; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016026 (gene) of Snake gourd v1 genome

Gene IDTan0016026
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionclp protease adapter protein ClpF, chloroplastic
Genome locationLG02:91500132..91502568
RNA-Seq ExpressionTan0016026
SyntenyTan0016026
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009840 - chloroplastic endopeptidase Clp complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR001943 - UVR domain
IPR011722 - Hemimethylated DNA-binding domain
IPR036623 - Hemimethylated DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064751.1 UvrB/uvrC motif-containing protein isoform 1 [Cucumis melo var. makuwa]2.1e-16990.53Show/hide
Query:  MVQDLSIHTLTALGDPKVYGSTLSWRKN---FKQTRPTQLTSRECFWHQCMRSFSLTSQPCRSKRGNFKVKAGWLFRGGGQGLGARIERSENANNDILIF
        MVQDLSIH +TALGDP VYGS LSWR+N   FKQT  TQLTSR+CFWHQCMRSFSLTSQPCRSKRG+FK++AGWLF+GGGQ  G RIERSENANNDILIF
Subjt:  MVQDLSIHTLTALGDPKVYGSTLSWRKN---FKQTRPTQLTSRECFWHQCMRSFSLTSQPCRSKRGNFKVKAGWLFRGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAEIIKQQESK+GLTSKSEVQDKGLNIIRLRADLQ AIESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFY
        AYESAEYSFRLGQKVRHKIFGY GVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYV EENLL PEEPD ERFDHPY+SFLFY
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRYEVPSDPQDDEQRSDD
        GVD+AGDFIPIKQLREKYNRPR+E+P DPQDDEQ+ DD
Subjt:  GVDTAGDFIPIKQLREKYNRPRYEVPSDPQDDEQRSDD

KAG6598627.1 Clp protease adapter protein ClpF, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.6e-16991.69Show/hide
Query:  MVQDLSIHTLTALGDPKVYGSTLSWRKNFKQTR-PTQLTSRECFWHQCMRSFSLTSQPCRSKRGNFKVKAGWLFRGGGQGLGARIERSENANNDILIFFF
        MVQDLSIH LTALGDPKVYGSTLSWRKNFKQT  PT LTSR+ FWHQ MRSFSL SQPCRSKRGNFKVKAGWLFRGGGQGL ARIERSENANNDILIFFF
Subjt:  MVQDLSIHTLTALGDPKVYGSTLSWRKNFKQTR-PTQLTSRECFWHQCMRSFSLTSQPCRSKRGNFKVKAGWLFRGGGQGLGARIERSENANNDILIFFF

Query:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAY
        QLDLATRVQYALNIEQYEIAQELRTKLTEVE E+IKQQESKRGLTSKSEVQDKGL+IIRLRADLQ AIESENY  AAQLRD+ISKLETESLAASAKVLAY
Subjt:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAY

Query:  ESAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFYGV
        ESAEYSFRLGQK RHKIFGYRGV+CGMDPVCCESSSWMEIAQVEKLSRG NQPFYQVLVDVRT+PDLLVAYV EENLLVPEEPD ERFDHPYNSFLFYGV
Subjt:  ESAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFYGV

Query:  DTAGDFIPIKQLREKYNRPRYEVPSDPQ-DDEQRSDD
        D+AGDFIP+KQLREKYNRPR+EVP DPQ DDEQR DD
Subjt:  DTAGDFIPIKQLREKYNRPRYEVPSDPQ-DDEQRSDD

KAG7029563.1 Clp protease adapter protein ClpF, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-16991.69Show/hide
Query:  MVQDLSIHTLTALGDPKVYGSTLSWRKNFKQTR-PTQLTSRECFWHQCMRSFSLTSQPCRSKRGNFKVKAGWLFRGGGQGLGARIERSENANNDILIFFF
        MVQDLSIH LTALGDPKVYGSTLSWRKNFKQT  PT LTSR+ FWHQ MRSFSL SQPCRSKRGNFKVKAGWLFRGGGQGL ARIERSENANNDILIFFF
Subjt:  MVQDLSIHTLTALGDPKVYGSTLSWRKNFKQTR-PTQLTSRECFWHQCMRSFSLTSQPCRSKRGNFKVKAGWLFRGGGQGLGARIERSENANNDILIFFF

