CuGenDBv2

Gene ID	Tan0016140
Organism	Trichosanthes anguina (Snake gourd v1)
Description	ALBINO3-like protein 2, chloroplastic
Genome location	LG01:47843933..47844997
RNA-Seq Expression	Tan0016140
Synteny	Tan0016140
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function) GO:0032977 - membrane insertase activity (molecular function)
InterPro domains	IPR001708 - Membrane insertase YidC/ALB3/OXA1/COX18 IPR011990 - Tetratricopeptide-like helical domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7029926.1 ALBINO3-like protein 3, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]

1.5e-37

62.59

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Query:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWKKFSIERLSPKELLAVNYAELNFLFMLFQVN----------
        S+++    ++    +QLTLQHPAVRSKLGLP KDAP+GTATLRE       PLDTPT WKK  +E+LSPKELLAVNYAEL+FLF+L Q++          
Subjt:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWKKFSIERLSPKELLAVNYAELNFLFMLFQVN----------

Query:  --------ALNKEPEYVRALIVMGQTLLQNGQPAEATAYLERAISKV
                ALNK+PEYVRALIVMGQTLLQNGQPAEA A+LERAISK+
Subjt:  --------ALNKEPEYVRALIVMGQTLLQNGQPAEATAYLERAISKV

XP_022933144.1 ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita moschata]

2.1e-31

62.22

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Query:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWKKFSIERLSPKELLAVNYAELN------FLFMLFQVNALNK
        S+++    ++    +QLTLQHPAVRSKLGLP KDAP+GTATLRE       PLDTPT WKK  +E+LSPKELLA++   L+       + +L Q  ALNK
Subjt:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWKKFSIERLSPKELLAVNYAELN------FLFMLFQVNALNK

Query:  EPEYVRALIVMGQTLLQNGQPAEATAYLERAISKV
        +PEYVRALIVMGQTLLQNGQPAEA A+LERAISK+
Subjt:  EPEYVRALIVMGQTLLQNGQPAEATAYLERAISKV

XP_022933145.1 ALBINO3-like protein 2, chloroplastic isoform X2 [Cucurbita moschata]

1.6e-31

61.43

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Query:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWKKFSIERLSPKELLAVNYAELN------FLFMLFQVNALNK
        S+++    ++    +QLTLQHPAVRSKLGLP KDAP+GTATLRE       PLDTPT WKK  +E+LSPKELLA++   L+       + +L Q  ALNK
Subjt:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWKKFSIERLSPKELLAVNYAELN------FLFMLFQVNALNK

Query:  EPEYVRALIVMGQTLLQNGQPAEATAYLERAIS-KVRVQV
        +PEYVRALIVMGQTLLQNGQPAEA A+LERAIS K+RV++
Subjt:  EPEYVRALIVMGQTLLQNGQPAEATAYLERAIS-KVRVQV

XP_022973910.1 ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita maxima]

2.1e-31

62.22

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Query:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWKKFSIERLSPKELLAVNYAELN------FLFMLFQVNALNK
        S+++    ++    +QLTLQHPAVRSKLGLP KDAP+GTATLRE       PLDTPT WKK  +E+LSPKELLA++   L+       + +L Q  ALNK
Subjt:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWKKFSIERLSPKELLAVNYAELN------FLFMLFQVNALNK

Query:  EPEYVRALIVMGQTLLQNGQPAEATAYLERAISKV
        +PEYVRALIVMGQTLLQNGQPAEA A+LERAISK+
Subjt:  EPEYVRALIVMGQTLLQNGQPAEATAYLERAISKV

XP_022973911.1 ALBINO3-like protein 2, chloroplastic isoform X2 [Cucurbita maxima]

1.6e-31

61.43

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Query:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWKKFSIERLSPKELLAVNYAELN------FLFMLFQVNALNK
        S+++    ++    +QLTLQHPAVRSKLGLP KDAP+GTATLRE       PLDTPT WKK  +E+LSPKELLA++   L+       + +L Q  ALNK
Subjt:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWKKFSIERLSPKELLAVNYAELN------FLFMLFQVNALNK

Query:  EPEYVRALIVMGQTLLQNGQPAEATAYLERAIS-KVRVQV
        +PEYVRALIVMGQTLLQNGQPAEA A+LERAIS K+RV++
Subjt:  EPEYVRALIVMGQTLLQNGQPAEATAYLERAIS-KVRVQV

