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Tan0016042 (gene) of Snake gourd v1 genome

Gene IDTan0016042
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAtp-dependent rna helicase dbp7
Genome locationLG06:11524680..11526920
RNA-Seq ExpressionTan0016042
SyntenyTan0016042
Gene Ontology termsGO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150335.2 uncharacterized protein LOC101219200 [Cucumis sativus]1.2e-5481.02Show/hide
Query:  MEDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRAGKQGKKENWMMNVNETESPPPVLKPMPK
        MEDYYYRRNYIP+FGNWEWNDHLPF+ CFESSRIAG+    DLYVAGDLY+NDVVTPAMIVVPRPRRKRDR GKQ KKE W    N   S     KPMPK
Subjt:  MEDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRAGKQGKKENWMMNVNETESPPPVLKPMPK

Query:  PVDEDLYKISPDLL-AKPKKKRGLSYITNCFVPTCLI
        PVDEDLYKISPDLL AK KKKRGLSYITNCFVPTCLI
Subjt:  PVDEDLYKISPDLL-AKPKKKRGLSYITNCFVPTCLI

XP_022960043.1 uncharacterized protein LOC111460910 [Cucurbita moschata]8.8e-5881.43Show/hide
Query:  MEDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRAGKQGKKENWMMNVNETESPPPVL----K
        MEDY Y+RN+IPTFGNWEWNDHLPFTQCFE+SRIAGY DVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDR GKQ K++ W      TESPP V     K
Subjt:  MEDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRAGKQGKKENWMMNVNETESPPPVL----K

Query:  PMPKPVDEDLYKISPDLLAKPKKKRGLSYITNCFVPTCLI
        PMPKPVDEDLYKISP+  AKPKKKRGLSYIT+CFVPTCLI
Subjt:  PMPKPVDEDLYKISPDLLAKPKKKRGLSYITNCFVPTCLI

XP_023548222.1 uncharacterized protein LOC111806925 [Cucurbita pepo subsp. pepo]1.0e-5375Show/hide
Query:  MEDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRAGKQGKKENWMMNVNETESPPPVL----K
        MEDYY RRNYIP+FGNWEWNDHL F+ CFESSRIAGY    DLYV GDLY+NDVVTPAMIVVPR RRKR++ GKQGKK NWMMN+ ETESPP  L    +
Subjt:  MEDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRAGKQGKKENWMMNVNETESPPPVL----K

Query:  PMPKPVDEDLYKISPDLLAKPKKKRGLSYITNCFVPTCLI
        P PKPVDEDLYKI P+LLAK +KKRGLS+  N FVP CLI
Subjt:  PMPKPVDEDLYKISPDLLAKPKKKRGLSYITNCFVPTCLI

XP_023550147.1 uncharacterized protein LOC111808425 [Cucurbita pepo subsp. pepo]6.7e-5881.43Show/hide
Query:  MEDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRAGKQGKKENWMMNVNETESPPPVL----K
        MEDY Y+RN+IPTFGNWEWNDHLPFTQCFE+SRIAGY DVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDR GKQ  ++ W      TESPP V     K
Subjt:  MEDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRAGKQGKKENWMMNVNETESPPPVL----K

Query:  PMPKPVDEDLYKISPDLLAKPKKKRGLSYITNCFVPTCLI
        PMPKPVDEDLYKISP+L AKPKKKRGLSYIT+CFVPTCLI
Subjt:  PMPKPVDEDLYKISPDLLAKPKKKRGLSYITNCFVPTCLI

XP_038899118.1 uncharacterized protein LOC120086508 [Benincasa hispida]3.6e-5982.52Show/hide
Query:  MEDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRAGKQGKKENWMMNVNETESPPPVL-----
        MEDYYYRRNYIP+FGNWEWNDHLPF+ CF+SSRIAGY    DLYVAGDLYQNDVVTPAMIVVPRPRRKRDR GKQG+KENWM    ETESPP  +     
Subjt:  MEDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRAGKQGKKENWMMNVNETESPPPVL-----

Query:  -KPMPKPVDEDLYKISPDLL-AKPKKKRGLSYITNCFVPTCLI
         KPMPKPVDEDLYKISPDLL AK KKKRGLSYITNCFVPTCLI
Subjt:  -KPMPKPVDEDLYKISPDLL-AKPKKKRGLSYITNCFVPTCLI

TrEMBL top hitse value%identityAlignment
A0A0A0KA54 Uncharacterized protein5.7e-5581.02Show/hide
Query:  MEDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRAGKQGKKENWMMNVNETESPPPVLKPMPK
        MEDYYYRRNYIP+FGNWEWNDHLPF+ CFESSRIAG+    DLYVAGDLY+NDVVTPAMIVVPRPRRKRDR GKQ KKE W    N   S     KPMPK
Subjt:  MEDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRAGKQGKKENWMMNVNETESPPPVLKPMPK