Query:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAY
        QLDLATRVQYALNIEQYEIAQELRTKLTEVE E+IKQQESKRGLTSKSEVQDKGL+IIRLRADLQ AIESENY  AAQLRD+ISKLETESLAASAKVLAY
Subjt:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAY

Query:  ESAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFYGV
        ESAEYSFRLGQK RHKIFGYRGV+CGMDPVCCESSSWMEIAQVEKLSRG NQPFYQVLVDVRT+PDLLVAYV EENLLVPEEPD ERFDHPYNSFLFYGV
Subjt:  ESAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFYGV

Query:  DTAGDFIPIKQLREKYNRPRYEVPSDPQ-DDEQRSDD
        D+AGDFIP+KQLREKYNRPR+EVP DPQ DDEQR DD
Subjt:  DTAGDFIPIKQLREKYNRPRYEVPSDPQ-DDEQRSDD

XP_008445473.1 PREDICTED: uncharacterized protein LOC103488481 [Cucumis melo]1.6e-16990.83Show/hide
Query:  MVQDLSIHTLTALGDPKVYGSTLSWRKN---FKQTRPTQLTSRECFWHQCMRSFSLTSQPCRSKRGNFKVKAGWLFRGGGQGLGARIERSENANNDILIF
        MVQDLSIH +TALGDP VYGS LSWR+N   FKQT  TQLTSR+CFWHQCMRSFSLTSQPCRSKRG+FK++AGWLF+GGGQ  G RIERSENANNDILIF
Subjt:  MVQDLSIHTLTALGDPKVYGSTLSWRKN---FKQTRPTQLTSRECFWHQCMRSFSLTSQPCRSKRGNFKVKAGWLFRGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAEIIKQQESK+GLTSKSEVQDKGLNIIRLRADLQ AIESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFY
        AYESAEYSFRLGQKVRHKIFGY GVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYV EENLL PEEPD ERFDHPY+SFLFY
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRYEVPSDPQDDEQRSDD
        GVD+AGDFIPIKQLREKYNRPR+EVP DPQDDEQ+ DD
Subjt:  GVDTAGDFIPIKQLREKYNRPRYEVPSDPQDDEQRSDD

XP_038886599.1 clp protease adapter protein ClpF, chloroplastic [Benincasa hispida]1.4e-17393.49Show/hide
Query:  MVQDLSIHTLTALGDPKVYGSTLSWRKN---FKQTRPTQLTSRECFWHQCMRSFSLTSQPCRSKRGNFKVKAGWLFRGGGQGLGARIERSENANNDILIF
        MVQDLSIH LTALGDPKVYGS LSWR+N   FKQT  TQLTSR+CFW+QCMRSFSLTSQPC  KRGNFKVKAGWLF+GGGQ LG RIERSENANNDILIF
Subjt:  MVQDLSIHTLTALGDPKVYGSTLSWRKN---FKQTRPTQLTSRECFWHQCMRSFSLTSQPCRSKRGNFKVKAGWLFRGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQ A+ESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFY
        AYESAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYV EENLLVPEEPD E FDHPYNSFLFY
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRYEVPSDPQDDEQRSDD
        GVDTAGDFIPIKQLREKYNRPRYEVP DPQDDEQR DD
Subjt:  GVDTAGDFIPIKQLREKYNRPRYEVPSDPQDDEQRSDD

TrEMBL top hitse value%identityAlignment
A0A1S3BCC1 uncharacterized protein LOC1034884817.8e-17090.83Show/hide
Query:  MVQDLSIHTLTALGDPKVYGSTLSWRKN---FKQTRPTQLTSRECFWHQCMRSFSLTSQPCRSKRGNFKVKAGWLFRGGGQGLGARIERSENANNDILIF
        MVQDLSIH +TALGDP VYGS LSWR+N   FKQT  TQLTSR+CFWHQCMRSFSLTSQPCRSKRG+FK++AGWLF+GGGQ  G RIERSENANNDILIF
Subjt:  MVQDLSIHTLTALGDPKVYGSTLSWRKN---FKQTRPTQLTSRECFWHQCMRSFSLTSQPCRSKRGNFKVKAGWLFRGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAEIIKQQESK+GLTSKSEVQDKGLNIIRLRADLQ AIESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFY
        AYESAEYSFRLGQKVRHKIFGY GVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYV EENLL PEEPD ERFDHPY+SFLFY
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRYEVPSDPQDDEQRSDD
        GVD+AGDFIPIKQLREKYNRPR+EVP DPQDDEQ+ DD
Subjt:  GVDTAGDFIPIKQLREKYNRPRYEVPSDPQDDEQRSDD

