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Tan0015936 (gene) of Snake gourd v1 genome

Gene IDTan0015936
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationContig00124:217822..220085
RNA-Seq ExpressionTan0015936
SyntenyTan0015936
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4272171.1 unnamed protein product [Prunus armeniaca]2.8e-1190.91Show/hide
Query:  MPRAAQRLVSNRARRLLADRKGQDPNLTSQGVSVHLRSRQDTFD
        MPRAAQR+VS RAR LLADRKGQDPNLTSQGVSVHLRSRQD FD
Subjt:  MPRAAQRLVSNRARRLLADRKGQDPNLTSQGVSVHLRSRQDTFD
PKI31097.1 hypothetical protein CRG98_048512 [Punica granatum]6.0e-0650.54Show/hide
Query:  QLAYNKGPVKANDRAYHQFRDHSK-CCQPRMPRAAQRLVSNRARRLLADRKGQDPNLTSQGVSVHLRSRQDTFDPNVTVALAKAAS--GLDKT
        Q  +  GP   N   Y Q  + S+    P          SNRARRLLADRKG DPNLT QGVS      Q     NVTVALAKAAS  GLDKT
Subjt:  QLAYNKGPVKANDRAYHQFRDHSK-CCQPRMPRAAQRLVSNRARRLLADRKGQDPNLTSQGVSVHLRSRQDTFDPNVTVALAKAAS--GLDKT
XP_027184067.1 LOW QUALITY PROTEIN: uncharacterized protein LOC113782373 [Coffea eugenioides]2.1e-1193.02Show/hide
Query:  MTQQVASITCSHRGLKAFQSRLVGAPERKNLHRSRCEQQGHEE
        MTQQVASITCSHRGLKAFQSRLVGA ERKNLHRSRCEQQG+ E
Subjt:  MTQQVASITCSHRGLKAFQSRLVGAPERKNLHRSRCEQQGHEE
TrEMBL top hitse value%identityAlignment
A0A2I0HHA7 Uncharacterized protein2.9e-0650.54Show/hide
Query:  QLAYNKGPVKANDRAYHQFRDHSK-CCQPRMPRAAQRLVSNRARRLLADRKGQDPNLTSQGVSVHLRSRQDTFDPNVTVALAKAAS--GLDKT
        Q  +  GP   N   Y Q  + S+    P          SNRARRLLADRKG DPNLT QGVS      Q     NVTVALAKAAS  GLDKT
Subjt:  QLAYNKGPVKANDRAYHQFRDHSK-CCQPRMPRAAQRLVSNRARRLLADRKGQDPNLTSQGVSVHLRSRQDTFDPNVTVALAKAAS--GLDKT
A0A6J5U726 Uncharacterized protein1.3e-1190.91Show/hide
Query:  MPRAAQRLVSNRARRLLADRKGQDPNLTSQGVSVHLRSRQDTFD
        MPRAAQR+VS RAR LLADRKGQDPNLTSQGVSVHLRSRQD FD
Subjt:  MPRAAQRLVSNRARRLLADRKGQDPNLTSQGVSVHLRSRQDTFD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACAGCAAGTTGCTAGTATAACTTGCTCACACAGGGGTCTGAAAGCTTTTCAGTCAAGACTGGTCGGGGCTCCGGAGAGGAAGAATCTACATCGATCACGATGCGA
GCAACAAGGCCATGAAGAACGAGAGAGGGGAACAGGGGGTCAAAGTGACGAGACACCGGGATCGCGTCGCCTTACGACACCAATAACAGTCATTTCTGATGAGGAGGAGG
AAAGTCAAATAAAGGGGATTGAAATTGATCCGCCTTTTAGAGATAGGGCGGACGACAGGACTAGTCTCGCACAACGCCAATACCGTACAGAATGCATAGCCCCATTTACT
ATATGTACCGATGAAAGTGACAAAGGTCATAAGCCTTACGAAAAAGGGGCAAAGCAAGGGTTGTTGGCAATGCGACATCAGTTGGCATATAACAAAGGACCAGTGAAAGC
CAATGATAGAGCTTACCACCAATTTCGAGACCATTCGAAGTGCTGTCAGCCCAGGATGCCTAGAGCCGCACAACGATTGGTTTCCAACCGCGCAAGGAGGTTGTTGGCAG
ATAGGAAAGGCCAAGATCCGAACTTGACGTCCCAAGGAGTCTCTGTTCATCTTCGTTCAAGGCAGGACACATTTGACCCCAATGTTACAGTGGCTCTAGCTAAGGCTGCC
AGCGGTCTAGATAAGACGCTGCGCAGGACTCTCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACACAGCAAGTTGCTAGTATAACTTGCTCACACAGGGGTCTGAAAGCTTTTCAGTCAAGACTGGTCGGGGCTCCGGAGAGGAAGAATCTACATCGATCACGATGCGA
GCAACAAGGCCATGAAGAACGAGAGAGGGGAACAGGGGGTCAAAGTGACGAGACACCGGGATCGCGTCGCCTTACGACACCAATAACAGTCATTTCTGATGAGGAGGAGG
AAAGTCAAATAAAGGGGATTGAAATTGATCCGCCTTTTAGAGATAGGGCGGACGACAGGACTAGTCTCGCACAACGCCAATACCGTACAGAATGCATAGCCCCATTTACT
ATATGTACCGATGAAAGTGACAAAGGTCATAAGCCTTACGAAAAAGGGGCAAAGCAAGGGTTGTTGGCAATGCGACATCAGTTGGCATATAACAAAGGACCAGTGAAAGC
CAATGATAGAGCTTACCACCAATTTCGAGACCATTCGAAGTGCTGTCAGCCCAGGATGCCTAGAGCCGCACAACGATTGGTTTCCAACCGCGCAAGGAGGTTGTTGGCAG
ATAGGAAAGGCCAAGATCCGAACTTGACGTCCCAAGGAGTCTCTGTTCATCTTCGTTCAAGGCAGGACACATTTGACCCCAATGTTACAGTGGCTCTAGCTAAGGCTGCC
AGCGGTCTAGATAAGACGCTGCGCAGGACTCTCAATTGA
Protein sequenceShow/hide protein sequence
MTQQVASITCSHRGLKAFQSRLVGAPERKNLHRSRCEQQGHEERERGTGGQSDETPGSRRLTTPITVISDEEEESQIKGIEIDPPFRDRADDRTSLAQRQYRTECIAPFT
ICTDESDKGHKPYEKGAKQGLLAMRHQLAYNKGPVKANDRAYHQFRDHSKCCQPRMPRAAQRLVSNRARRLLADRKGQDPNLTSQGVSVHLRSRQDTFDPNVTVALAKAA
SGLDKTLRRTLN