; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016143 (gene) of Snake gourd v1 genome

Gene IDTan0016143
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR1-like
Genome locationLG11:7609133..7610592
RNA-Seq ExpressionTan0016143
SyntenyTan0016143
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022133553.1 cyclin-dependent protein kinase inhibitor SMR1 [Momordica charantia]8.0e-5387.12Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDG----GGAELDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEI
        MSMDLEFPKNLPKIRLPLQVRS PKPSNSDNIP   SDRDG G    GG E+D RGCRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFEI
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDG----GGAELDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEI

Query:  VNQEEVDNFFRSAYDLEASSTAPPKRSCCRSA
        VNQEEVDNFFRSAYDLEAS+ AP KRSCCRSA
Subjt:  VNQEEVDNFFRSAYDLEASSTAPPKRSCCRSA

XP_022923009.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata]1.8e-5791.41Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQE
        MSMDLEFP+NLPKIRLPLQVRSPPKPSNS NIPSS SD D    GA+LDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFE VNQE
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQE

Query:  EVDNFFRSAYDLEASSTAPPKRSCCRSA
        EVDNFFRSAYDLEASSTAP KRSCCRSA
Subjt:  EVDNFFRSAYDLEASSTAPPKRSCCRSA

XP_022990487.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima]8.3e-5891.41Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQE
        MSMDLEFP+NLPKIRLPLQVRSPPKPSNS NIPSS SD D    GA+LDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFE VNQE
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQE

Query:  EVDNFFRSAYDLEASSTAPPKRSCCRSA
        EVDNFFRSAYDLEASS APPKRSCCRSA
Subjt:  EVDNFFRSAYDLEASSTAPPKRSCCRSA

XP_023521119.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo]2.2e-5892.19Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQE
        MSMDLEFP+NLPKIRLPLQVRSPPKPSNS NIPSS SD D    GA+LDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFE VNQE
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQE

Query:  EVDNFFRSAYDLEASSTAPPKRSCCRSA
        EVDNFFRSAYDLEASSTAPPKRSCCRSA
Subjt:  EVDNFFRSAYDLEASSTAPPKRSCCRSA

XP_038884240.1 cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida]2.0e-5690.55Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQE
        MSMDLEFPKNLPKIRLPLQVRSPPKPS SDNIPSSASDRD D     LD R CRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFEIVNQE
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQE

Query:  EVDNFFRSAYDLEASSTAPPKRSCCRS
        EVDNFFRSAYDLEASSTAPPKR+CCRS
Subjt:  EVDNFFRSAYDLEASSTAPPKRSCCRS

TrEMBL top hitse value%identityAlignment
A0A1S3C3L4 cyclin-dependent protein kinase inhibitor SMR1-like7.3e-5286.51Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQE
        MSMDLEFPKNLPKIRLPLQVRSPPKPS SDNI  S SD D D     LD R CRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFEIVNQE
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQE

Query:  EVDNFFRSAYDLEASSTAPPKRSCCR
        EVDNFFRSAYDLE+SSTAPPKR+CCR
Subjt:  EVDNFFRSAYDLEASSTAPPKRSCCR

A0A5A7UMQ0 Cyclin-dependent protein kinase inhibitor SMR1-like7.3e-5286.51Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQE
        MSMDLEFPKNLPKIRLPLQVRSPPKPS SDNI  S SD D D     LD R CRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFEIVNQE
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQE

Query:  EVDNFFRSAYDLEASSTAPPKRSCCR
        EVDNFFRSAYDLE+SSTAPPKR+CCR
Subjt:  EVDNFFRSAYDLEASSTAPPKRSCCR

A0A6J1BZG0 cyclin-dependent protein kinase inhibitor SMR13.9e-5387.12Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDG----GGAELDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEI
        MSMDLEFPKNLPKIRLPLQVRS PKPSNSDNIP   SDRDG G    GG E+D RGCRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFEI
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDG----GGAELDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEI

Query:  VNQEEVDNFFRSAYDLEASSTAPPKRSCCRSA
        VNQEEVDNFFRSAYDLEAS+ AP KRSCCRSA
Subjt:  VNQEEVDNFFRSAYDLEASSTAPPKRSCCRSA

A0A6J1E540 cyclin-dependent protein kinase inhibitor SMR1-like8.9e-5891.41Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQE
        MSMDLEFP+NLPKIRLPLQVRSPPKPSNS NIPSS SD D    GA+LDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFE VNQE
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQE

Query:  EVDNFFRSAYDLEASSTAPPKRSCCRSA
        EVDNFFRSAYDLEASSTAP KRSCCRSA
Subjt:  EVDNFFRSAYDLEASSTAPPKRSCCRSA

A0A6J1JIW3 cyclin-dependent protein kinase inhibitor SMR1-like4.0e-5891.41Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQE
        MSMDLEFP+NLPKIRLPLQVRSPPKPSNS NIPSS SD D    GA+LDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFE VNQE
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQE

Query:  EVDNFFRSAYDLEASSTAPPKRSCCRSA
        EVDNFFRSAYDLEASS APPKRSCCRSA
Subjt:  EVDNFFRSAYDLEASSTAPPKRSCCRSA

SwissProt top hitse value%identityAlignment
Q9LPP4 Cyclin-dependent protein kinase inhibitor SMR11.8e-1038.97Show/hide
Query:  MDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKII-SCPGAPRKPKRPPV-----------PCKRKL---
        MDLE  ++L K   P  ++          I S  S    D G  + D   C TPTS EHKIP ++ S P  PRKP+ PP             CKRKL   
Subjt:  MDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKII-SCPGAPRKPKRPPV-----------PCKRKL---

Query:  TMELKFFEIVNQEEVDNFFRSAYDLEASSTAPPKRS
        T E+    I+N+EE+D FF S Y+ E S+TA  +RS
Subjt:  TMELKFFEIVNQEEVDNFFRSAYDLEASSTAPPKRS

Q9LZ78 Cyclin-dependent protein kinase inhibitor SIM9.6e-0934.4Show/hide
Query:  MDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKIISC--PGAPRKPKRPPVP-------CKRKLTMELKF
        MDL+  ++LP +  P  ++             + ++RD DGG       GC TPTS++HKIP   +   P  P+KP+ P  P       CKRKL   L  
Subjt:  MDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKIISC--PGAPRKPKRPPVP-------CKRKLTMELKF

Query:  FE-IVNQEEVDNFFRSAYDLEASST
        +E IVN++E++ FF S Y+   +S+
Subjt:  FE-IVNQEEVDNFFRSAYDLEASST

Q9SGE2 Cyclin-dependent protein kinase inhibitor SMR21.9e-0443.64Show/hide
Query:  TPTSAEHKIPKIISCPGAPRK-PKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF
        TPTS++HKIP++ +CP  PRK P+   +  K +L+ +L+FFE   V  +EV+  F
Subjt:  TPTSAEHKIPKIISCPGAPRK-PKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF

Arabidopsis top hitse value%identityAlignment
AT1G08180.1 unknown protein1.3e-0543.64Show/hide
Query:  TPTSAEHKIPKIISCPGAPRK-PKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF
        TPTS++HKIP++ +CP  PRK P+   +  K +L+ +L+FFE   V  +EV+  F
Subjt:  TPTSAEHKIPKIISCPGAPRK-PKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF

AT3G10525.1 LOSS OF GIANT CELLS FROM ORGANS1.2e-1138.97Show/hide
Query:  MDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKII-SCPGAPRKPKRPPV-----------PCKRKL---
        MDLE  ++L K   P  ++          I S  S    D G  + D   C TPTS EHKIP ++ S P  PRKP+ PP             CKRKL   
Subjt:  MDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKII-SCPGAPRKPKRPPV-----------PCKRKL---

Query:  TMELKFFEIVNQEEVDNFFRSAYDLEASSTAPPKRS
        T E+    I+N+EE+D FF S Y+ E S+TA  +RS
Subjt:  TMELKFFEIVNQEEVDNFFRSAYDLEASSTAPPKRS

AT5G02420.1 unknown protein1.1e-0446.55Show/hide
Query:  DHRGCRTPTSAEHKIP--KIISCPGAPRKPK-RPPVPCKRKLTMELKFFEIVNQEEVD
        +  GC+TPTS++HKIP  K   CP APRKPK       KRKLT       +VN+  +D
Subjt:  DHRGCRTPTSAEHKIP--KIISCPGAPRKPK-RPPVPCKRKLTMELKFFEIVNQEEVD

AT5G04470.1 cyclin-dependent protein kinase inhibitors6.8e-1034.4Show/hide
Query:  MDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKIISC--PGAPRKPKRPPVP-------CKRKLTMELKF
        MDL+  ++LP +  P  ++             + ++RD DGG       GC TPTS++HKIP   +   P  P+KP+ P  P       CKRKL   L  
Subjt:  MDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKIISC--PGAPRKPKRPPVP-------CKRKLTMELKF