A0A5A7VGB7 UvrB/uvrC motif-containing protein isoform 11.0e-16990.53Show/hide
Query:  MVQDLSIHTLTALGDPKVYGSTLSWRKN---FKQTRPTQLTSRECFWHQCMRSFSLTSQPCRSKRGNFKVKAGWLFRGGGQGLGARIERSENANNDILIF
        MVQDLSIH +TALGDP VYGS LSWR+N   FKQT  TQLTSR+CFWHQCMRSFSLTSQPCRSKRG+FK++AGWLF+GGGQ  G RIERSENANNDILIF
Subjt:  MVQDLSIHTLTALGDPKVYGSTLSWRKN---FKQTRPTQLTSRECFWHQCMRSFSLTSQPCRSKRGNFKVKAGWLFRGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAEIIKQQESK+GLTSKSEVQDKGLNIIRLRADLQ AIESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFY
        AYESAEYSFRLGQKVRHKIFGY GVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYV EENLL PEEPD ERFDHPY+SFLFY
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRYEVPSDPQDDEQRSDD
        GVD+AGDFIPIKQLREKYNRPR+E+P DPQDDEQ+ DD
Subjt:  GVDTAGDFIPIKQLREKYNRPRYEVPSDPQDDEQRSDD

A0A6J1BRG5 clp protease adapter protein ClpF, chloroplastic2.5e-16891.04Show/hide
Query:  MVQDLSIHTLTALGDPKVYGSTLSWRKNFKQTRPTQLTSRECFWHQCMRSFSLTSQPCRSKRGNFKVKAGWLFRGGGQGLGARIERSENANNDILIFFFQ
        MVQD+SIH L ALGDPKVYGSTL WRKNFKQT   QL S  CF HQ +RSFSLTSQP R +RGNFK KAGWLF+GGGQGLGARIERSENANNDILIFFFQ
Subjt:  MVQDLSIHTLTALGDPKVYGSTLSWRKNFKQTRPTQLTSRECFWHQCMRSFSLTSQPCRSKRGNFKVKAGWLFRGGGQGLGARIERSENANNDILIFFFQ

Query:  LDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYE
        LDLATRVQYALNIEQYEIAQ+LRTKLTEVE EIIKQQESK GLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRD+ISKLETESLAASA VLAYE
Subjt:  LDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYE

Query:  SAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFYGVD
        +AEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRT+PDLLVAYVPEENLL PEEPD ERFDHPYNSFLFYGVD
Subjt:  SAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFYGVD

Query:  TAGDFIPIKQLREKYNRPRYEVPSDPQDDEQRSDD
         AGDFIPIKQLREKYNRPR+EVPSDPQDDEQR DD
Subjt:  TAGDFIPIKQLREKYNRPRYEVPSDPQDDEQRSDD

A0A6J1HFJ3 clp protease adapter protein ClpF, chloroplastic8.6e-16991.39Show/hide
Query:  MVQDLSIHTLTALGDPKVYGSTLSWRKNFKQTR-PTQLTSRECFWHQCMRSFSLTSQPCRSKRGNFKVKAGWLFRGGGQGLGARIERSENANNDILIFFF
        MVQDLSIH LTALGDPKVYGSTLSWRKNFKQT  PT LTSR+ FWHQ MRSFSL SQPCR KRGNFKVKAGWLFRGGGQGL ARIERSENANNDILIFFF
Subjt:  MVQDLSIHTLTALGDPKVYGSTLSWRKNFKQTR-PTQLTSRECFWHQCMRSFSLTSQPCRSKRGNFKVKAGWLFRGGGQGLGARIERSENANNDILIFFF

Query:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAY
        QLDLATRVQYALNIEQYEIAQELRTKLTEVE E+IKQQESKRGLTSKSEVQDKGL+IIRLRADLQ AIESENY  AAQLRD+ISKLETESLAASAKVLAY
Subjt:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAY

Query:  ESAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFYGV
        ESAEYSFRLGQK RHKIFGYRGV+CGMDPVCCESSSWMEIAQVEKLSRG NQPFYQVLVDVRT+PDLLVAYV EENLLVPEEPD ERFDHPYNSFLFYGV
Subjt:  ESAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFYGV

Query:  DTAGDFIPIKQLREKYNRPRYEVPSDPQ-DDEQRSDD
        D+AGDFIP+KQLREKYNRPR+EVP DPQ DDEQR DD
Subjt:  DTAGDFIPIKQLREKYNRPRYEVPSDPQ-DDEQRSDD

A0A6J1KAU5 clp protease adapter protein ClpF, chloroplastic isoform X28.6e-16990.48Show/hide
Query:  MVQDLSIHTLTALGDPKVYGSTLSWRKNFKQTRPTQLTSRECFWHQCMRSFSLTSQPCRSKRGNFKVKAGWLFRGGGQGLGARIERSENANNDILIFFFQ
        MVQDLSIH+LT+LGDPKVYGS LSWR+NFKQT PT LTSR+ FWHQ MRSFSL SQPCRSKRGNFKVKAGWLFRGGGQGL ARIERSENANNDILIFFFQ
Subjt:  MVQDLSIHTLTALGDPKVYGSTLSWRKNFKQTRPTQLTSRECFWHQCMRSFSLTSQPCRSKRGNFKVKAGWLFRGGGQGLGARIERSENANNDILIFFFQ

Query:  LDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYE
        LDLATRVQYALNIEQYEIAQELRTKLTEVEAE+IKQQESKRGLTSKSEVQDKGL+IIRLRADLQ AIESENY  AAQLRD+ISKLETESLAASAKVLAYE
Subjt:  LDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYE

Query:  SAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFYGVD
        SAEY+FRLGQK +HKIFGYRGV+CGMDPVCCE+SSWMEIAQVEKLSRGSNQPFYQVLVDVRT+PDLLVAYV EENLLVPEEPD ERFDHPYNSFLFYGVD
Subjt:  SAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFYGVD

Query:  TAGDFIPIKQLREKYNRPRYEVPSDPQ-DDEQRSDD
        TAGDFIP++QLREKYNRPR+EVP D Q DDEQR DD
Subjt:  TAGDFIPIKQLREKYNRPRYEVPSDPQ-DDEQRSDD

SwissProt top hitse value%identityAlignment
O94952 F-box only protein 212.1e-0725.45Show/hide
Query:  LNIIRLRADLQNAIESENYALAAQLRDEISKLE--TESLAASAKVLAYES-AEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSN
        L ++ +   +Q     ++ A+   ++  +  +E   E +    K+ + E   +  + +G  ++HK +GY  V+ G DP C     W+    V  L  G +
Subjt:  LNIIRLRADLQNAIESENYALAAQLRDEISKLE--TESLAASAKVLAYES-AEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSN

Query:  QPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFYGVDTAGDFIPIKQLREKY
        QPFY VLV+     D    Y  +ENL    EP  +   HP +   ++   T   +IP  +L  +Y
Subjt:  QPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFYGVDTAGDFIPIKQLREKY

Q5R5S1 F-box only protein 213.3e-0831.82Show/hide
Query:  FRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFYGVDTAGDF
        + +G  ++HK +GY  V+ G DP C     W+    V  L  G +QPFY VLV+     D    Y  +ENL    EP  +   HP +   ++   T   +
Subjt:  FRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFYGVDTAGDF

Query:  IPIKQLREKY
        IP  +L  +Y
Subjt:  IPIKQLREKY

Q67Y99 Clp protease adapter protein ClpF, chloroplastic1.6e-11667.57Show/hide
Query:  MVQDLSIHTLTALGDPKVYGSTLSWRKNFKQTRPTQLTSRECFWHQCMRSFSLTSQPCRS--KRGNFKVKAGWLFRGGG-QGLGARIERSENANNDILIF
        MVQ  S+ TLT  G  KV  S+L  R      + + L    C   Q +R         +S  +R   +V+A W F+GGG QGL    ERSE+AN DILIF
Subjt:  MVQDLSIHTLTALGDPKVYGSTLSWRKNFKQTRPTQLTSRECFWHQCMRSFSLTSQPCRS--KRGNFKVKAGWLFRGGG-QGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYA+N+EQY+IAQ+LR KLTEVE E I+ QE KRG ++KSE QDKG++IIRLRADLQNAI+SE+Y LAA+LRDEISKLE ESLA SAK L
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFY
        A+E AEY+FRLGQK+RHK FGYR VVCGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYV E+NLL PE+PDKERFDHPY SFL+Y
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRYEVPSDPQDDE
        G DTAGDFIP+KQLREKYNRPR+EVP D QD++
Subjt:  GVDTAGDFIPIKQLREKYNRPRYEVPSDPQDDE

Q8VDH1 F-box only protein 211.3e-0725.45Show/hide
Query:  LNIIRLRADLQNAIESENYALAAQLRDEISKLE--TESLAASAKVLAYES-AEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSN
        L ++ +   +Q     ++ A+   ++  +  +E   E +    K+ + E   +  + +G  ++HK +GY  V+ G DP C     W+    V  L  G +
Subjt:  LNIIRLRADLQNAIESENYALAAQLRDEISKLE--TESLAASAKVLAYES-AEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSN

Query:  QPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFYGVDTAGDFIPIKQLREKY
        QPFY VLV+     D    Y  +ENL    EP  +   HP +   ++   T   +IP  +L  +Y
Subjt:  QPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFYGVDTAGDFIPIKQLREKY

Arabidopsis top hitse value%identityAlignment
AT2G03390.1 uvrB/uvrC motif-containing protein1.2e-11767.57Show/hide
Query:  MVQDLSIHTLTALGDPKVYGSTLSWRKNFKQTRPTQLTSRECFWHQCMRSFSLTSQPCRS--KRGNFKVKAGWLFRGGG-QGLGARIERSENANNDILIF
        MVQ  S+ TLT  G  KV  S+L  R      + + L    C   Q +R         +S  +R   +V+A W F+GGG QGL    ERSE+AN DILIF
Subjt:  MVQDLSIHTLTALGDPKVYGSTLSWRKNFKQTRPTQLTSRECFWHQCMRSFSLTSQPCRS--KRGNFKVKAGWLFRGGG-QGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYA+N+EQY+IAQ+LR KLTEVE E I+ QE KRG ++KSE QDKG++IIRLRADLQNAI+SE+Y LAA+LRDEISKLE ESLA SAK L
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFY
        A+E AEY+FRLGQK+RHK FGYR VVCGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYV E+NLL PE+PDKERFDHPY SFL+Y
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRYEVPSDPQDDE
        G DTAGDFIP+KQLREKYNRPR+EVP D QD++
Subjt:  GVDTAGDFIPIKQLREKYNRPRYEVPSDPQDDE

AT2G03390.2 uvrB/uvrC motif-containing protein7.3e-9678.18Show/hide
Query:  LNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQ
        +N+EQY+IAQ+LR KLTEVE E I+ QE KRG ++KSE QDKG++IIRLRADLQNAI+SE+Y LAA+LRDEISKLE ESLA SAK LA+E AEY+FRLGQ
Subjt:  LNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQ

Query:  KVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFYGVDTAGDFIPIKQ
        K+RHK FGYR VVCGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYV E+NLL PE+PDKERFDHPY SFL+YG DTAGDFIP+KQ
Subjt:  KVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFYGVDTAGDFIPIKQ

Query:  LREKYNRPRYEVPSDPQDDE
        LREKYNRPR+EVP D QD++
Subjt:  LREKYNRPRYEVPSDPQDDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCAGGATCTGTCAATACACACTCTGACGGCCTTGGGAGATCCCAAGGTTTATGGATCAACTCTTTCATGGAGGAAGAATTTCAAGCAGACAAGGCCAACCCAATT
AACTTCCAGAGAATGCTTTTGGCATCAATGTATGCGAAGCTTTTCCTTGACTAGCCAACCCTGTAGATCAAAACGAGGAAATTTTAAGGTTAAAGCTGGATGGTTGTTTC
GAGGGGGTGGACAAGGGCTGGGTGCTCGTATAGAGCGCAGTGAGAATGCTAACAATGATATTTTAATCTTCTTTTTCCAGCTGGACCTGGCAACACGAGTACAGTATGCA
TTGAACATTGAGCAGTATGAAATTGCTCAAGAATTGAGAACGAAGCTAACCGAGGTTGAAGCAGAAATCATCAAGCAGCAAGAATCAAAAAGGGGGTTAACTTCAAAAAG
CGAAGTTCAAGACAAAGGATTAAATATCATTCGTCTACGCGCAGATTTGCAGAATGCCATTGAAAGTGAAAATTATGCTTTGGCTGCACAACTGCGGGATGAAATTTCCA
AACTGGAAACTGAATCCCTAGCTGCATCTGCGAAAGTTCTGGCTTATGAAAGTGCTGAATATAGTTTTAGATTGGGACAGAAAGTGAGGCACAAAATTTTTGGATACAGA
GGTGTGGTTTGTGGAATGGATCCTGTGTGTTGTGAATCAAGTTCCTGGATGGAGATAGCACAAGTTGAAAAATTGTCTCGAGGTTCTAATCAGCCATTTTATCAGGTTTT
AGTAGATGTTCGTACAGACCCTGATTTGCTGGTTGCATACGTTCCCGAGGAAAATCTTCTTGTTCCCGAAGAACCAGATAAGGAGAGGTTTGATCATCCATATAATTCCT
TCTTATTCTATGGAGTGGATACAGCCGGGGATTTCATTCCTATAAAGCAACTACGGGAGAAGTATAATCGGCCTCGATATGAAGTCCCCTCTGATCCTCAAGATGACGAG
CAGCGCAGTGATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCAGGATCTGTCAATACACACTCTGACGGCCTTGGGAGATCCCAAGGTTTATGGATCAACTCTTTCATGGAGGAAGAATTTCAAGCAGACAAGGCCAACCCAATT
AACTTCCAGAGAATGCTTTTGGCATCAATGTATGCGAAGCTTTTCCTTGACTAGCCAACCCTGTAGATCAAAACGAGGAAATTTTAAGGTTAAAGCTGGATGGTTGTTTC
GAGGGGGTGGACAAGGGCTGGGTGCTCGTATAGAGCGCAGTGAGAATGCTAACAATGATATTTTAATCTTCTTTTTCCAGCTGGACCTGGCAACACGAGTACAGTATGCA
TTGAACATTGAGCAGTATGAAATTGCTCAAGAATTGAGAACGAAGCTAACCGAGGTTGAAGCAGAAATCATCAAGCAGCAAGAATCAAAAAGGGGGTTAACTTCAAAAAG
CGAAGTTCAAGACAAAGGATTAAATATCATTCGTCTACGCGCAGATTTGCAGAATGCCATTGAAAGTGAAAATTATGCTTTGGCTGCACAACTGCGGGATGAAATTTCCA
AACTGGAAACTGAATCCCTAGCTGCATCTGCGAAAGTTCTGGCTTATGAAAGTGCTGAATATAGTTTTAGATTGGGACAGAAAGTGAGGCACAAAATTTTTGGATACAGA
GGTGTGGTTTGTGGAATGGATCCTGTGTGTTGTGAATCAAGTTCCTGGATGGAGATAGCACAAGTTGAAAAATTGTCTCGAGGTTCTAATCAGCCATTTTATCAGGTTTT
AGTAGATGTTCGTACAGACCCTGATTTGCTGGTTGCATACGTTCCCGAGGAAAATCTTCTTGTTCCCGAAGAACCAGATAAGGAGAGGTTTGATCATCCATATAATTCCT
TCTTATTCTATGGAGTGGATACAGCCGGGGATTTCATTCCTATAAAGCAACTACGGGAGAAGTATAATCGGCCTCGATATGAAGTCCCCTCTGATCCTCAAGATGACGAG
CAGCGCAGTGATGATTGA
Protein sequenceShow/hide protein sequence
MVQDLSIHTLTALGDPKVYGSTLSWRKNFKQTRPTQLTSRECFWHQCMRSFSLTSQPCRSKRGNFKVKAGWLFRGGGQGLGARIERSENANNDILIFFFQLDLATRVQYA
LNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYR
GVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEEPDKERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRYEVPSDPQDDE
QRSDD