; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016129 (gene) of Snake gourd v1 genome

Gene IDTan0016129
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionYqgFc domain-containing protein
Genome locationLG07:67946342..67949215
RNA-Seq ExpressionTan0016129
SyntenyTan0016129
Gene Ontology termsGO:0000967 - rRNA 5'-end processing (biological process)
InterPro domainsIPR005227 - Putative pre-16S rRNA nuclease
IPR006641 - YqgF/RNase H-like domain
IPR012337 - Ribonuclease H-like superfamily
IPR037027 - YqgF/RNase H-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036046.1 hypothetical protein SDJN02_02846 [Cucurbita argyrosperma subsp. argyrosperma]7.0e-8181.44Show/hide
Query:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNAD--------
        MKYV+PLNLFRDLLK NALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVL RKKTNMHL+A DFQRLISELSL+GFIVGYPFDGQRRN D        
Subjt:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNAD--------

Query:  -----------------AVQVKIFIDELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKPELEER
                         AVQVKIFID+LCKTG LEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLD+FNR+PELEER
Subjt:  -----------------AVQVKIFIDELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKPELEER

XP_022159849.1 uncharacterized protein LOC111026145 [Momordica charantia]3.2e-8190.96Show/hide
Query:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFI
        MKYVKPLN+FRDLL RN LERGRFLGLDVGDKYVGLAVSDPDN IASPLSVLLRKKT MHL+ARD QRLISELSLAGFIVGYPFD QRRNADAVQVKIFI
Subjt:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFI

Query:  DELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKPEL
        D+LCKTG LEGVKYTFWDECFTSKNVELLIKPL+LPP+LSKTI+DKFAAVGILQGYLDY NR+PEL
Subjt:  DELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKPEL

XP_022957830.1 uncharacterized protein LOC111459253 [Cucurbita moschata]3.6e-8593.49Show/hide
Query:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFI
        MKYV+PLNLFRDLLK NALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVL RKKTNMHL+A DFQRLISELSL+GFIVGYPFDGQRRNADAVQVKIFI
Subjt:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFI

Query:  DELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKPELEER
        D+LCKTG LEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLD+FNR+PEL+ER
Subjt:  DELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKPELEER

XP_022995255.1 uncharacterized protein LOC111490857 [Cucurbita maxima]1.6e-8594.08Show/hide
Query:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFI
        MKYV+PLNLFRDLLK NALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVL RKKTNMHL+A DFQRLISELSL+GFIVGYPFDGQRRNADAVQVKIFI
Subjt:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFI

Query:  DELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKPELEER
        D+LCKTG LEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLD+FNR+PELEER
Subjt:  DELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKPELEER

XP_023533829.1 uncharacterized protein LOC111795559 [Cucurbita pepo subsp. pepo]8.0e-8593.49Show/hide
Query:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFI
        MKYV+PLNLFRDLLK NALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVL RKKTNMHL+A DFQRLISELSL+GFIVGYPFDGQRRNADAVQVKIFI
Subjt:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFI

Query:  DELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKPELEER
        D+LCKTG LEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQ YLD+FNR+PELEER
Subjt:  DELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKPELEER

TrEMBL top hitse value%identityAlignment
A0A0A0KMK7 YqgFc domain-containing protein2.4e-7483.93Show/hide
Query:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFI
        MKYV+PL LFRDL KR+ALE GR LGLDVGDKYVGLAVSDPDNKIA PLSVLLRKKT M L+A+DFQ++ISE SLAGFIVGYPFD  R N DA+QVKIFI
Subjt:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFI

Query:  DELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKPELEE
        D+LCKTG LEGVKYTFWDECFTSKNVELLIKPL L P +SKTIIDKFAAVGILQGYLDYFNR+PEL E
Subjt:  DELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKPELEE

A0A1S3ATQ4 putative pre-16S rRNA nuclease isoform X12.7e-7079.76Show/hide
Query:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFI
        MKYVKP  LFRDLLKR+ L+  R LGLDVGDKYVGLAVSDPDNKIASPLSVLLRKK  M L+A DFQ+LISE SLAGFIVGYPFD  R+N +A+QVKIFI
Subjt:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFI

Query:  DELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKPELEE
        D+LCKTG LEGVKYTFWDE FTSKNVE +IKPL L P +SKT++DKFAAVGILQGYLDYFNR+PEL E
Subjt:  DELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKPELEE

A0A6J1E3H7 uncharacterized protein LOC1110261451.5e-8190.96Show/hide
Query:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFI
        MKYVKPLN+FRDLL RN LERGRFLGLDVGDKYVGLAVSDPDN IASPLSVLLRKKT MHL+ARD QRLISELSLAGFIVGYPFD QRRNADAVQVKIFI
Subjt:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFI

Query:  DELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKPEL
        D+LCKTG LEGVKYTFWDECFTSKNVELLIKPL+LPP+LSKTI+DKFAAVGILQGYLDY NR+PEL
Subjt:  DELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKPEL

A0A6J1H0B7 uncharacterized protein LOC1114592531.7e-8593.49Show/hide
Query:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFI
        MKYV+PLNLFRDLLK NALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVL RKKTNMHL+A DFQRLISELSL+GFIVGYPFDGQRRNADAVQVKIFI
Subjt:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFI

Query:  DELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKPELEER
        D+LCKTG LEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLD+FNR+PEL+ER
Subjt:  DELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKPELEER

A0A6J1K3L4 uncharacterized protein LOC1114908577.8e-8694.08Show/hide
Query:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFI
        MKYV+PLNLFRDLLK NALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVL RKKTNMHL+A DFQRLISELSL+GFIVGYPFDGQRRNADAVQVKIFI
Subjt:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFI

Query:  DELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKPELEER
        D+LCKTG LEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLD+FNR+PELEER
Subjt:  DELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKPELEER

SwissProt top hitse value%identityAlignment
A4XKC6 Putative pre-16S rRNA nuclease1.3e-1333.33Show/hide
Query:  RFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKI-FIDELC-------KTGILEGVKY
        R L LD+G + +G+A+SDP    A P  VL  +K +++       ++ +E  +   ++GYP    + + D    K+  IDE+C       K GI++    
Subjt:  RFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKI-FIDELC-------KTGILEGVKY

Query:  TFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFN
          WDE F++K VE +++   +     K ++DK AAV ILQGYLD+ N
Subjt:  TFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFN

B6IN25 Putative pre-16S rRNA nuclease2.5e-1232.43Show/hide
Query:  LKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQ-VKIFIDELCKTGILEGV
        LK +    GR +GLD+G+K +GLAVSDP   +ASP+  + R K      A++  R + +  +   +VG P +         Q V+ F   L +   L G 
Subjt:  LKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQ-VKIFIDELCKTGILEGV

Query:  --KYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLD
          +  FWDE  ++  VE ++    +       ++DK AA  ILQG LD
Subjt:  --KYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLD

B8ZUJ7 Putative pre-16S rRNA nuclease4.2e-1232.65Show/hide
Query:  DLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFIDELCKTGILEG
        DL K    ERGR LG+DVG   +G+A SDPD  +A+P+  + R ++  HL  R    L+ EL +   +VG P+    R   + +  I   E     +   
Subjt:  DLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFIDELCKTGILEG

Query:  VKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLD
        V     DE  T+ + + L++   +     + +ID+ AAV ILQ +LD
Subjt:  VKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLD

B9MRK7 Putative pre-16S rRNA nuclease8.5e-1336.17Show/hide
Query:  RFLGLDVGDKYVGLAVSDPDNKIASP-LSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFIDELC-KTGILEGVKYTFWDEC
        R L LD+G+  VG+A+SDP    A P +++ LR K     +  +  ++    ++   ++GYP      +    ++K  IDE+  K G    V+   WDE 
Subjt:  RFLGLDVGDKYVGLAVSDPDNKIASP-LSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFIDELC-KTGILEGVKYTFWDEC

Query:  FTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFN
        F++K VE +I   +L     K IIDK AAV ILQGYLD++N
Subjt:  FTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFN

Q9CCS9 Putative pre-16S rRNA nuclease4.2e-1232.65Show/hide
Query:  DLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFIDELCKTGILEG
        DL K    ERGR LG+DVG   +G+A SDPD  +A+P+  + R ++  HL  R    L+ EL +   +VG P+    R   + +  I   E     +   
Subjt:  DLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFIDELCKTGILEG

Query:  VKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLD
        V     DE  T+ + + L++   +     + +ID+ AAV ILQ +LD
Subjt:  VKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLD

Arabidopsis top hitse value%identityAlignment
AT3G52905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.8e-5160.49Show/hide
Query:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFI
        MKYVKPL+L  + LK      GRFLGLDVGDKYVGLA+SDP N +ASPLSVLLRKK+N+ L+A DFQ L+   S++G +VGYPF       D V V +FI
Subjt:  MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFI

Query:  DELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNR
        +EL KT  L+ VKYT+WDE  +SK VEL++KPL L P+  KT++DK AAV ILQ YLDY NR
Subjt:  DELCKTGILEGVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTACGTGAAGCCATTGAACTTGTTTCGTGATTTGTTGAAGAGAAACGCCCTTGAACGTGGCCGTTTTCTGGGTTTAGATGTTGGTGATAAGTATGTTGGTTTGGC
CGTCTCTGACCCAGATAATAAAATCGCCTCACCTCTTAGTGTTTTGCTCAGGAAGAAAACAAATATGCATTTGATTGCTCGGGATTTTCAGAGATTGATCTCTGAACTCT
CGCTAGCGGGGTTCATTGTTGGATACCCTTTCGATGGACAACGACGCAACGCCGATGCTGTGCAAGTCAAGATCTTCATCGATGAGCTTTGTAAAACTGGAATACTTGAA
GGCGTAAAATATACTTTTTGGGATGAGTGCTTTACATCAAAGAATGTGGAACTTCTGATAAAGCCATTGAAACTGCCTCCTATTTTGTCAAAGACAATAATTGACAAGTT
TGCTGCTGTTGGAATACTTCAGGGTTACTTGGATTATTTTAACAGAAAACCAGAATTGGAAGAGAGGTAG
mRNA sequenceShow/hide mRNA sequence
GCCCAACTAAACTGATGGCAGGGCTTGATAATGGGCCTAATGGAATTTCAAGGGTTTCCCAAAGGACCGATCCTGGCCGAATCAAATTGGCACTTCTTCCAATAATGAAC
TGCATCGAGGTCTCGAATTCGGGCTTGATTCGTTGTGCTTCAATCTTCCAATCTGCAGCACCGATTGTACGTTCTGGGCATCGAAGGCGCGAAGCTGAAAATGATTTGTA
CGAATCAGCCGCTGGATAACATGCTTCACTGAATTAGATAGGAGTACAAGATGAAGTACGTGAAGCCATTGAACTTGTTTCGTGATTTGTTGAAGAGAAACGCCCTTGAA
CGTGGCCGTTTTCTGGGTTTAGATGTTGGTGATAAGTATGTTGGTTTGGCCGTCTCTGACCCAGATAATAAAATCGCCTCACCTCTTAGTGTTTTGCTCAGGAAGAAAAC
AAATATGCATTTGATTGCTCGGGATTTTCAGAGATTGATCTCTGAACTCTCGCTAGCGGGGTTCATTGTTGGATACCCTTTCGATGGACAACGACGCAACGCCGATGCTG
TGCAAGTCAAGATCTTCATCGATGAGCTTTGTAAAACTGGAATACTTGAAGGCGTAAAATATACTTTTTGGGATGAGTGCTTTACATCAAAGAATGTGGAACTTCTGATA
AAGCCATTGAAACTGCCTCCTATTTTGTCAAAGACAATAATTGACAAGTTTGCTGCTGTTGGAATACTTCAGGGTTACTTGGATTATTTTAACAGAAAACCAGAATTGGA
AGAGAGGTAGAGTAAGATGGATTATACGGGATCAGACACTTGATTCTCCCAGATGGAACAATTTATTTTGAAGCTCAGTCCAAAAAGGGACACTAGATATTCTCTGATAT
TATCGTCAATTTTATCTTAAATTAGTGAATTTATCTGCTCAAAATTACTAATAAGCTAATGGGGCCCCTCTCTTTGGAATTTTCCTTATGGGAATGAAGATTATGTGTTT
GTTTCCATGTTTGTTTATTTCTAAATTATTATTAGTGACAACAATTATACCATACAGTTTGTCTATTTTACAGATCATACTTTTATATTTTAAAAATTGATTCAATTGTC
AGTA
Protein sequenceShow/hide protein sequence
MKYVKPLNLFRDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLIARDFQRLISELSLAGFIVGYPFDGQRRNADAVQVKIFIDELCKTGILE
GVKYTFWDECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKPELEER