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Tan0015932 (gene) of Snake gourd v1 genome

Gene IDTan0015932
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 30
Genome locationLG07:72212079..72212309
RNA-Seq ExpressionTan0015932
SyntenyTan0015932
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637268.1 hypothetical protein CSA_017684 [Cucumis sativus]9.4e-0952.17Show/hide
Query:  MKWWMICLVLISMVVMAEEVGAADRKYLTFISCSQPSPPPFCHHHRNKLPKVPNNPYDRGCSPIFRCRG
        MK W+IC+V ISM+VM++EVGA          C  PSPPP C          P NPYDRGCS I RCRG
Subjt:  MKWWMICLVLISMVVMAEEVGAADRKYLTFISCSQPSPPPFCHHHRNKLPKVPNNPYDRGCSPIFRCRG

KGN66449.1 hypothetical protein Csa_006867 [Cucumis sativus]7.2e-0953.52Show/hide
Query:  MKWWMICLVLISMVVMAEEVGAADRKYLTFIS-CSQPSPPPFCHHHRNKLPKVPNNPYDRGCSPIFRCRGG
        MK W+IC  L+SM+VM+ EV AA+ K+L F   C QPSPP  C+        +   PYDRGCSPI RCRGG
Subjt:  MKWWMICLVLISMVVMAEEVGAADRKYLTFIS-CSQPSPPPFCHHHRNKLPKVPNNPYDRGCSPIFRCRGG

XP_016900883.1 PREDICTED: protein RALF-like 30 [Cucumis melo]9.4e-0953.52Show/hide
Query:  MKWWMICLVLISMVVMAEEVGAADRKYLTFIS-CSQPSPPPFCHHHRNKLPKVPNNPYDRGCSPIFRCRGG
        MK W+IC  L+SM+VM  EV AA  K+L F+  C QPSPP  C+ H      +    YDRGCSPI RCRGG
Subjt:  MKWWMICLVLISMVVMAEEVGAADRKYLTFIS-CSQPSPPPFCHHHRNKLPKVPNNPYDRGCSPIFRCRGG

XP_022947821.1 protein RALF-like 10 [Cucurbita moschata]6.1e-0852.11Show/hide
Query:  MKWWMICLVLISMVVMAEEVGAADRKYLTFIS-CSQPSPPPFCHHHRNKLPKVPNNPYDRGCSPIFRCRGG
        M+ W+ICLVLI M+V++++V A++ K+L F   C QP+PPP C         VP NPY RGCS I RCRGG
Subjt:  MKWWMICLVLISMVVMAEEVGAADRKYLTFIS-CSQPSPPPFCHHHRNKLPKVPNNPYDRGCSPIFRCRGG

XP_038877580.1 protein RALF-like 11 [Benincasa hispida]2.5e-0953.52Show/hide
Query:  MKWWMICLVLISMVVMAEEVGAADRKYLTFIS-CSQPSPPPFCHHHRNKLPKVPNNPYDRGCSPIFRCRGG
        MK W+IC+V ISM+V+   V AA++KYL F+  C+QP+PPP C   +    +V  NPY+RGCS I RCRGG
Subjt:  MKWWMICLVLISMVVMAEEVGAADRKYLTFIS-CSQPSPPPFCHHHRNKLPKVPNNPYDRGCSPIFRCRGG

TrEMBL top hitse value%identityAlignment
A0A0A0LI94 Uncharacterized protein1.6e-0956.34Show/hide
Query:  MKWWMICLVLISMVVMAEEVGAADRKYLTFIS-CSQPSPPPFCHHHRNKLPKVPNNPYDRGCSPIFRCRGG
        MK W+ICL LI M+V+ +EV AA+ K+L FI  C+QPSPPP C  +R+K+ +   NPY+R CS I RCRGG
Subjt:  MKWWMICLVLISMVVMAEEVGAADRKYLTFIS-CSQPSPPPFCHHHRNKLPKVPNNPYDRGCSPIFRCRGG

