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Tan0016078 (gene) of Snake gourd v1 genome

Gene IDTan0016078
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCalcium-binding EF-hand family protein, putative
Genome locationLG02:85487048..85487660
RNA-Seq ExpressionTan0016078
SyntenyTan0016078
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060893.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]2.0e-2670.59Show/hide
Query:  DKKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVVDYAIKCNYNIL
        DKK    +LQ+EEMK IFREHD NGDGRLSI+E+SRAFG  GA  P+YRAA G  +AD DGDG+ISE+EL+KVVDYAIKC YN+L
Subjt:  DKKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVVDYAIKCNYNIL

KAG6585659.1 hypothetical protein SDJN03_18392, partial [Cucurbita argyrosperma subsp. sororia]4.4e-2975.56Show/hide
Query:  MARKCDKKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVVDYAIKCNYNIL
        MA K  KKN S  L REE+KAIF+EHD NGDGRLSIQE+SRAFGMLGA LP+YRA  G LIAD +GDGYI+E ELDKVVDYAIKC YNI+
Subjt:  MARKCDKKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVVDYAIKCNYNIL

KAG6585660.1 Calmodulin-like protein 5, partial [Cucurbita argyrosperma subsp. sororia]2.7e-2673.81Show/hide
Query:  KKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVVDYAIKCNYNIL
        KK  + RL+REE+KAIFREHD+NGDGRLSIQE+SRAFGM GA LP+YRAA     ADA+GDG+I+E+ELDKVVDYAIKC YNI+
Subjt:  KKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVVDYAIKCNYNIL

KGN62515.1 hypothetical protein Csa_022644 [Cucumis sativus]1.6e-2670.59Show/hide
Query:  DKKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVVDYAIKCNYNIL
        DKK    +LQ+EEMK +FREHD NGDGRLSI+E+SRAFG  GA  P+YRAA G  +AD DGDG+ISE+ELDKVVDYAIKC YN+L
Subjt:  DKKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVVDYAIKCNYNIL

XP_022144349.1 calmodulin-like protein 5 [Momordica charantia]4.5e-2667.78Show/hide
Query:  MARKCDKKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVVDYAIKCNYNIL
        M  KC KK  S +L REE+KAIFR HD+NGDG LSI+E+SRAFG LGA LP+YRA  G L ADADGDG I++EEL+KVVDYA+KC Y+I+
Subjt:  MARKCDKKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVVDYAIKCNYNIL

TrEMBL top hitse value%identityAlignment
A0A0A0LKW4 Uncharacterized protein7.6e-2770.59Show/hide
Query:  DKKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVVDYAIKCNYNIL
        DKK    +LQ+EEMK +FREHD NGDGRLSI+E+SRAFG  GA  P+YRAA G  +AD DGDG+ISE+ELDKVVDYAIKC YN+L
Subjt:  DKKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVVDYAIKCNYNIL

A0A5A7UY46 Putative calcium-binding protein CML109.9e-2770.59Show/hide
Query:  DKKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVVDYAIKCNYNIL
        DKK    +LQ+EEMK IFREHD NGDGRLSI+E+SRAFG  GA  P+YRAA G  +AD DGDG+ISE+EL+KVVDYAIKC YN+L
Subjt:  DKKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVVDYAIKCNYNIL

A0A6J1CS20 calmodulin-like protein 52.2e-2667.78Show/hide
Query:  MARKCDKKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVVDYAIKCNYNIL
        M  KC KK  S +L REE+KAIFR HD+NGDG LSI+E+SRAFG LGA LP+YRA  G L ADADGDG I++EEL+KVVDYA+KC Y+I+
Subjt:  MARKCDKKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVVDYAIKCNYNIL

A0A6J1GK16 calmodulin-like1.2e-1650.59Show/hide
Query:  ARKCDKKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVVDYAIKCN
        A+  ++K  S +L R ++K IF EHD++GDG LS+ E+++AF   G+ +P+Y+A  G   ADADGDG ISEEEL+K+VDYA + N
Subjt:  ARKCDKKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVVDYAIKCN

A0A6J1KUW2 calmodulin-like1.2e-1650.59Show/hide
Query:  ARKCDKKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVVDYAIKCN
        A+  ++K  S +L R ++K IF EHD++GDG LS+ E+++AF   G+ +P+Y+A  G   ADADGDG ISEEEL+K+VDYA + N
Subjt:  ARKCDKKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVVDYAIKCN

SwissProt top hitse value%identityAlignment
O64943 Polcalcin Jun o 26.6e-0436.84Show/hide
Query:  EMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEE
        E++ +F++ D NGDG++S  E++     LG+ +           ADADGDGY+S +E
Subjt:  EMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEE

Q6L4D4 Probable calcium-binding protein CML152.3e-0441.82Show/hide
Query:  EEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYIS
        +E + +FR+ D NGDGR+S  E++  F  +G ++     A     AD+DGDGYIS
Subjt:  EEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYIS

Q8RZB5 Probable calcium-binding protein CML105.4e-0646.55Show/hide
Query:  EEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEE
        EEM+ +FR+ D NGDGR+S  E+   F  LG +      A     ADADGDG+IS +E
Subjt:  EEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEE

Q9FYK2 Probable calcium-binding protein CML252.3e-0433.82Show/hide
Query:  KKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEE
        +K  S + +  E++A+F++ D+NGDG++S +E+      LG  +P           D  GDGYI+ EE
Subjt:  KKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEE

Q9SRE6 Calcium-binding protein CML387.8e-0533.85Show/hide
Query:  QREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVV
        +  E++A+F   D N DGR+S +E+ ++F  LG  L    A     ++D DGDG +  EE  +++
Subjt:  QREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVV

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein1.8e-0436.21Show/hide
Query:  EEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEE
        EE+K +F + D NGDG++S+ E+   F  +G S             D D DGYI+ +E
Subjt:  EEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEE

AT1G18210.2 Calcium-binding EF-hand family protein1.8e-0436.21Show/hide
Query:  EEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEE
        EE+K +F + D NGDG++S+ E+   F  +G S             D D DGYI+ +E
Subjt:  EEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEE

AT1G24620.1 EF hand calcium-binding protein family1.6e-0533.82Show/hide
Query:  KKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEE
        +K  S + +  E++A+F++ D+NGDG++S +E+      LG  +P           D  GDGYI+ EE
Subjt:  KKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEE

AT1G76650.1 calmodulin-like 385.6e-0633.85Show/hide
Query:  QREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVV
        +  E++A+F   D N DGR+S +E+ ++F  LG  L    A     ++D DGDG +  EE  +++
Subjt:  QREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVV

AT1G76650.3 calmodulin-like 385.6e-0633.85Show/hide
Query:  QREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVV
        +  E++A+F   D N DGR+S +E+ ++F  LG  L    A     ++D DGDG +  EE  +++
Subjt:  QREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGTAAATGTGACAAGAAGAACATCAGCTGCAGATTGCAAAGAGAGGAGATGAAAGCAATCTTTAGGGAGCATGATTTGAACGGCGATGGCCGATTGAGCATCCA
AGAAGTGTCGAGAGCGTTCGGAATGCTCGGAGCATCTCTACCGGTCTACCGTGCAGCCCTTGGCTTCCTCATTGCCGACGCCGATGGAGATGGATATATCAGTGAGGAAG
AACTGGATAAGGTGGTGGATTATGCTATAAAGTGTAACTATAACATATTAATCTAG
mRNA sequenceShow/hide mRNA sequence
CTCAATATCAACACAACCGCAACACAAAGGCTGCGAAATCGTGTCGGTTTCGTGTATTCGGGGGATCAAATGGCTCGTAAATGTGACAAGAAGAACATCAGCTGCAGATT
GCAAAGAGAGGAGATGAAAGCAATCTTTAGGGAGCATGATTTGAACGGCGATGGCCGATTGAGCATCCAAGAAGTGTCGAGAGCGTTCGGAATGCTCGGAGCATCTCTAC
CGGTCTACCGTGCAGCCCTTGGCTTCCTCATTGCCGACGCCGATGGAGATGGATATATCAGTGAGGAAGAACTGGATAAGGTGGTGGATTATGCTATAAAGTGTAACTAT
AACATATTAATCTAGTTAGTTGTCTTTTCCATCCTTGAGGCAGGAGGTTTTCTTGTGAGATGCATGTGAATAACAAATAATGTATAAGGTAATGTGTTCAAGAAACCTTC
CTTATATTGTAATTTGTAAATGCCCTTGCTGATGCAAAGATGATAGGATTTCCAATGAATATATATTATATGGTGCGTGTATGCACATGATAGTAATTTTCTAAATATAT
GTATAGTTACCGAGTAAAATTTAGGAATGGTTGGATAACATTCTTGTTTTTTATTTATTATTA
Protein sequenceShow/hide protein sequence
MARKCDKKNISCRLQREEMKAIFREHDLNGDGRLSIQEVSRAFGMLGASLPVYRAALGFLIADADGDGYISEEELDKVVDYAIKCNYNILI