTCACGGATCCTAAGGTGATTG
ATATGCTTCTTTTCAAGGGAATGGAAGAGCTTGGTAACATTACCGAACATGCAAAGCAGCGGCATCACATTATTGGTCAGTATGTGGTCGGTCGCGAAGGACTTGTGCAA
GATTTGGGCACCAAGGATCAGGGCATATCCAATTTTCTCAAAAACTTCTATAAGAGTAACTACTTTTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAATTAAATCCGGAAGAGAAAACTCAGAAAAGAAAACCGCGCGTGGAAGATTGTTGGGGGCAAGCGCGAACAGCAATTGCCGAGCGAGTTCACTCATTGATTTGG
CGAAATCGAGAGAGAGAAGGCGATGGCATTCACAGTTCGAGGTCTGAAAGTTCCGCCGAACTCCGCGAGTCTAGAAGAAGCCAGGAATCGAGTCTTCGACTTCTTCAGAT
CAGCATGTCGATCATTGCCTACAATCATGGATATTTACAACTTAGATGATGTTGTTGCCATTTCTCAGCTCCGCTCTACCGTCGCCTCCGAGATCCGCAAGAATTCCCAT
GTCACGGATCCTAAGGTGATTGATATGCTTCTTTTCAAGGGAATGGAAGAGCTTGGTAACATTACCGAACATGCAAAGCAGCGGCATCACATTATTGGTCAGTATGTGGT
CGGTCGCGAAGGACTTGTGCAAGATTTGGGCACCAAGGATCAGGGCATATCCAATTTTCTCAAAAACTTCTATAAGAGTAACTACTTTTAAACTTTGCTGTTCTTTGAAT
ATAAGACATCCATAGTTTTGATTTGTGATCTTGAGAAAATAATGAAGAAACTATATCTGTCTCCTGGACAATGATACTATTTGATCATTTTGTTGGATTGAATTGTTGAT
ACCTTATGATCCGCTGTAAGCTTTTCATAAGCAAAGCAATCCAAGATCTTTGGTTCTATTTGCTCCGTTCTAAACTTTTAATCCTAAATGATTGTCTACTCAGTTTTGG
Protein sequenceShow/hide protein sequence
MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVVAISQLRSTVASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQ
DLGTKDQGISNFLKNFYKSNYF