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Tan0016077 (gene) of Snake gourd v1 genome

Gene IDTan0016077
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG06:79440595..79441244
RNA-Seq ExpressionTan0016077
SyntenyTan0016077
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575081.1 hypothetical protein SDJN03_25720, partial [Cucurbita argyrosperma subsp. sororia]2.1e-1870.89Show/hide
Query:  DLVKIGREGFELIDKFFGRTSAARRAAAPSRLARPALPQPPRKAEQPPSRKKNEKPVADENCDQVARARGGIVITTWRA
        DL KIGREGF+LID++FGR  A RRAAA +  ARPALPQ P KAEQPP +K+ + PVA  NC+QVA+ARGGIVITTWRA
Subjt:  DLVKIGREGFELIDKFFGRTSAARRAAAPSRLARPALPQPPRKAEQPPSRKKNEKPVADENCDQVARARGGIVITTWRA

KAG6575082.1 hypothetical protein SDJN03_25721, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1869.88Show/hide
Query:  APPADLVKIGREGFELIDKFFGRTSAARRAAAPSRLARPALPQPPRKAEQPPSRKKNEKPVADENCDQVARARGGIVITTWRA
        AP ADL KIGREGFELID++FGR  A RR A    +ARPALPQ P KAEQPP RK  EK     NC+QVARARGG+VITTWRA
Subjt:  APPADLVKIGREGFELIDKFFGRTSAARRAAAPSRLARPALPQPPRKAEQPPSRKKNEKPVADENCDQVARARGGIVITTWRA

KGN47421.1 hypothetical protein Csa_021737 [Cucumis sativus]9.9e-1660.2Show/hide
Query:  MGMREREIRAPPADLVKIGREGFELIDKFFGR--TSAARRAAAPSRLARPALPQPPRK-AEQPPSRKKNEKPVADENCDQVARARGGIVITTWRAYAK
        MG REREI    A+L +IG EGF+LIDKFFGR  T+  RR  A + + RPA  QPPRK AEQPPS+ K EK  A    D +A+ RGGIVITTWR+YAK
Subjt:  MGMREREIRAPPADLVKIGREGFELIDKFFGR--TSAARRAAAPSRLARPALPQPPRK-AEQPPSRKKNEKPVADENCDQVARARGGIVITTWRAYAK

KGN47422.1 hypothetical protein Csa_021740 [Cucumis sativus]1.0e-2066.32Show/hide
Query:  MREREIRAPPADLVKIGREGFELIDKFFGRTSA--ARRAAAPSRLARPALPQPPRKAEQPPSRKKNEKPVADENCDQVARARGGIVITTWRAYAK
        +REREIR    DL KIGREGF++ID++FGR S+  ARR AA  + ARPALPQPPRKAEQPP R + EKPVA    DQVA+  GG VITTWR YAK
Subjt:  MREREIRAPPADLVKIGREGFELIDKFFGRTSA--ARRAAAPSRLARPALPQPPRKAEQPPSRKKNEKPVADENCDQVARARGGIVITTWRAYAK

XP_023548315.1 multiple organellar RNA editing factor 3, mitochondrial [Cucurbita pepo subsp. pepo]2.8e-1066.18Show/hide
Query:  APPADLVKIGREGFELIDKFFGRTSAARRAAAPSRLARPALPQPPRKAEQPPSRKKNEKPVADENCDQ
        AP ADL KIGREGFELID++FGR  A RRAAA +   RPALPQ P KAEQPP RK  EK     NC+Q
Subjt:  APPADLVKIGREGFELIDKFFGRTSAARRAAAPSRLARPALPQPPRKAEQPPSRKKNEKPVADENCDQ

TrEMBL top hitse value%identityAlignment
A0A0A0KG95 Uncharacterized protein5.0e-2166.32Show/hide
Query:  MREREIRAPPADLVKIGREGFELIDKFFGRTSA--ARRAAAPSRLARPALPQPPRKAEQPPSRKKNEKPVADENCDQVARARGGIVITTWRAYAK
        +REREIR    DL KIGREGF++ID++FGR S+  ARR AA  + ARPALPQPPRKAEQPP R + EKPVA    DQVA+  GG VITTWR YAK
Subjt:  MREREIRAPPADLVKIGREGFELIDKFFGRTSA--ARRAAAPSRLARPALPQPPRKAEQPPSRKKNEKPVADENCDQVARARGGIVITTWRAYAK

A0A0A0KI19 Uncharacterized protein4.8e-1660.2Show/hide
Query:  MGMREREIRAPPADLVKIGREGFELIDKFFGR--TSAARRAAAPSRLARPALPQPPRK-AEQPPSRKKNEKPVADENCDQVARARGGIVITTWRAYAK
        MG REREI    A+L +IG EGF+LIDKFFGR  T+  RR  A + + RPA  QPPRK AEQPPS+ K EK  A    D +A+ RGGIVITTWR+YAK
Subjt:  MGMREREIRAPPADLVKIGREGFELIDKFFGR--TSAARRAAAPSRLARPALPQPPRK-AEQPPSRKKNEKPVADENCDQVARARGGIVITTWRAYAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATGAGAGAGAGAGAAATTAGGGCTCCTCCAGCTGACTTGGTGAAGATTGGGAGAGAAGGATTTGAACTAATTGACAAATTCTTCGGTCGAACGTCGGCGGCGAG
ACGGGCAGCGGCGCCGTCGAGGCTGGCCAGGCCGGCTCTGCCGCAGCCGCCGCGTAAGGCGGAGCAACCTCCTTCGAGGAAGAAGAACGAAAAGCCAGTGGCGGACGAGA
ACTGCGATCAGGTGGCCAGAGCACGTGGCGGAATCGTGATAACAACTTGGCGTGCGTATGCAAAATAA
mRNA sequenceShow/hide mRNA sequence
TTGGAACTTCCCCCAAGCTCTCTATAAATGGGCCAACTCAAATGAAAGCTTCAACAAACCAACAAGCATTCCAAAAACAAAATTCAGAAATAAAAACGAACTTTTTTTTT
GGGAAATTATGGGTATGAGAGAGAGAGAAATTAGGGCTCCTCCAGCTGACTTGGTGAAGATTGGGAGAGAAGGATTTGAACTAATTGACAAATTCTTCGGTCGAACGTCG
GCGGCGAGACGGGCAGCGGCGCCGTCGAGGCTGGCCAGGCCGGCTCTGCCGCAGCCGCCGCGTAAGGCGGAGCAACCTCCTTCGAGGAAGAAGAACGAAAAGCCAGTGGC
GGACGAGAACTGCGATCAGGTGGCCAGAGCACGTGGCGGAATCGTGATAACAACTTGGCGTGCGTATGCAAAATAAATATAATATAGGTTATCTCTAGAACTGGTGCTCA
TAATATAAATATATACAAATATGAGTACTTAACTGCAATATATATATATAAGAAGCTGTAGCTCTAGCTTGCTTGTTGTTGGGGCCCTAGTATCAAAGTATGTATTTGAA
AGACTGCTTATGAAACCTCTCCCTTATGAGAGTTTCAACTTTTAAGTTTGTTTGTGTTTATTTCATTATCAAAATTTTAAAAATATGTTCTATAGATTTT
Protein sequenceShow/hide protein sequence
MGMREREIRAPPADLVKIGREGFELIDKFFGRTSAARRAAAPSRLARPALPQPPRKAEQPPSRKKNEKPVADENCDQVARARGGIVITTWRAYAK