; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016016 (gene) of Snake gourd v1 genome

Gene IDTan0016016
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationLG01:36325179..36325526
RNA-Seq ExpressionTan0016016
SyntenyTan0016016
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034014.1 uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa]3.5e-1545.05Show/hide
Query:  MNLMFSIAMPIPNLVHLYINVRRINVNVQRFEETSIQSVDPSLGVESNQCLDLDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVYDIPSN
        MN MFSIA+P PN+VHLY+ V  ++  +         +V+P       + +D++P+    P C +E+MV  N Y EFRTETDDEFEE+DF+   Y++PSN
Subjt:  MNLMFSIAMPIPNLVHLYINVRRINVNVQRFEETSIQSVDPSLGVESNQCLDLDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVYDIPSN

Query:  TFNELDNNVLD
        TF +LD N +D
Subjt:  TFNELDNNVLD

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.5e-1545.05Show/hide
Query:  MNLMFSIAMPIPNLVHLYINVRRINVNVQRFEETSIQSVDPSLGVESNQCLDLDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVYDIPSN
        MN MFSIA+P PN+VHLY+ V  ++  +         +V+P       + +D++P+    P C +E+MV  N Y EFRTETDDEFEE+DF+   Y++PSN
Subjt:  MNLMFSIAMPIPNLVHLYINVRRINVNVQRFEETSIQSVDPSLGVESNQCLDLDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVYDIPSN

Query:  TFNELDNNVLD
        TF +LD N +D
Subjt:  TFNELDNNVLD

TYK01570.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.6e-1545.69Show/hide
Query:  MNLMFSIAMPIPNLVHLYINVRR----INVNVQ-RFEETSIQSVDPSLGVESNQCLDLDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVY
        MN MFS+A+P PN+VHLY+ V      IN+NV+ R+ E               + +D++P+    P C +E+MV  N Y EFRTETDDEFEE+DF+   Y
Subjt:  MNLMFSIAMPIPNLVHLYINVRR----INVNVQ-RFEETSIQSVDPSLGVESNQCLDLDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVY

Query:  DIPSNTFNELDNNVLD
        ++PSNTF +LD N +D
Subjt:  DIPSNTFNELDNNVLD

TYK11154.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.0e-1443.24Show/hide
Query:  MNLMFSIAMPIPNLVHLYINVRRINVNVQRFEETSIQSVDPSLGVESNQCLDLDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVYDIPSN
        MN MFSIA+P PN+VHLY+ V  +++ +    E               + +D+D ++   P C +E+MV  N Y EFRTETDDEFEE+DF+   Y++PSN
Subjt:  MNLMFSIAMPIPNLVHLYINVRRINVNVQRFEETSIQSVDPSLGVESNQCLDLDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVYDIPSN

Query:  TFNELDNNVLD
        TF +LD + +D
Subjt:  TFNELDNNVLD

TYK23115.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]7.8e-1544.64Show/hide
Query:  MNLMFSIAMPIPNLVHLYINVRRINVNVQRFEETSIQSVDPSLGVESNQCLDLDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVYDIPSN
        MN MFSIA+P PN+VHLY+ V  +++ +         +V+P       + +D+D +    P C +E+MV  N Y EFRTETDDEFEE+DF+   Y++PSN
Subjt:  MNLMFSIAMPIPNLVHLYINVRRINVNVQRFEETSIQSVDPSLGVESNQCLDLDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVYDIPSN

Query:  TFNELDNNVLDN
        TF +LD N +D+
Subjt:  TFNELDNNVLDN

TrEMBL top hitse value%identityAlignment
A0A5A7SS31 DBD_Tnp_Mut domain-containing protein1.7e-1545.05Show/hide
Query:  MNLMFSIAMPIPNLVHLYINVRRINVNVQRFEETSIQSVDPSLGVESNQCLDLDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVYDIPSN
        MN MFSIA+P PN+VHLY+ V  ++  +         +V+P       + +D++P+    P C +E+MV  N Y EFRTETDDEFEE+DF+   Y++PSN
Subjt:  MNLMFSIAMPIPNLVHLYINVRRINVNVQRFEETSIQSVDPSLGVESNQCLDLDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVYDIPSN

Query:  TFNELDNNVLD
        TF +LD N +D
Subjt:  TFNELDNNVLD

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein1.7e-1545.05Show/hide
Query:  MNLMFSIAMPIPNLVHLYINVRRINVNVQRFEETSIQSVDPSLGVESNQCLDLDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVYDIPSN
        MN MFSIA+P PN+VHLY+ V  ++  +         +V+P       + +D++P+    P C +E+MV  N Y EFRTETDDEFEE+DF+   Y++PSN
Subjt:  MNLMFSIAMPIPNLVHLYINVRRINVNVQRFEETSIQSVDPSLGVESNQCLDLDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVYDIPSN

Query:  TFNELDNNVLD
        TF +LD N +D
Subjt:  TFNELDNNVLD

A0A5D3BR52 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.2e-1545.69Show/hide
Query:  MNLMFSIAMPIPNLVHLYINVRR----INVNVQ-RFEETSIQSVDPSLGVESNQCLDLDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVY
        MN MFS+A+P PN+VHLY+ V      IN+NV+ R+ E               + +D++P+    P C +E+MV  N Y EFRTETDDEFEE+DF+   Y
Subjt:  MNLMFSIAMPIPNLVHLYINVRR----INVNVQ-RFEETSIQSVDPSLGVESNQCLDLDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVY

Query:  DIPSNTFNELDNNVLD
        ++PSNTF +LD N +D
Subjt:  DIPSNTFNELDNNVLD

A0A5D3CIZ8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.4e-1443.24Show/hide
Query:  MNLMFSIAMPIPNLVHLYINVRRINVNVQRFEETSIQSVDPSLGVESNQCLDLDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVYDIPSN
        MN MFSIA+P PN+VHLY+ V  +++ +    E               + +D+D ++   P C +E+MV  N Y EFRTETDDEFEE+DF+   Y++PSN
Subjt:  MNLMFSIAMPIPNLVHLYINVRRINVNVQRFEETSIQSVDPSLGVESNQCLDLDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVYDIPSN

Query:  TFNELDNNVLD
        TF +LD + +D
Subjt:  TFNELDNNVLD

A0A5D3DHR2 GATA zinc finger domain-containing protein 10-like isoform X23.8e-1544.64Show/hide
Query:  MNLMFSIAMPIPNLVHLYINVRRINVNVQRFEETSIQSVDPSLGVESNQCLDLDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVYDIPSN
        MN MFSIA+P PN+VHLY+ V  +++ +         +V+P       + +D+D +    P C +E+MV  N Y EFRTETDDEFEE+DF+   Y++PSN
Subjt:  MNLMFSIAMPIPNLVHLYINVRRINVNVQRFEETSIQSVDPSLGVESNQCLDLDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVYDIPSN

Query:  TFNELDNNVLDN
        TF +LD N +D+
Subjt:  TFNELDNNVLDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTTAATGTTCTCAATTGCGATGCCAATCCCAAATTTAGTACATTTATATATCAATGTAAGAAGGATCAATGTGAATGTACAAAGGTTTGAAGAAACGTCTATTCA
ATCTGTTGATCCTAGCCTAGGTGTTGAATCCAACCAATGTCTTGACCTAGATCCTCAAATAGTTGGTACACCGTGTGATGATGAAGATATGGTTACAAATAATACATATA
AAGAGTTTAGAACTGAAACAGATGATGAATTTGAAGAGTTGGATTTTGAGAATAGTGTATATGACATCCCTTCAAACACATTTAATGAGTTGGATAACAATGTATTAGAT
AACACTACAAGAACATGA
mRNA sequenceShow/hide mRNA sequence
ATGAACTTAATGTTCTCAATTGCGATGCCAATCCCAAATTTAGTACATTTATATATCAATGTAAGAAGGATCAATGTGAATGTACAAAGGTTTGAAGAAACGTCTATTCA
ATCTGTTGATCCTAGCCTAGGTGTTGAATCCAACCAATGTCTTGACCTAGATCCTCAAATAGTTGGTACACCGTGTGATGATGAAGATATGGTTACAAATAATACATATA
AAGAGTTTAGAACTGAAACAGATGATGAATTTGAAGAGTTGGATTTTGAGAATAGTGTATATGACATCCCTTCAAACACATTTAATGAGTTGGATAACAATGTATTAGAT
AACACTACAAGAACATGA
Protein sequenceShow/hide protein sequence
MNLMFSIAMPIPNLVHLYINVRRINVNVQRFEETSIQSVDPSLGVESNQCLDLDPQIVGTPCDDEDMVTNNTYKEFRTETDDEFEELDFENSVYDIPSNTFNELDNNVLD
NTTRT