; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016100 (gene) of Snake gourd v1 genome

Gene IDTan0016100
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionribosomal RNA small subunit methyltransferase NEP1
Genome locationLG03:788737..796670
RNA-Seq ExpressionTan0016100
SyntenyTan0016100
Gene Ontology termsGO:0070475 - rRNA base methylation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0019843 - rRNA binding (molecular function)
GO:0070037 - rRNA (pseudouridine) methyltransferase activity (molecular function)
InterPro domainsIPR005304 - Ribosomal biogenesis, methyltransferase, EMG1/NEP1
IPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017643.1 Ribosomal RNA small subunit methyltransferase NEP1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-13689.36Show/hide
Query:  MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNS
        MVRPFA KGKKRKKTE+YDRD+   EST   KK MVE EP+   E   NEAA+++FHELEGIPI+P+DPKSD+ AGVIFVLERASLEVAKVGKNYQLLNS
Subjt:  MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNS

Query:  DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ
        DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ
Subjt:  DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ

Query:  YLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        YLP+NSRKMGFSHSSDKLVK+R YLDAV+DDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  YLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_004136640.2 ribosomal RNA small subunit methyltransferase nep-1 [Cucumis sativus]7.5e-13689.01Show/hide
Query:  MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNS
        MVRPFA KGKKRKK+EKYDRD    EST+P+KK M+E EP+        E AK+DFHELEGIPI P+DPK+D+NAGVIF+LERASLEVAKVGKNYQLLNS
Subjt:  MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNS

Query:  DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ
        DDHSN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ
Subjt:  DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ

Query:  YLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        YLPAN RKMGFSHSSDKLVK+RNYLDAVKDDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  YLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_008443268.1 PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Cucumis melo]1.5e-13689.36Show/hide
Query:  MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNS
        MVRPFA KGKKRKK EKYDRD    ES++P KK MVE EP+        E  K+DFHELEGIPI+P+DPK+DNNAGVIF+LERASLEVAKVGKNYQLLNS
Subjt:  MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNS

Query:  DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ
        DDHSN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ
Subjt:  DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ

Query:  YLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        YLPAN RKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  YLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_023527836.1 ribosomal RNA small subunit methyltransferase nep-1 [Cucurbita pepo subsp. pepo]4.4e-13689.36Show/hide
Query:  MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNS
        MVRPFA KGKKRKKTE+YDRD+   EST   KK MVE EP+   E   NEAA++ FHELEGIPI+P+DPKSD+ AGVIFVLERASLEVAKVGKNYQLLNS
Subjt:  MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNS

Query:  DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ
        DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ
Subjt:  DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ

Query:  YLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        YLP+NSRKMGFSHSSDKLVK+R YLDAV+DDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  YLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_038905075.1 ribosomal RNA small subunit methyltransferase nep-1 [Benincasa hispida]8.8e-13788.65Show/hide
Query:  MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNS
        MVRPFA KGKKRKK+EKYDRD+ DGEST P KKP  E EP+        E  K+DFHELEGIPI+P+DP SD +AGVIFVLERASLEVAKVGKNYQLLNS
Subjt:  MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNS

Query:  DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ
        DDHSNFLR+NNRNPGDYRPDILHQALLAIFDSRIAKAGRLK VYVKTEKGLLIE+KPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ
Subjt:  DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ

Query:  YLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        YLPANSRKMGFSHSSDKLVKMRNYLDAV+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLAEKWN+G
Subjt:  YLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

TrEMBL top hitse value%identityAlignment
A0A0A0LFI3 Uncharacterized protein3.6e-13689.01Show/hide
Query:  MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNS
        MVRPFA KGKKRKK+EKYDRD    EST+P+KK M+E EP+        E AK+DFHELEGIPI P+DPK+D+NAGVIF+LERASLEVAKVGKNYQLLNS
Subjt:  MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNS

Query:  DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ
        DDHSN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ
Subjt:  DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ

Query:  YLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        YLPAN RKMGFSHSSDKLVK+RNYLDAVKDDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  YLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A1S3B7L0 ribosomal RNA small subunit methyltransferase NEP17.3e-13789.36Show/hide
Query:  MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNS
        MVRPFA KGKKRKK EKYDRD    ES++P KK MVE EP+        E  K+DFHELEGIPI+P+DPK+DNNAGVIF+LERASLEVAKVGKNYQLLNS
Subjt:  MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNS

Query:  DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ
        DDHSN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ
Subjt:  DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ

Query:  YLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        YLPAN RKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  YLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A5D3DPQ6 Ribosomal RNA small subunit methyltransferase NEP17.3e-13789.36Show/hide
Query:  MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNS
        MVRPFA KGKKRKK EKYDRD    ES++P KK MVE EP+        E  K+DFHELEGIPI+P+DPK+DNNAGVIF+LERASLEVAKVGKNYQLLNS
Subjt:  MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNS

Query:  DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ
        DDHSN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ
Subjt:  DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ

Query:  YLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        YLPAN RKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  YLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A6J1F634 ribosomal RNA small subunit methyltransferase nep-14.7e-13689.01Show/hide
Query:  MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNS
        MVRPFA KGKKRKK E+YDRD+   EST   KK MVE EP+   E   NEAA+++FHELEGIPI+P+DPKSD+ AGVIFVLERASLEVAKVGKNYQLLNS
Subjt:  MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNS

Query:  DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ
        DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ
Subjt:  DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ

Query:  YLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        YLP+NSRKMGFSHSSDKLVK+R YLDAV+DDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  YLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A6J1J0G6 ribosomal RNA small subunit methyltransferase nep-16.2e-13689.01Show/hide
Query:  MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNS
        MVRPFA KGKKRKKTE+YDRD+   ES    KK MVE EP+   E   NEAA+++FHELEGIPI+P+DPKSD+ AGVIFVLERASLEVAKVGKNYQLLNS
Subjt:  MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNS

Query:  DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ
        DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ
Subjt:  DDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ

Query:  YLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        YLP+NSRKMGFSHSSDKLVK+R YLDAV+DDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  YLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

SwissProt top hitse value%identityAlignment
O35130 Ribosomal RNA small subunit methyltransferase NEP14.4e-4647.8Show/hide
Query:  VIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLL
        +I VLE ASLE  KVGK Y+LLN D H + L +N R+PG+ RPDI HQ+LL + DS + +AG L+ VY+ T+K +LIE+ P  R+PRT  RF G+M+QLL
Subjt:  VIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLL

Query:  QKLSITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLA
         KLS+ AA   +KL +VIKNPV+ + P    K+G S S + +  +R   + V     +VFVVGA AHGK+   YT+ +++IS YPLSA+   A +     
Subjt:  QKLSITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLA

Query:  EKWNV
        E W V
Subjt:  EKWNV

Q06287 Ribosomal RNA small subunit methyltransferase NEP11.2e-4340.24Show/hide
Query:  EEELVNEAAKQDFHELEGIPIIPRDP-----KSDNNAGVIFVLERASLEVAKVGKN------YQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDS
        E+  V +A K    +     ++P+ P     K      +I VL  ASLE  K+  N      Y LLN DDH   L++  R+  + RPDI HQ LL + DS
Subjt:  EEELVNEAAKQDFHELEGIPIIPRDP-----KSDNNAGVIFVLERASLEVAKVGKN------YQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDS

Query:  RIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDV
         I KAG+L+ VY++T +G+LIE+ P VR+PRT KRF G+M+QLL KLSI +    EKL +VIKNP+T +LP   RK+  S  +  ++++++Y++ + DD 
Subjt:  RIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDV

Query:  DLVFVVGAMAHGK--IETGYTDDLLAISEYPLSASCCIADICKDLAEKWNV
         +   VGAMA GK      Y D+ + +S YPLSAS   +  C    + WN+
Subjt:  DLVFVVGAMAHGK--IETGYTDDLLAISEYPLSASCCIADICKDLAEKWNV

Q92979 Ribosomal RNA small subunit methyltransferase NEP11.7e-4547.8Show/hide
Query:  VIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLL
        +I VLE ASLE  KVGK Y+LLN D H + L +N R+PG+ RPDI HQ+LL + DS + +AG L+ VY+ T+K +LIE+ P  R+PRT  RF G+M+QLL
Subjt:  VIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLL

Query:  QKLSITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLA
         KLS+ AA   +KL +VIKNPV+ + P    K+G S S   +  +R   + V     +VFVVGA AHGK+   YT+ +++IS YPLSA+   A +     
Subjt:  QKLSITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLA

Query:  EKWNV
        E W V
Subjt:  EKWNV

Q9W4J5 Ribosomal RNA small subunit methyltransferase NEP11.8e-4445.24Show/hide
Query:  VIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLL
        +I VLE A LE  KV   ++LLN DDH+  +R+N R+PG  RPDI HQ LL +FDS + +AG L+ V+V+TE  +LIEI P  R+PRT KRF G+M+QLL
Subjt:  VIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLL

Query:  QKLSITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYL-----DAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADI
         K  I A     +L  VIKNP+T ++P   +K   S S   L   R+ +      +   D  +V V+GA AHG ++T YT++L +IS YPLSA+   + I
Subjt:  QKLSITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYL-----DAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADI

Query:  CKDLAEKWNV
        C    E W V
Subjt:  CKDLAEKWNV

Q9XX15 Ribosomal RNA small subunit methyltransferase nep-11.3e-4548.51Show/hide
Query:  VLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKL
        VLE  SLE AKVG  Y +L+SD H+NFLR+  ++P DYRPDILHQ LL + DS + +AG+L+ V+ +T K +L+++ P  R+PRT  RF G+M+QLL KL
Subjt:  VLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKL

Query:  SITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKW
        SI AA   +KL  V+KNPV+ +LP  SRKM  S +  +L  M N L A + D  LV ++G +A GKI   Y D    IS YPLSA+   A +   L E W
Subjt:  SITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKW

Query:  NV
         +
Subjt:  NV

Arabidopsis top hitse value%identityAlignment
AT3G57000.1 nucleolar essential protein-related4.2e-8456.04Show/hide
Query:  MVRPFAVKGKKRK-KTEKYDRDNGD-------------GESTTPTKKPMVEK-EPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERAS
        MVRP+ +K  KRK + E+YD++  +              ES+   KK    + E + DEEE+  EA       + GIPI+   P  +  +G++FVLE+AS
Subjt:  MVRPFAVKGKKRK-KTEKYDRDNGD-------------GESTTPTKKPMVEK-EPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERAS

Query:  LEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAG
        LEVAKVGK YQLLNSDDH+NFL++NNRNP DYRPDI HQALL I DS + KAGRLK VYV+TEKG+L E+KP+VR+PRT KRF G+MLQLLQKLSITA  
Subjt:  LEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAG

Query:  KREKLFRVIKNPVTQ-YLPANSRKMGFSHSSDKLVKMRNYLDAV-KDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNV
         REKL R +KNP+ + +LP NS ++GFSHSS+KLV M+ +L  V  DD D VFVVGAMAHGKI+  Y D+ +++SEYPLSA+ CI+ IC+ LA  WN+
Subjt:  KREKLFRVIKNPVTQ-YLPANSRKMGFSHSSDKLVKMRNYLDAV-KDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCGACCATTTGCGGTGAAGGGGAAGAAAAGAAAGAAGACTGAGAAATACGACAGAGACAATGGCGACGGAGAATCAACCACACCGACCAAGAAGCCTATGGTGGA
GAAGGAACCTGAACCTGATGAAGAAGAACTAGTGAATGAAGCAGCAAAACAAGACTTCCACGAGCTTGAAGGTATTCCAATTATTCCAAGAGACCCCAAAAGCGATAACA
ATGCTGGTGTTATCTTTGTCCTCGAGAGAGCTTCTTTGGAGGTCGCCAAAGTTGGGAAGAACTACCAGCTATTGAATTCTGATGACCACTCCAATTTTTTGCGGAGAAAT
AACAGAAATCCGGGGGATTACAGACCTGATATTTTGCATCAGGCTCTTTTGGCGATTTTTGATAGTCGCATCGCAAAGGCTGGAAGGTTGAAAGTTGTTTATGTGAAAAC
TGAGAAAGGTCTATTAATTGAAATTAAACCGTATGTTCGTCTTCCAAGGACGCAGAAACGGTTCTATGGAGTTATGTTGCAATTGCTACAGAAGTTAAGCATCACAGCTG
CTGGTAAGCGTGAGAAACTTTTCCGGGTGATAAAGAATCCTGTGACTCAGTATTTACCTGCCAATTCTCGTAAGATGGGCTTCTCGCATAGTTCAGACAAGTTGGTCAAG
ATGCGGAATTATTTGGATGCTGTCAAAGATGATGTAGACCTTGTTTTTGTGGTGGGTGCAATGGCTCATGGCAAAATTGAGACTGGTTACACCGATGATCTTTTAGCAAT
TTCTGAGTATCCTCTGAGTGCTAGTTGCTGTATTGCGGATATTTGCAAAGATTTGGCAGAGAAATGGAATGTCGGGTGA
mRNA sequenceShow/hide mRNA sequence
TAAAGATAAATAAATAGAAGGATTTGGAAACCCTAAACACTTCGATCATCCTCTCAGTCTCGCGTGCTCACCTTCTTCTTTACGTCGGCTCCTCCTCCCTCTCTCTCCGG
TTCCGCCAGTGCCGTCGCAGCCTCCTTTAGCAGTTTTCACTGATTCTCTACTCTGTTGTTGGTTGAAATTTTGGGGTGTTACCTCCTCACCCCTCTTCGGAGCTTGAGGC
CAAAAAATACAATGGTTCGACCATTTGCGGTGAAGGGGAAGAAAAGAAAGAAGACTGAGAAATACGACAGAGACAATGGCGACGGAGAATCAACCACACCGACCAAGAAG
CCTATGGTGGAGAAGGAACCTGAACCTGATGAAGAAGAACTAGTGAATGAAGCAGCAAAACAAGACTTCCACGAGCTTGAAGGTATTCCAATTATTCCAAGAGACCCCAA
AAGCGATAACAATGCTGGTGTTATCTTTGTCCTCGAGAGAGCTTCTTTGGAGGTCGCCAAAGTTGGGAAGAACTACCAGCTATTGAATTCTGATGACCACTCCAATTTTT
TGCGGAGAAATAACAGAAATCCGGGGGATTACAGACCTGATATTTTGCATCAGGCTCTTTTGGCGATTTTTGATAGTCGCATCGCAAAGGCTGGAAGGTTGAAAGTTGTT
TATGTGAAAACTGAGAAAGGTCTATTAATTGAAATTAAACCGTATGTTCGTCTTCCAAGGACGCAGAAACGGTTCTATGGAGTTATGTTGCAATTGCTACAGAAGTTAAG
CATCACAGCTGCTGGTAAGCGTGAGAAACTTTTCCGGGTGATAAAGAATCCTGTGACTCAGTATTTACCTGCCAATTCTCGTAAGATGGGCTTCTCGCATAGTTCAGACA
AGTTGGTCAAGATGCGGAATTATTTGGATGCTGTCAAAGATGATGTAGACCTTGTTTTTGTGGTGGGTGCAATGGCTCATGGCAAAATTGAGACTGGTTACACCGATGAT
CTTTTAGCAATTTCTGAGTATCCTCTGAGTGCTAGTTGCTGTATTGCGGATATTTGCAAAGATTTGGCAGAGAAATGGAATGTCGGGTGAACCATGCTTACAACTCTGCA
TCCAGTTAAGTTTGAAAATCAGTGCCTCAACTACCTTGTTTCCTATTTTTAGGTGTTTTTTTTTTTTTGGTGAAACCCATTGAGATGAACTGTAGTGACGAATTAAACCT
TACCATAGCTATATTTTGTCTAGCTAATGCTTAATCGACTAAAATTTCATGAGGCTTCTTCTAAATCTCATTGAAAGGAATAGACGACATTTATTAGTTGTTACAAGTTT
GATAAGAAGTGATTGTATCAGAATTTTAGTGGATAGCGTTTGAGTTCTTGGTTGTGCGTCAGAGGATGTAACTTATGAATTCATGTCCACGATTCAATTTGATGAAATTG
AGTGGGAAAAATGGATCAACCTTCCCACATTGAAGGATA
Protein sequenceShow/hide protein sequence
MVRPFAVKGKKRKKTEKYDRDNGDGESTTPTKKPMVEKEPEPDEEELVNEAAKQDFHELEGIPIIPRDPKSDNNAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRN
NRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVK
MRNYLDAVKDDVDLVFVVGAMAHGKIETGYTDDLLAISEYPLSASCCIADICKDLAEKWNVG