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CTF9 ALBINO3-like protein 2, chloroplastic

1.9e-30

63.57

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Query:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATL-REPLDTPTTWKKFSIERLSPKELLAVNYAELN------FLFMLFQVNALNKEPEYVR
        S+I+    ++    +QLTLQHPAVRSKLGLPLKDAPMGT    + PLDTPT WK+ S+E+LSPKELLA++   L+       + +L Q  ALNKEPEYVR
Subjt:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATL-REPLDTPTTWKKFSIERLSPKELLAVNYAELN------FLFMLFQVNALNKEPEYVR

Query:  ALIVMGQTLLQNGQPAEATAYLERAISKV
        ALIVMGQTLLQ+GQP EAT YLERAISK+
Subjt:  ALIVMGQTLLQNGQPAEATAYLERAISKV

A0A6J1EYX9 ALBINO3-like protein 2, chloroplastic isoform X1

1.0e-31

62.22

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Query:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWKKFSIERLSPKELLAVNYAELN------FLFMLFQVNALNK
        S+++    ++    +QLTLQHPAVRSKLGLP KDAP+GTATLRE       PLDTPT WKK  +E+LSPKELLA++   L+       + +L Q  ALNK
Subjt:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWKKFSIERLSPKELLAVNYAELN------FLFMLFQVNALNK

Query:  EPEYVRALIVMGQTLLQNGQPAEATAYLERAISKV
        +PEYVRALIVMGQTLLQNGQPAEA A+LERAISK+
Subjt:  EPEYVRALIVMGQTLLQNGQPAEATAYLERAISKV

A0A6J1F440 ALBINO3-like protein 2, chloroplastic isoform X2

7.7e-32

61.43

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Query:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWKKFSIERLSPKELLAVNYAELN------FLFMLFQVNALNK
        S+++    ++    +QLTLQHPAVRSKLGLP KDAP+GTATLRE       PLDTPT WKK  +E+LSPKELLA++   L+       + +L Q  ALNK
Subjt:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWKKFSIERLSPKELLAVNYAELN------FLFMLFQVNALNK

Query:  EPEYVRALIVMGQTLLQNGQPAEATAYLERAIS-KVRVQV
        +PEYVRALIVMGQTLLQNGQPAEA A+LERAIS K+RV++
Subjt:  EPEYVRALIVMGQTLLQNGQPAEATAYLERAIS-KVRVQV

A0A6J1I9X8 ALBINO3-like protein 2, chloroplastic isoform X2

7.7e-32

61.43

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Query:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWKKFSIERLSPKELLAVNYAELN------FLFMLFQVNALNK
        S+++    ++    +QLTLQHPAVRSKLGLP KDAP+GTATLRE       PLDTPT WKK  +E+LSPKELLA++   L+       + +L Q  ALNK
Subjt:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWKKFSIERLSPKELLAVNYAELN------FLFMLFQVNALNK

Query:  EPEYVRALIVMGQTLLQNGQPAEATAYLERAIS-KVRVQV
        +PEYVRALIVMGQTLLQNGQPAEA A+LERAIS K+RV++
Subjt:  EPEYVRALIVMGQTLLQNGQPAEATAYLERAIS-KVRVQV

A0A6J1ICK0 ALBINO3-like protein 2, chloroplastic isoform X1

1.0e-31

62.22

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Query:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWKKFSIERLSPKELLAVNYAELN------FLFMLFQVNALNK
        S+++    ++    +QLTLQHPAVRSKLGLP KDAP+GTATLRE       PLDTPT WKK  +E+LSPKELLA++   L+       + +L Q  ALNK
Subjt:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWKKFSIERLSPKELLAVNYAELN------FLFMLFQVNALNK

Query:  EPEYVRALIVMGQTLLQNGQPAEATAYLERAISKV
        +PEYVRALIVMGQTLLQNGQPAEA A+LERAISK+
Subjt:  EPEYVRALIVMGQTLLQNGQPAEATAYLERAISKV

SwissProt top hits

e value

%identity

Alignment

Q0WUC5 ALBINO3-like protein 3, mitochondrial

5.7e-08

33.33

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Query:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDA-------PMGTATLREPLDTPTT-WKKFSIERLSPKELLAVNYAEL-----NFLFMLFQVNALNK
        S+++     +    +Q  L HP V +KLGL   D+       P+ T      L  P++  +  S+  L+PKEL+A++   L     +    L ++ AL K
Subjt:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDA-------PMGTATLREPLDTPTT-WKKFSIERLSPKELLAVNYAEL-----NFLFMLFQVNALNK

