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Tan0015971 (gene) of Snake gourd v1 genome

Gene IDTan0015971
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDynein light chain
Genome locationLG08:72561226..72562187
RNA-Seq ExpressionTan0015971
SyntenyTan0015971
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8518956.1 hypothetical protein F0562_016270 [Nyssa sinensis]3.7e-4377.57Show/hide
Query:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSIEE
        MLEGKAV+RETDMPE +Q HV+ELAY+ALD HE SDCQSIA +IKQ+FDEAYGPAWHCVVGK FG CITHLCGSFIFF VD MEFL+FKDG+D ++S EE
Subjt:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSIEE

Query:  TVGVRQK
         +GV QK
Subjt:  TVGVRQK

KGN58830.1 hypothetical protein Csa_001625 [Cucumis sativus]2.2e-5190.65Show/hide
Query:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSIEE
        MLEGKAVVRETDMP+GIQ HVLELAYKALDQHEVSDCQSIA FIKQRFDEAYGPAWHCV GKAFGGCITHLCGS+IFFHVDTMEFL+FKDGRDC KS+EE
Subjt:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSIEE

Query:  TVGVRQK
        TVGV +K
Subjt:  TVGVRQK

PON90790.1 Dynein light chain [Trema orientale]2.8e-4376.85Show/hide
Query:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSIEE
        MLEGKAVVRETDMPE +Q HV+ELAYKALD HEVSDCQSIA +IKQ+FDE YGPAW+CVVGK FG CITHLCGSFIFFHV+ MEFLIFKDG+D +++++E
Subjt:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSIEE

Query:  TVGVRQKS
         +GV QK+
Subjt:  TVGVRQKS

XP_008442502.1 PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo]2.0e-5292.52Show/hide
Query:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSIEE
        MLEGKAVVRETDMP+GIQ HVLELAYKALDQHEVSDCQSIA FIKQRFDEAYGPAWHCV GKAFGGCITHLCGSFIFFHVDTMEFL+FKDGRDCSKS+EE
Subjt:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSIEE

Query:  TVGVRQK
        TVGV +K
Subjt:  TVGVRQK

XP_022145583.1 dynein light chain-like [Momordica charantia]1.5e-5294.44Show/hide
Query:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSIEE
        MLEGKA VRETDMPEGIQ HVLELAYKALD HEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVD MEFLIFKDGRD SKSIEE
Subjt:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSIEE

Query:  TVGVRQKS
        T+GVRQKS
Subjt:  TVGVRQKS

TrEMBL top hitse value%identityAlignment
A0A0A0LA26 Dynein light chain1.1e-5190.65Show/hide
Query:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSIEE
        MLEGKAVVRETDMP+GIQ HVLELAYKALDQHEVSDCQSIA FIKQRFDEAYGPAWHCV GKAFGGCITHLCGS+IFFHVDTMEFL+FKDGRDC KS+EE
Subjt:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSIEE

Query:  TVGVRQK
        TVGV +K
Subjt:  TVGVRQK

A0A1S3B5U2 Dynein light chain9.5e-5392.52Show/hide
Query:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSIEE
        MLEGKAVVRETDMP+GIQ HVLELAYKALDQHEVSDCQSIA FIKQRFDEAYGPAWHCV GKAFGGCITHLCGSFIFFHVDTMEFL+FKDGRDCSKS+EE
Subjt:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSIEE

Query:  TVGVRQK
        TVGV +K
Subjt:  TVGVRQK

A0A2P5EZ32 Dynein light chain1.4e-4376.85Show/hide
Query:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSIEE
        MLEGKAVVRETDMPE +Q HV+ELAYKALD HEVSDCQSIA +IKQ+FDE YGPAW+CVVGK FG CITHLCGSFIFFHV+ MEFLIFKDG+D +++++E
Subjt:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSIEE

Query:  TVGVRQKS
         +GV QK+
Subjt:  TVGVRQKS

A0A5J4ZMN8 Dynein light chain1.8e-4377.57Show/hide
Query:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSIEE
        MLEGKAV+RETDMPE +Q HV+ELAY+ALD HE SDCQSIA +IKQ+FDEAYGPAWHCVVGK FG CITHLCGSFIFF VD MEFL+FKDG+D ++S EE
Subjt:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSIEE

Query:  TVGVRQK
         +GV QK
Subjt:  TVGVRQK

A0A6J1CWC6 Dynein light chain7.3e-5394.44Show/hide
Query:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSIEE
        MLEGKA VRETDMPEGIQ HVLELAYKALD HEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVD MEFLIFKDGRD SKSIEE
Subjt:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSIEE

Query:  TVGVRQKS
        T+GVRQKS
Subjt:  TVGVRQKS

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm1.2e-1540.66Show/hide
Query:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDG
        M E KAV++  DMPE +Q   ++ A +AL++  +   + IA +IK+ FD+ Y P WHC+VG+ FG  +TH    FI+F++  +  L+FK G
Subjt:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDG

O96860 Dynein light chain 2, cytoplasmic4.4e-1539.56Show/hide
Query:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDG
        M + KAV++  DM E +Q   ++ A +AL+++ +   + IA FIK+ FD+ Y P WHC+VG+ FG  +TH    FI+F++  +  L+FK G
Subjt:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDG

Q22799 Dynein light chain 1, cytoplasmic5.8e-1537.36Show/hide
Query:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDG
        M++ KAV++  DM + +Q   ++ A +AL+++ +   + IA +IK+ FD+ Y P WHC+VG+ FG  +TH    FI+F++  +  L+FK G
Subjt:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDG

Q94748 Probable dynein light chain9.0e-1642.86Show/hide
Query:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDG
        M E KAV++  DM E +Q   +  A  ALD++E+   + +A +IK+ FD  Y P WHC+VGK FG  +TH    FI+F++    FL+FK G
Subjt:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDG

Q94758 Dynein light chain4.0e-1642.86Show/hide
Query:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDG
        M E KAV++  DM E +Q   + +A  A+D+H++   + IA  IK+ FD  Y P WHC+VG+ FG  +TH   +FI+F++D   FL+FK G
Subjt:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDG

Arabidopsis top hitse value%identityAlignment
AT1G52240.2 RHO guanyl-nucleotide exchange factor 111.1e-2152.81Show/hide
Query:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFK
        MLEGKA+V ++DMP  +Q   +  A +ALD  +V DC+SIA  IK+ FDE YG  W CVVG  FG   TH  G+FI+F ++T++FLIFK
Subjt:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFK

AT3G16120.1 Dynein light chain type 1 family protein4.3e-2153.93Show/hide
Query:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFK
        MLEGKA V ETDMP  +Q   +++A ++LD  +V D  SIA  IK+ FDE YG  W CVVG  FG   TH  G+FI+FH+ T+ FLIFK
Subjt:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFK

AT4G15930.1 Dynein light chain type 1 family protein1.0e-1436.78Show/hide
Query:  KAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDG
        +AV++  DM + +Q   +E+A  A +++ V   + IA  IK+ FD+ +G  WHC+VG+ FG  +TH    F++F++D    L+FK G
Subjt:  KAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDG

AT4G27360.1 Dynein light chain type 1 family protein1.4e-1949.44Show/hide
Query:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFK
        MLEGKAV+ +TDM + ++   L LA KALD  +V++   IARFIK+ FD +YG  W C+VG  FG  +TH  G FI F V ++  L+FK
Subjt:  MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFK

AT5G20110.1 Dynein light chain type 1 family protein6.0e-1543.59Show/hide
Query:  DMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFK
        DMP  +Q H    A   LD  E    + +A  +K+ FD+ YGPAWHC+VG +FG  +TH  G FI+F +D +  L+FK
Subjt:  DMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAGGGCAAAGCTGTGGTCCGCGAAACAGACATGCCAGAAGGGATCCAGGGCCATGTCCTTGAGTTGGCTTATAAAGCACTTGATCAACACGAAGTTTCCGACTG
TCAATCCATTGCACGTTTCATCAAACAGAGGTTTGACGAAGCTTATGGCCCGGCATGGCATTGTGTGGTGGGCAAAGCGTTTGGAGGTTGCATTACGCATTTATGTGGTA
GTTTCATCTTCTTCCATGTGGATACGATGGAGTTTCTCATCTTTAAGGACGGAAGAGACTGCTCCAAAAGCATTGAAGAGACCGTTGGAGTTCGCCAGAAAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAGGGCAAAGCTGTGGTCCGCGAAACAGACATGCCAGAAGGGATCCAGGGCCATGTCCTTGAGTTGGCTTATAAAGCACTTGATCAACACGAAGTTTCCGACTG
TCAATCCATTGCACGTTTCATCAAACAGAGGTTTGACGAAGCTTATGGCCCGGCATGGCATTGTGTGGTGGGCAAAGCGTTTGGAGGTTGCATTACGCATTTATGTGGTA
GTTTCATCTTCTTCCATGTGGATACGATGGAGTTTCTCATCTTTAAGGACGGAAGAGACTGCTCCAAAAGCATTGAAGAGACCGTTGGAGTTCGCCAGAAAAGTTAA
Protein sequenceShow/hide protein sequence
MLEGKAVVRETDMPEGIQGHVLELAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSIEETVGVRQKS