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Tan0016095 (gene) of Snake gourd v1 genome

Gene IDTan0016095
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionmyb family transcription factor PHL6-like
Genome locationLG04:51404963..51411437
RNA-Seq ExpressionTan0016095
SyntenyTan0016095
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032464.1 putative Myb family transcription factor [Cucurbita argyrosperma subsp. argyrosperma]1.6e-0742.67Show/hide
Query:  TQSNSYAAYYDYDMHFH-----TMPNHIHTANM-DPPSPFSLSLLQ----------PMRRRKDNRDEERVIEEHNKQYQESQTKDFELSLSLSLHHPSIQ
        T +  Y   Y     +H      MPNHI T NM    SPFSL L Q          PM R K NRD  RV+++ ++  +E Q KDF+  LSLSL   S+Q
Subjt:  TQSNSYAAYYDYDMHFH-----TMPNHIHTANM-DPPSPFSLSLLQ----------PMRRRKDNRDEERVIEEHNKQYQESQTKDFELSLSLSLHHPSIQ

Query:  MTNPVATPVPDIDDVYSSSYSSSRNKNSPLQK-HEIDLELSISLYQNLEG
         TNP   P+P +    SSS S+S +K+  +QK  EIDL+LSISL  N  G
Subjt:  MTNPVATPVPDIDDVYSSSYSSSRNKNSPLQK-HEIDLELSISLYQNLEG

XP_022929947.1 myb family transcription factor PHL6-like [Cucurbita moschata]3.2e-0843.33Show/hide
Query:  TQSNSYAAYYDYDMHFH-----TMPNHIHTANM-DPPSPFSLSLLQ----------PMRRRKDNRDEERVIEEHNKQYQESQTKDFELSLSLSLHHPSIQ
        T +  Y   Y     +H      MPNHI T NM    SPFSL L Q          PM R K NRD  RV+++ ++  +E Q KDF+  LSLSL   S+Q
Subjt:  TQSNSYAAYYDYDMHFH-----TMPNHIHTANM-DPPSPFSLSLLQ----------PMRRRKDNRDEERVIEEHNKQYQESQTKDFELSLSLSLHHPSIQ

Query:  MTNPVATPVPDIDDVYSSSYSSSRNKNSPLQK-HEIDLELSISLYQNLEG
         TNP   P+P +    SSS SSS +K+  +QK  EIDL+LSISL  N  G
Subjt:  MTNPVATPVPDIDDVYSSSYSSSRNKNSPLQK-HEIDLELSISLYQNLEG

XP_022991492.1 putative Myb family transcription factor At1g14600 [Cucurbita maxima]3.4e-1047.06Show/hide
Query:  YDYDMHFHTMPNHIHTANM-DPPSPFSLSLLQ----------PMRRRKDNRDEERVIEEHNKQYQESQTKDFELSLSLSLHHPSIQMTNPVATPVPDIDD
        Y Y++H H MPNHI T NM    SPFSL L Q          PM R K  RD  RV+++ ++  +E Q KDF+  LSLSL   S+Q TNP   P+P +  
Subjt:  YDYDMHFHTMPNHIHTANM-DPPSPFSLSLLQ----------PMRRRKDNRDEERVIEEHNKQYQESQTKDFELSLSLSLHHPSIQMTNPVATPVPDIDD

Query:  VYSSSYSSSRNKNSPLQKH-EIDLELSISLYQNLEG
          SSS  +S +K+ P+QKH EIDL+LSISL  N +G
Subjt:  VYSSSYSSSRNKNSPLQKH-EIDLELSISLYQNLEG

XP_023516803.1 putative Myb family transcription factor At1g14600 [Cucurbita pepo subsp. pepo]1.6e-0744.53Show/hide
Query:  YDYDMHFHTMPNHIHTANMD--PPSPFSLSLLQ----------PMRRRKDNRDEERVIEEHNKQYQESQTKDFELSLSLSLHHPSIQMTNPVATPVPDID
        Y Y++H H MPNHI T NM     SPFSL L Q          PM R K  RD  RV+++ ++  +E Q +D++  LSLSL   S+Q TNP   P+P + 
Subjt:  YDYDMHFHTMPNHIHTANMD--PPSPFSLSLLQ----------PMRRRKDNRDEERVIEEHNKQYQESQTKDFELSLSLSLHHPSIQMTNPVATPVPDID

Query:  DVYSSSYSSSRNKNSPLQK-HEIDLELSISLYQNLEG
           SSS SSS +K+  +QK  EI+L+LSISL  N  G
Subjt:  DVYSSSYSSSRNKNSPLQK-HEIDLELSISLYQNLEG