Query:  EPEYVRALIVMGQTLLQNGQPAEATAYLERAISKV
        +PEY++A+I++GQ L Q  Q AEA   LE+A SK+
Subjt:  EPEYVRALIVMGQTLLQNGQPAEATAYLERAISKV

Q8L718 ALBINO3-like protein 2, chloroplastic

4.2e-11

35.07

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Query:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMG-------TATLREPLDTPTTWKKFSIERLSPKELLAVNYAELN-----FLFMLFQVNALNKE
        S+++    ++    +QL+L+HP V +KLGL  + A  G       + ++ + +D+ +  +  S++ L+P+ELL+++   L+         L ++ AL K+
Subjt:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMG-------TATLREPLDTPTTWKKFSIERLSPKELLAVNYAELN-----FLFMLFQVNALNKE

Query:  PEYVRALIVMGQTLLQNGQPAEATAYLERAISKV
        P YVR L++MGQ LLQ  Q +EAT YLE AISK+
Subjt:  PEYVRALIVMGQTLLQNGQPAEATAYLERAISKV

Arabidopsis top hits

e value

%identity

Alignment

AT1G65080.1 Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain

3.0e-12

35.07

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Query:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMG-------TATLREPLDTPTTWKKFSIERLSPKELLAVNYAELN-----FLFMLFQVNALNKE
        S+++    ++    +QL+L+HP V +KLGL  + A  G       + ++ + +D+ +  +  S++ L+P+ELL+++   L+         L ++ AL K+
Subjt:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMG-------TATLREPLDTPTTWKKFSIERLSPKELLAVNYAELN-----FLFMLFQVNALNKE

Query:  PEYVRALIVMGQTLLQNGQPAEATAYLERAISKV
        P YVR L++MGQ LLQ  Q +EAT YLE AISK+
Subjt:  PEYVRALIVMGQTLLQNGQPAEATAYLERAISKV

AT3G44370.1 Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain

4.1e-09

33.33

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Query:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDA-------PMGTATLREPLDTPTT-WKKFSIERLSPKELLAVNYAEL-----NFLFMLFQVNALNK
        S+++     +    +Q  L HP V +KLGL   D+       P+ T      L  P++  +  S+  L+PKEL+A++   L     +    L ++ AL K
Subjt:  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDA-------PMGTATLREPLDTPTT-WKKFSIERLSPKELLAVNYAEL-----NFLFMLFQVNALNK

Query:  EPEYVRALIVMGQTLLQNGQPAEATAYLERAISKV
        +PEY++A+I++GQ L Q  Q AEA   LE+A SK+
Subjt:  EPEYVRALIVMGQTLLQNGQPAEATAYLERAISKV

Sequences

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CDS sequence

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ATGATGGTTGGCAAACTTTTTTCAGAAATGATCTGCTTGGATGGATTTCACAAGTCCATCATATTTCCAACTGCCAGAACTACCACGATTTTTGAAAGACAATTAACCCT
CCAACATCCTGCTGTCCGCAGTAAATTGGGATTGCCTCTCAAGGATGCTCCTATGGGCACTGCAACTCTCAGAGAACCGTTGGATACACCCACCACGTGGAAAAAATTTT
CTATAGAGAGGCTGTCTCCTAAGGAATTGCTTGCTGTAAATTATGCTGAGCTCAATTTTCTTTTTATGTTGTTTCAAGTTAATGCACTTAACAAGGAACCTGAGTATGTT
CGGGCTTTGATTGTCATGGGACAAACTCTGTTACAAAATGGTCAACCTGCAGAGGCTACTGCATACTTAGAGCGTGCAATTTCCAAGGTCCGAGTCCAAGTGTTGTATTT
TCTTTTTTCGATTACTGTATGA

mRNA sequence

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Protein sequence

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MMVGKLFSEMICLDGFHKSIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLREPLDTPTTWKKFSIERLSPKELLAVNYAELNFLFMLFQVNALNKEPEYV
RALIVMGQTLLQNGQPAEATAYLERAISKVRVQVLYFLFSITV

Tan0016140 (gene) of Snake gourd v1 genome