Query:  FE-IVNQEEVDNFFRSAYDLEASST
        +E IVN++E++ FF S Y+   +S+
Subjt:  FE-IVNQEEVDNFFRSAYDLEASST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATGGACCTTGAATTCCCCAAAAATCTCCCCAAAATCCGCCTTCCTTTACAGGTCCGATCGCCCCCCAAGCCCTCCAATTCCGACAACATCCCTTCCTCTGCTTC
CGATCGCGACGGAGACGGCGGCGGCGCCGAACTCGACCACCGTGGATGCCGGACGCCGACCTCCGCCGAGCACAAGATTCCGAAGATCATCAGCTGTCCTGGAGCGCCGA
GGAAGCCGAAGCGTCCGCCCGTCCCTTGCAAAAGGAAGTTGACCATGGAGCTCAAGTTCTTCGAGATCGTGAATCAAGAAGAGGTTGATAATTTCTTCCGATCCGCTTAC
GATCTCGAAGCTTCTTCAACGGCGCCGCCGAAGAGGAGCTGTTGCCGGTCGGCCTGA
mRNA sequenceShow/hide mRNA sequence
GTCGGTCCCCAAACCCAACCAGCTAACTCTAGCTGGATTTGGGAAGCAAATGGAGTCAGCTAAGAAGAGAGTTAAAAAGAAGCCATAACCATTCACCAACCTGTCCACTT
CTCATTTTTCTCTGTATTTTTTTTCTCTCTCTCTCTCTCTACTGTCTTTAAAGGCACGTCTTCCAAGTGATTTCCTAAATAAATACTCTTCCACGAGACAAACGCCTTTA
TAGTGTTGTTCATCCATTCACTTTCCTTTCCCCTTTCCTTATTTTTTTTTTCTCCTTCACAAATCCTTTCTCTCTTTCGTCGAATCTTTCAATCTTTCCGCCATGTCCAT
GGACCTTGAATTCCCCAAAAATCTCCCCAAAATCCGCCTTCCTTTACAGGTCCGATCGCCCCCCAAGCCCTCCAATTCCGACAACATCCCTTCCTCTGCTTCCGATCGCG
ACGGAGACGGCGGCGGCGCCGAACTCGACCACCGTGGATGCCGGACGCCGACCTCCGCCGAGCACAAGATTCCGAAGATCATCAGCTGTCCTGGAGCGCCGAGGAAGCCG
AAGCGTCCGCCCGTCCCTTGCAAAAGGAAGTTGACCATGGAGCTCAAGTTCTTCGAGATCGTGAATCAAGAAGAGGTTGATAATTTCTTCCGATCCGCTTACGATCTCGA
AGCTTCTTCAACGGCGCCGCCGAAGAGGAGCTGTTGCCGGTCGGCCTGATAATCCAGATTGCCGGTTTGAGCCCTAAATTACTACACCGATTATAGAAAATCAAATTTTC
GTTAATTCTTTCCTTTTTTTTTTCTTCCTTTTCCTCTTTCTCTCCCATAGTGAGTCAGCTCTTGATGTGTATTATTATTACACGTACATACACATGGAATCCAATCGATT
CGAATCGAATGCAAGTCCTCTTTGCATCATAATCAGAGATAGATAATCGTAATCGGATTATCAACCAAGTAAAACATTTCCAGAAACAAAAAACAAAAAAAGTAAAAAAT
AAATTATGCACATATATTTCTTTTTCTCTCCCCTGAAATTCTCACCGATTTCATGAAATTCACTGCGTTCTTTGATCATTTACGTCTCTATCACCTGCGGATTTCTTGAT
TCTTGATCTGAAATTCCAAATCGAACTCGTGGAAGTTGGAAACCCTAACTATTTCGTATGACTGTTGTTTGAATGAATTCGATCTGTGGCTGCAATAGTTGAGCTATAGA
GATCATGAATTTGATATTGATAATGAAATTACACGATCGTGTTGATGATTTCTTCAATTCTGTTTTGGGATTGAGATAGAGTTTGATTTTGATCTGCAGATTTGTGCCCT
GATTTCTTTTTCTTGTTGAGTAATTGACACGGCTTTGGGGGTTTTTTTTTTATATATATATTCTATTTTGATCAATTTCCAGAGAGAGATGAATTGGAATTTTTCCAATT
TCCAATTTCCAATTGCAATTTCAAATTTTA
Protein sequenceShow/hide protein sequence
MSMDLEFPKNLPKIRLPLQVRSPPKPSNSDNIPSSASDRDGDGGGAELDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAY
DLEASSTAPPKRSCCRSA