TrEMBL top hitse value%identityAlignment
A0A6J1EP17 myb family transcription factor PHL6-like1.6e-0843.33Show/hide
Query:  TQSNSYAAYYDYDMHFH-----TMPNHIHTANM-DPPSPFSLSLLQ----------PMRRRKDNRDEERVIEEHNKQYQESQTKDFELSLSLSLHHPSIQ
        T +  Y   Y     +H      MPNHI T NM    SPFSL L Q          PM R K NRD  RV+++ ++  +E Q KDF+  LSLSL   S+Q
Subjt:  TQSNSYAAYYDYDMHFH-----TMPNHIHTANM-DPPSPFSLSLLQ----------PMRRRKDNRDEERVIEEHNKQYQESQTKDFELSLSLSLHHPSIQ

Query:  MTNPVATPVPDIDDVYSSSYSSSRNKNSPLQK-HEIDLELSISLYQNLEG
         TNP   P+P +    SSS SSS +K+  +QK  EIDL+LSISL  N  G
Subjt:  MTNPVATPVPDIDDVYSSSYSSSRNKNSPLQK-HEIDLELSISLYQNLEG

A0A6J1JLZ1 putative Myb family transcription factor At1g146001.7e-1047.06Show/hide
Query:  YDYDMHFHTMPNHIHTANM-DPPSPFSLSLLQ----------PMRRRKDNRDEERVIEEHNKQYQESQTKDFELSLSLSLHHPSIQMTNPVATPVPDIDD
        Y Y++H H MPNHI T NM    SPFSL L Q          PM R K  RD  RV+++ ++  +E Q KDF+  LSLSL   S+Q TNP   P+P +  
Subjt:  YDYDMHFHTMPNHIHTANM-DPPSPFSLSLLQ----------PMRRRKDNRDEERVIEEHNKQYQESQTKDFELSLSLSLHHPSIQMTNPVATPVPDIDD

Query:  VYSSSYSSSRNKNSPLQKH-EIDLELSISLYQNLEG
          SSS  +S +K+ P+QKH EIDL+LSISL  N +G
Subjt:  VYSSSYSSSRNKNSPLQKH-EIDLELSISLYQNLEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGCAGCGCAGCCAAGAAATATCATCAATATTATTATATGAGACAGAGACGCTAACACAATCAAATTCATATGCGGCCTATTATGATTATGATATGCACTTCCA
CACAATGCCCAACCATATTCATACTGCAAACATGGATCCTCCCTCACCTTTCTCTCTCTCGCTTTTACAGCCCATGCGACGTCGTAAAGATAATAGGGATGAAGAAAGAG
TAATTGAAGAACACAACAAACAATACCAAGAAAGCCAAACCAAGGATTTTGAACTTTCATTGTCTCTCTCCCTACACCACCCTTCTATACAAATGACTAACCCCGTCGCC
ACTCCGGTCCCCGACATTGACGACGTATACTCCTCCTCCTATTCAAGCTCTCGCAACAAAAATTCTCCACTTCAAAAACACGAAATCGACTTAGAGTTATCGATATCACT
TTACCAAAACCTCGAAGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGCAGCGCAGCCAAGAAATATCATCAATATTATTATATGAGACAGAGACGCTAACACAATCAAATTCATATGCGGCCTATTATGATTATGATATGCACTTCCA
CACAATGCCCAACCATATTCATACTGCAAACATGGATCCTCCCTCACCTTTCTCTCTCTCGCTTTTACAGCCCATGCGACGTCGTAAAGATAATAGGGATGAAGAAAGAG
TAATTGAAGAACACAACAAACAATACCAAGAAAGCCAAACCAAGGATTTTGAACTTTCATTGTCTCTCTCCCTACACCACCCTTCTATACAAATGACTAACCCCGTCGCC
ACTCCGGTCCCCGACATTGACGACGTATACTCCTCCTCCTATTCAAGCTCTCGCAACAAAAATTCTCCACTTCAAAAACACGAAATCGACTTAGAGTTATCGATATCACT
TTACCAAAACCTCGAAGGATAA
Protein sequenceShow/hide protein sequence
MDEQRSQEISSILLYETETLTQSNSYAAYYDYDMHFHTMPNHIHTANMDPPSPFSLSLLQPMRRRKDNRDEERVIEEHNKQYQESQTKDFELSLSLSLHHPSIQMTNPVA
TPVPDIDDVYSSSYSSSRNKNSPLQKHEIDLELSISLYQNLEG