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Tan0015994 (gene) of Snake gourd v1 genome

Gene IDTan0015994
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 10
Genome locationLG09:42795398..42799385
RNA-Seq ExpressionTan0015994
SyntenyTan0015994
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020864.1 hypothetical protein SDJN02_17552, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-0650Show/hide
Query:  VLISIMLVTRQEVAADKTYLKLVDWNQPNPPPSCSSPNGEGFTPVSANAYTRGCSAINRCHG
        V+ + M++T  EV AD+ +LKL +   PNPP  C + N  GF PV AN Y RGCSA +RC G
Subjt:  VLISIMLVTRQEVAADKTYLKLVDWNQPNPPPSCSSPNGEGFTPVSANAYTRGCSAINRCHG
XP_022947821.1 protein RALF-like 10 [Cucurbita moschata]1.7e-0754.29Show/hide
Query:  QSWLICFVLISIMLVTRQEVAADKTYLKLVD-WNQPNPPPSCSSPNGEGFTPVSANAYTRGCSAINRCHG
        +SWLIC VLI  MLV  Q+VA++  +LK  D   QPNPPP CS  N      V AN Y RGCS I RC G
Subjt:  QSWLICFVLISIMLVTRQEVAADKTYLKLVD-WNQPNPPPSCSSPNGEGFTPVSANAYTRGCSAINRCHG
XP_023533089.1 protein RALF-like 10 [Cucurbita pepo subsp. pepo]3.7e-0755.71Show/hide
Query:  QSWLICFVLISIMLVTRQEVAADKTYLKLVD-WNQPNPPPSCSSPNGEGFTPVSANAYTRGCSAINRCHG
        +SWLIC VLIS MLV  QEVA++  +LK  D   QPNPP  CS  N      V AN Y RGCS I RC G
Subjt:  QSWLICFVLISIMLVTRQEVAADKTYLKLVD-WNQPNPPPSCSSPNGEGFTPVSANAYTRGCSAINRCHG
XP_038877580.1 protein RALF-like 11 [Benincasa hispida]5.1e-0957.14Show/hide
Query:  QSWLICFVLISIMLVTRQEVAADKTYLKLVD-WNQPNPPPSCSSPNGEGFTPVSANAYTRGCSAINRCHG
        +SWLIC V IS MLV    VAA+K YL+ +D  NQPNPPP+CS    +    V AN Y RGCSAI+RC G
Subjt:  QSWLICFVLISIMLVTRQEVAADKTYLKLVD-WNQPNPPPSCSSPNGEGFTPVSANAYTRGCSAINRCHG
TrEMBL top hitse value%identityAlignment
A0A0A0LI94 Uncharacterized protein3.6e-0855.71Show/hide
Query:  QSWLICFVLISIMLVTRQEVAADKTYLKLVD-WNQPNPPPSCSSPNGEGFTPVSANAYTRGCSAINRCHG
        +SWLIC  LI  MLV  QEVAA+  +LK +D  NQP+PPP+C  PN +      AN Y R CSAINRC G
Subjt:  QSWLICFVLISIMLVTRQEVAADKTYLKLVD-WNQPNPPPSCSSPNGEGFTPVSANAYTRGCSAINRCHG
A0A0A0M0X3 Uncharacterized protein9.8e-0651.43Show/hide
Query:  QSWLICFVLISIMLVTRQEVAADKTYLKLVD-WNQPNPPPSCSSPNGEGFTPVSANAYTRGCSAINRCHG
        +SWLIC V IS MLV  QEV A   +LK  +  + P+PPPSCSS   +       N Y RGCSAI+RC G
Subjt:  QSWLICFVLISIMLVTRQEVAADKTYLKLVD-WNQPNPPPSCSSPNGEGFTPVSANAYTRGCSAINRCHG
A0A6J1G7J2 protein RALF-like 108.0e-0854.29Show/hide
Query:  QSWLICFVLISIMLVTRQEVAADKTYLKLVD-WNQPNPPPSCSSPNGEGFTPVSANAYTRGCSAINRCHG
        +SWLIC VLI  MLV  Q+VA++  +LK  D   QPNPPP CS  N      V AN Y RGCS I RC G
Subjt:  QSWLICFVLISIMLVTRQEVAADKTYLKLVD-WNQPNPPPSCSSPNGEGFTPVSANAYTRGCSAINRCHG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G25165.1 ralf-like 257.4e-0642.86Show/hide
Query:  MKQSWLICFVLISIMLVTRQEVAADK-TYLKLVDWNQPNPPPSCSSPNGEGFTPVSANAYTRGCSAINRC
        MK   +I  V+ SI++V R E   +K  YL L    +PN PP C     +  TPV  N Y+RGC+ INRC
Subjt:  MKQSWLICFVLISIMLVTRQEVAADK-TYLKLVDWNQPNPPPSCSSPNGEGFTPVSANAYTRGCSAINRC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAGTCATGGCTCATTTGTTTTGTTCTTATTAGCATCATGTTGGTGACACGACAAGAAGTAGCAGCGGACAAAACTTATCTTAAACTAGTGGATTGGAACCAACC
AAACCCACCACCAAGTTGTTCTTCACCGAATGGAGAAGGTTTTACACCTGTTTCTGCTAATGCCTATACTCGAGGTTGCTCTGCCATCAATCGTTGTCATGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAGTCATGGCTCATTTGTTTTGTTCTTATTAGCATCATGTTGGTGACACGACAAGAAGTAGCAGCGGACAAAACTTATCTTAAACTAGTGGATTGGAACCAACC
AAACCCACCACCAAGTTGTTCTTCACCGAATGGAGAAGGTTTTACACCTGTTTCTGCTAATGCCTATACTCGAGGTTGCTCTGCCATCAATCGTTGTCATGGATGA
Protein sequenceShow/hide protein sequence
MKQSWLICFVLISIMLVTRQEVAADKTYLKLVDWNQPNPPPSCSSPNGEGFTPVSANAYTRGCSAINRCHG