Query:  PVDEDLYKISPDLL-AKPKKKRGLSYITNCFVPTCLI
        PVDEDLYKISPDLL AK KKKRGLSYITNCFVPTCLI
Subjt:  PVDEDLYKISPDLL-AKPKKKRGLSYITNCFVPTCLI

A0A6J1GPL2 uncharacterized protein LOC1114559795.0e-5173.57Show/hide
Query:  MEDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRAGKQGKKENWMMNVNETESPPPVL----K
        MEDYY RRNYIP+FGNWEWNDHL F+ CFESSRIAGY    DLYV GDLY+NDVVTPAMIVVPR RRKR++ GKQGKK N+ MN+ ETESPP  L    +
Subjt:  MEDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRAGKQGKKENWMMNVNETESPPPVL----K

Query:  PMPKPVDEDLYKISPDLLAKPKKKRGLSYITNCFVPTCLI
        P PKPVDEDLYKI P+LLAK +KKRGLS+  N FVP CLI
Subjt:  PMPKPVDEDLYKISPDLLAKPKKKRGLSYITNCFVPTCLI

A0A6J1H7P4 uncharacterized protein LOC1114609104.3e-5881.43Show/hide
Query:  MEDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRAGKQGKKENWMMNVNETESPPPVL----K
        MEDY Y+RN+IPTFGNWEWNDHLPFTQCFE+SRIAGY DVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDR GKQ K++ W      TESPP V     K
Subjt:  MEDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRAGKQGKKENWMMNVNETESPPPVL----K

Query:  PMPKPVDEDLYKISPDLLAKPKKKRGLSYITNCFVPTCLI
        PMPKPVDEDLYKISP+  AKPKKKRGLSYIT+CFVPTCLI
Subjt:  PMPKPVDEDLYKISPDLLAKPKKKRGLSYITNCFVPTCLI

A0A6J1JQ37 uncharacterized protein LOC1114879312.4e-5372.86Show/hide
Query:  MEDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRAGKQGKKENWMMNVNETESPPPVL----K
        MEDYY RRNYIP+FGNWEWNDHL F+ CFESSRIAGY    DLYV GDLY+ND++TPAMIVVPR RRKR++ GK+GKK NWMMN+ ETESPP  L    +
Subjt:  MEDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRAGKQGKKENWMMNVNETESPPPVL----K

Query:  PMPKPVDEDLYKISPDLLAKPKKKRGLSYITNCFVPTCLI
        P PKPVDEDLYKI P+LLAK +KKRGLS+  N FVP CLI
Subjt:  PMPKPVDEDLYKISPDLLAKPKKKRGLSYITNCFVPTCLI

A0A6J1KPV8 uncharacterized protein LOC1114976314.3e-5881.43Show/hide
Query:  MEDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRAGKQGKKENWMMNVNETESPPPVL----K
        MEDY Y+RN+IPTFGNWEWNDHLPFTQCFE+SRIAGY DVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDR GKQ K++ W      TESPP V     K
Subjt:  MEDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRAGKQGKKENWMMNVNETESPPPVL----K

Query:  PMPKPVDEDLYKISPDLLAKPKKKRGLSYITNCFVPTCLI
        PMPKPVDEDLYKISP+  AKPKKKRGLSYIT+CFVPTCLI
Subjt:  PMPKPVDEDLYKISPDLLAKPKKKRGLSYITNCFVPTCLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18310.1 unknown protein3.4e-0730.3Show/hide
Query:  EDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRP-RRKRDRAGKQGKKENWMMNVNETESPPPVLKPMPK
        + Y  +   IP FG WE  + +P TQ FE+ R A    +   +           T        P RR RD + +  K    +  V + ++   +    PK
Subjt:  EDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRP-RRKRDRAGKQGKKENWMMNVNETESPPPVLKPMPK

Query:  PVDEDLYKISPDLLAKPKKKRGLSYITNCFVP
        PVDEDLYKI P+ +    +KR  S++  C VP
Subjt:  PVDEDLYKISPDLLAKPKKKRGLSYITNCFVP

AT5G18310.2 unknown protein2.6e-0727.78Show/hide
Query:  EDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVV------------PRPRR---KRDRAGKQGKK--------
        + Y  +   IP FG WE  + +P TQ FE+ R AG   +R  Y       +   + +                PRPR    +R  AG + K+        
Subjt:  EDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVV------------PRPRR---KRDRAGKQGKK--------