A0A0A0LZK3 Uncharacterized protein3.5e-0953.52Show/hide
Query:  MKWWMICLVLISMVVMAEEVGAADRKYLTFIS-CSQPSPPPFCHHHRNKLPKVPNNPYDRGCSPIFRCRGG
        MK W+IC  L+SM+VM+ EV AA+ K+L F   C QPSPP  C+        +   PYDRGCSPI RCRGG
Subjt:  MKWWMICLVLISMVVMAEEVGAADRKYLTFIS-CSQPSPPPFCHHHRNKLPKVPNNPYDRGCSPIFRCRGG

A0A0A0M0X3 Uncharacterized protein4.5e-0952.17Show/hide
Query:  MKWWMICLVLISMVVMAEEVGAADRKYLTFISCSQPSPPPFCHHHRNKLPKVPNNPYDRGCSPIFRCRG
        MK W+IC+V ISM+VM++EVGA          C  PSPPP C          P NPYDRGCS I RCRG
Subjt:  MKWWMICLVLISMVVMAEEVGAADRKYLTFISCSQPSPPPFCHHHRNKLPKVPNNPYDRGCSPIFRCRG

A0A1S4DY33 protein RALF-like 304.5e-0953.52Show/hide
Query:  MKWWMICLVLISMVVMAEEVGAADRKYLTFIS-CSQPSPPPFCHHHRNKLPKVPNNPYDRGCSPIFRCRGG
        MK W+IC  L+SM+VM  EV AA  K+L F+  C QPSPP  C+ H      +    YDRGCSPI RCRGG
Subjt:  MKWWMICLVLISMVVMAEEVGAADRKYLTFIS-CSQPSPPPFCHHHRNKLPKVPNNPYDRGCSPIFRCRGG

A0A6J1G7J2 protein RALF-like 102.9e-0852.11Show/hide
Query:  MKWWMICLVLISMVVMAEEVGAADRKYLTFIS-CSQPSPPPFCHHHRNKLPKVPNNPYDRGCSPIFRCRGG
        M+ W+ICLVLI M+V++++V A++ K+L F   C QP+PPP C         VP NPY RGCS I RCRGG
Subjt:  MKWWMICLVLISMVVMAEEVGAADRKYLTFIS-CSQPSPPPFCHHHRNKLPKVPNNPYDRGCSPIFRCRGG

SwissProt top hitse value%identityAlignment
F4ISE1 Protein RALF-like 123.8e-0543.66Show/hide
Query:  MKWWMICLVLISMVVMAEEVGAADR-KYLTFISCSQPSPPPFCH--HHRNKLPKVPNNPYDRGCSPIFRCR
        MK W+I L++I  VV+AE V + +  +Y     C+ P+PPP C+      K P  P N Y RGCS I RCR
Subjt:  MKWWMICLVLISMVVMAEEVGAADR-KYLTFISCSQPSPPPFCH--HHRNKLPKVPNNPYDRGCSPIFRCR

F4ISE2 Protein RALF-like 135.9e-0643.66Show/hide
Query:  MKWWMICLVLISMVVMAEEVGAADR-KYLTFISCSQPSPPPFCH--HHRNKLPKVPNNPYDRGCSPIFRCR
        MK W+ICL++I   V+AE V + +  +Y     C+ P+PPP C+      K P  P N Y RGCS I RCR
Subjt:  MKWWMICLVLISMVVMAEEVGAADR-KYLTFISCSQPSPPPFCH--HHRNKLPKVPNNPYDRGCSPIFRCR

O64466 Protein RALF-like 113.5e-0643.66Show/hide
Query:  MKWWMICLVLISMVVMAEEVGAADR-KYLTFISCSQPSPPPFCH--HHRNKLPKVPNNPYDRGCSPIFRCR
        MK W+ICL++I   V+AE V + +  +Y     C+ P+PPP C+      K P  P N Y RGCS I RCR
Subjt:  MKWWMICLVLISMVVMAEEVGAADR-KYLTFISCSQPSPPPFCH--HHRNKLPKVPNNPYDRGCSPIFRCR

Q0V822 Protein RALF-like 263.1e-0745.21Show/hide
Query:  MKWWMICLVLISMVVMAEEVGA-ADRKYL---TFISCSQPSPPPFCH-HHRNKLPKVPNNPYDRGCSPIFRCR
        MK WMI L++I + V+ E+  A   RKYL       C  P+PP  CH H+ +  P+VP + Y RGCS I RCR
Subjt:  MKWWMICLVLISMVVMAEEVGA-ADRKYL---TFISCSQPSPPPFCH-HHRNKLPKVPNNPYDRGCSPIFRCR

Arabidopsis top hitse value%identityAlignment
AT2G19030.1 ralf-like 112.5e-0743.66Show/hide
Query:  MKWWMICLVLISMVVMAEEVGAADR-KYLTFISCSQPSPPPFCH--HHRNKLPKVPNNPYDRGCSPIFRCR
        MK W+ICL++I   V+AE V + +  +Y     C+ P+PPP C+      K P  P N Y RGCS I RCR
Subjt:  MKWWMICLVLISMVVMAEEVGAADR-KYLTFISCSQPSPPPFCH--HHRNKLPKVPNNPYDRGCSPIFRCR

AT2G19040.1 RALF-like 122.7e-0643.66Show/hide
Query:  MKWWMICLVLISMVVMAEEVGAADR-KYLTFISCSQPSPPPFCH--HHRNKLPKVPNNPYDRGCSPIFRCR
        MK W+I L++I  VV+AE V + +  +Y     C+ P+PPP C+      K P  P N Y RGCS I RCR
Subjt:  MKWWMICLVLISMVVMAEEVGAADR-KYLTFISCSQPSPPPFCH--HHRNKLPKVPNNPYDRGCSPIFRCR

AT2G19045.1 RALF-like 134.2e-0743.66Show/hide
Query:  MKWWMICLVLISMVVMAEEVGAADR-KYLTFISCSQPSPPPFCH--HHRNKLPKVPNNPYDRGCSPIFRCR
        MK W+ICL++I   V+AE V + +  +Y     C+ P+PPP C+      K P  P N Y RGCS I RCR
Subjt:  MKWWMICLVLISMVVMAEEVGAADR-KYLTFISCSQPSPPPFCH--HHRNKLPKVPNNPYDRGCSPIFRCR

AT3G25170.1 ralf-like 262.2e-0845.21Show/hide
Query:  MKWWMICLVLISMVVMAEEVGA-ADRKYL---TFISCSQPSPPPFCH-HHRNKLPKVPNNPYDRGCSPIFRCR
        MK WMI L++I + V+ E+  A   RKYL       C  P+PP  CH H+ +  P+VP + Y RGCS I RCR
Subjt:  MKWWMICLVLISMVVMAEEVGA-ADRKYL---TFISCSQPSPPPFCH-HHRNKLPKVPNNPYDRGCSPIFRCR

AT4G13075.1 RALF-like 301.5e-0437.5Show/hide
Query:  MKWWMICLVLISMVVMAE-EVGAADRKYL---TFISCSQPSPPPFCHHHRNK-LPKVPNNPYDRGCSPIFRC
        MK W+ICL++IS+ +M E  + A   K+L       C +P+PPP C    +   P+   N Y  GCS + RC
Subjt:  MKWWMICLVLISMVVMAE-EVGAADRKYL---TFISCSQPSPPPFCHHHRNK-LPKVPNNPYDRGCSPIFRC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTGGTGGATGATATGTCTGGTTTTGATTAGTATGGTGGTTATGGCTGAAGAAGTTGGCGCCGCCGACAGAAAATATCTGACTTTTATAAGTTGCAGTCAGCCATC
ACCGCCTCCATTTTGCCATCATCATCGCAATAAACTCCCCAAAGTTCCCAACAATCCTTATGATCGCGGTTGCTCCCCAATCTTCCGTTGTCGTGGAGGAAGAGGAGGAG
GAGGAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTGGTGGATGATATGTCTGGTTTTGATTAGTATGGTGGTTATGGCTGAAGAAGTTGGCGCCGCCGACAGAAAATATCTGACTTTTATAAGTTGCAGTCAGCCATC
ACCGCCTCCATTTTGCCATCATCATCGCAATAAACTCCCCAAAGTTCCCAACAATCCTTATGATCGCGGTTGCTCCCCAATCTTCCGTTGTCGTGGAGGAAGAGGAGGAG
GAGGAAATTAA
Protein sequenceShow/hide protein sequence
MKWWMICLVLISMVVMAEEVGAADRKYLTFISCSQPSPPPFCHHHRNKLPKVPNNPYDRGCSPIFRCRGGRGGGGN