Query:  -----ENWMMNVN---ETESPPPVLKPMPKPVDEDLYKISPDLLAKPKKKRGLSYITNCFVP
             + + ++VN   + ++   +    PKPVDEDLYKI P+ +    +KR  S++  C VP
Subjt:  -----ENWMMNVN---ETESPPPVLKPMPKPVDEDLYKISPDLLAKPKKKRGLSYITNCFVP

AT5G48500.1 unknown protein1.9e-2644.59Show/hide
Query:  YYRRNYIPTFGNWEWNDHLPFTQCFESS--------RIAGYSDVRDLYVAGDLYQN-DVVTPAMIVVPR--------PRRKRDRAGKQGKKENWMMNVNE
        Y RR ++P FG+W+WND +PFTQCFE++          A Y   RDLY+AGDLY N  +V PA+I+VPR        P  K+    KQ  + N+     E
Subjt:  YYRRNYIPTFGNWEWNDHLPFTQCFESS--------RIAGYSDVRDLYVAGDLYQN-DVVTPAMIVVPR--------PRRKRDRAGKQGKKENWMMNVNE

Query:  ----TESPPPVLK---PMPKPVDEDLYKISPDLLA-KPKKKR---GLSYITNCFVPT
               P PV+K     PKPVDEDLYK+SP LL+ K K+KR   G   I+ CF+PT
Subjt:  ----TESPPPVLK---PMPKPVDEDLYKISPDLLA-KPKKKR---GLSYITNCFVPT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATTACTACTACCGTAGAAACTACATTCCGACGTTCGGAAACTGGGAATGGAACGACCATCTCCCCTTCACACAGTGCTTCGAATCTTCCAGAATCGCCGGATA
TTCCGACGTCCGCGATTTGTACGTCGCCGGCGATTTGTACCAAAACGATGTCGTTACACCTGCTATGATCGTCGTCCCTCGCCCCAGGAGGAAGCGTGACAGAGCTGGGA
AGCAAGGAAAAAAGGAAAATTGGATGATGAATGTGAATGAAACTGAAAGCCCTCCTCCAGTATTAAAGCCAATGCCCAAGCCTGTTGACGAAGACTTGTACAAAATTTCT
CCTGACCTCCTCGCCAAGCCCAAAAAGAAGAGAGGGTTGAGTTACATAACAAACTGCTTTGTGCCAACTTGTTTGATTTGA
mRNA sequenceShow/hide mRNA sequence
ACTAAACCCCCTTTTTATAAATGCCCCCTCCTTAAACTTCCACTGGAATTCAATTCAACCACTGAACTCCCCCCATTCCCTTTCTCTCTCATCTCTCTCTGCAAACAACA
AAGCTTCTTCAATGGAGGATTACTACTACCGTAGAAACTACATTCCGACGTTCGGAAACTGGGAATGGAACGACCATCTCCCCTTCACACAGTGCTTCGAATCTTCCAGA
ATCGCCGGATATTCCGACGTCCGCGATTTGTACGTCGCCGGCGATTTGTACCAAAACGATGTCGTTACACCTGCTATGATCGTCGTCCCTCGCCCCAGGAGGAAGCGTGA
CAGAGCTGGGAAGCAAGGAAAAAAGGAAAATTGGATGATGAATGTGAATGAAACTGAAAGCCCTCCTCCAGTATTAAAGCCAATGCCCAAGCCTGTTGACGAAGACTTGT
ACAAAATTTCTCCTGACCTCCTCGCCAAGCCCAAAAAGAAGAGAGGGTTGAGTTACATAACAAACTGCTTTGTGCCAACTTGTTTGATTTGAAGAAGAGAGAGATCCAAA
TCCATCATCAGCTGAAGGGGGCAATCAATGTATATTTATCTCATCAAAAACAGACACAGGCCAAACAGTATATAAATCTTTTGGGATATCATATTTATATATATATATAT
ATATATTTTGAAGGCCAAAAAACAAAAAAAACAAAAAAAAAAATAGAATATCAATGTTTCTTTTATCCACCATAGATTCTAATTTTGGGAGTGTGTTTTAATTAGAGGGG
AGAACTATTTGTACAAGGTTTTCCCATTGGTTACTATGTTGAGTGGTTTTTTTTTTTTTTTTTTTAAATTTGGTGT
Protein sequenceShow/hide protein sequence
MEDYYYRRNYIPTFGNWEWNDHLPFTQCFESSRIAGYSDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRAGKQGKKENWMMNVNETESPPPVLKPMPKPVDEDLYKIS
PDLLAKPKKKRGLSYITNCFVPTCLI