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Tan0016175 (gene) of Snake gourd v1 genome

Gene IDTan0016175
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionZinc ion binding / nucleic acid binding protein
Genome locationContig00127:145047..146145
RNA-Seq ExpressionTan0016175
SyntenyTan0016175
Gene Ontology termsGO:0015031 - protein transport (biological process)
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF27683.1 conserved hypothetical protein [Ricinus communis]1.3e-1876.32Show/hide
Query:  APTTEVSLRDSDVAAADMQTIEDGPRGEELEPDNNPQASVLQQPEYLAIGKSPSVNAAPNTGGSSASWGQQEEERV
        APT E       + AADMQTIEDGPRGEELEPDNNPQA VL++ EYLAIGKSPSVNAA NTGGSS S GQQEEE V
Subjt:  APTTEVSLRDSDVAAADMQTIEDGPRGEELEPDNNPQASVLQQPEYLAIGKSPSVNAAPNTGGSSASWGQQEEERV

KAA0059498.1 hypothetical protein E6C27_scaffold48829G00010 [Cucumis melo var. makuwa]9.0e-4154.25Show/hide
Query:  RTVVREFARKNWRTKGDLSITLLDPRHVFIKLSNKEDMHQKEKFLIEGLMFRVFCWSHDFRLRNGDPMHAPIWVSRPHLPIVFFFEFRLFSIVSTFGIGL
        RTVVREFARKNWRTKG                    D   + K       FR               +     + R H PIVFFF    F  VSTFGIGL
Subjt:  RTVVREFARKNWRTKGDLSITLLDPRHVFIKLSNKEDMHQKEKFLIEGLMFRVFCWSHDFRLRNGDPMHAPIWVSRPHLPIVFFFEFRLFSIVSTFGIGL

Query:  TLEGPTKLVSRPPLTIKLGCQPVTENGLCSKNQCYPAPTTEVSLRDSDVAAADMQTIEDGPRGEELEPDNNPQASVLQQPEYLAIGKSPSVNAAPNTGGS
        TLEGPTKLVSRPPL IKLG     ++ L S  +        V+    +VAAADM+TI DGPRGEELEPD NPQAS+LQ+P YLAIGKSPSV AAPNTGGS
Subjt:  TLEGPTKLVSRPPLTIKLGCQPVTENGLCSKNQCYPAPTTEVSLRDSDVAAADMQTIEDGPRGEELEPDNNPQASVLQQPEYLAIGKSPSVNAAPNTGGS

Query:  SASWGQQEEERV
        SASWGQQEEERV
Subjt:  SASWGQQEEERV

TYK04334.1 hypothetical protein E5676_scaffold84043G00010 [Cucumis melo var. makuwa]9.0e-4154.25Show/hide
Query:  RTVVREFARKNWRTKGDLSITLLDPRHVFIKLSNKEDMHQKEKFLIEGLMFRVFCWSHDFRLRNGDPMHAPIWVSRPHLPIVFFFEFRLFSIVSTFGIGL
        RTVVREFARKNWRTKG                    D   + K       FR               +     + R H PIVFFF    F  VSTFGIGL
Subjt:  RTVVREFARKNWRTKGDLSITLLDPRHVFIKLSNKEDMHQKEKFLIEGLMFRVFCWSHDFRLRNGDPMHAPIWVSRPHLPIVFFFEFRLFSIVSTFGIGL

Query:  TLEGPTKLVSRPPLTIKLGCQPVTENGLCSKNQCYPAPTTEVSLRDSDVAAADMQTIEDGPRGEELEPDNNPQASVLQQPEYLAIGKSPSVNAAPNTGGS
        TLEGPTKLVSRPPL IKLG     ++ L S  +        V+    +VAAADM+TI DGPRGEELEPD NPQAS+LQ+P YLAIGKSPSV AAPNTGGS
Subjt:  TLEGPTKLVSRPPLTIKLGCQPVTENGLCSKNQCYPAPTTEVSLRDSDVAAADMQTIEDGPRGEELEPDNNPQASVLQQPEYLAIGKSPSVNAAPNTGGS

Query:  SASWGQQEEERV
        SASWGQQEEERV
Subjt:  SASWGQQEEERV

VVA33529.1 PREDICTED: IST1 [Prunus dulcis]2.9e-3193.15Show/hide
Query:  QKEKFLIEGLMFRVFCWSHDFRLRNGDPMHAPIWVSRPHLPIVFFFEFRLFSIVSTFGIGLTLEGPTKLVSRP
        +KEKFLIEGLM RVF WSHDFRLRNGDPMHAPIWVSRPHLPIVFFFEFRLFSIVS FGIGLTL+GPTKLVSRP
Subjt:  QKEKFLIEGLMFRVFCWSHDFRLRNGDPMHAPIWVSRPHLPIVFFFEFRLFSIVSTFGIGLTLEGPTKLVSRP

WP_131796640.1 DUF4283 domain-containing protein [Candidatus Frankia datiscae]3.2e-3095.59Show/hide
Query:  LIEGLMFRVFCWSHDFRLRNGDPMHAPIWVSRPHLPIVFFFEFRLFSIVSTFGIGLTLEGPTKLVSRP
        +IEGLMFRVFCWSHDFRLRNGDPMHAPIWVSRPHLP VFFFEF LFSIVSTFGIGLTLEGPTKLVSRP
Subjt:  LIEGLMFRVFCWSHDFRLRNGDPMHAPIWVSRPHLPIVFFFEFRLFSIVSTFGIGLTLEGPTKLVSRP

TrEMBL top hitse value%identityAlignment
A0A5A7UWF6 Uncharacterized protein4.3e-4154.25Show/hide
Query:  RTVVREFARKNWRTKGDLSITLLDPRHVFIKLSNKEDMHQKEKFLIEGLMFRVFCWSHDFRLRNGDPMHAPIWVSRPHLPIVFFFEFRLFSIVSTFGIGL
        RTVVREFARKNWRTKG                    D   + K       FR               +     + R H PIVFFF    F  VSTFGIGL
Subjt:  RTVVREFARKNWRTKGDLSITLLDPRHVFIKLSNKEDMHQKEKFLIEGLMFRVFCWSHDFRLRNGDPMHAPIWVSRPHLPIVFFFEFRLFSIVSTFGIGL

Query:  TLEGPTKLVSRPPLTIKLGCQPVTENGLCSKNQCYPAPTTEVSLRDSDVAAADMQTIEDGPRGEELEPDNNPQASVLQQPEYLAIGKSPSVNAAPNTGGS
        TLEGPTKLVSRPPL IKLG     ++ L S  +        V+    +VAAADM+TI DGPRGEELEPD NPQAS+LQ+P YLAIGKSPSV AAPNTGGS
Subjt:  TLEGPTKLVSRPPLTIKLGCQPVTENGLCSKNQCYPAPTTEVSLRDSDVAAADMQTIEDGPRGEELEPDNNPQASVLQQPEYLAIGKSPSVNAAPNTGGS

Query:  SASWGQQEEERV
        SASWGQQEEERV
Subjt:  SASWGQQEEERV

A0A5D3BZC3 Uncharacterized protein4.3e-4154.25Show/hide
Query:  RTVVREFARKNWRTKGDLSITLLDPRHVFIKLSNKEDMHQKEKFLIEGLMFRVFCWSHDFRLRNGDPMHAPIWVSRPHLPIVFFFEFRLFSIVSTFGIGL
        RTVVREFARKNWRTKG                    D   + K       FR               +     + R H PIVFFF    F  VSTFGIGL
Subjt:  RTVVREFARKNWRTKGDLSITLLDPRHVFIKLSNKEDMHQKEKFLIEGLMFRVFCWSHDFRLRNGDPMHAPIWVSRPHLPIVFFFEFRLFSIVSTFGIGL

Query:  TLEGPTKLVSRPPLTIKLGCQPVTENGLCSKNQCYPAPTTEVSLRDSDVAAADMQTIEDGPRGEELEPDNNPQASVLQQPEYLAIGKSPSVNAAPNTGGS
        TLEGPTKLVSRPPL IKLG     ++ L S  +        V+    +VAAADM+TI DGPRGEELEPD NPQAS+LQ+P YLAIGKSPSV AAPNTGGS
Subjt:  TLEGPTKLVSRPPLTIKLGCQPVTENGLCSKNQCYPAPTTEVSLRDSDVAAADMQTIEDGPRGEELEPDNNPQASVLQQPEYLAIGKSPSVNAAPNTGGS

Query:  SASWGQQEEERV
        SASWGQQEEERV
Subjt:  SASWGQQEEERV

A0A5E4G1B8 PREDICTED: IST11.4e-3193.15Show/hide
Query:  QKEKFLIEGLMFRVFCWSHDFRLRNGDPMHAPIWVSRPHLPIVFFFEFRLFSIVSTFGIGLTLEGPTKLVSRP
        +KEKFLIEGLM RVF WSHDFRLRNGDPMHAPIWVSRPHLPIVFFFEFRLFSIVS FGIGLTL+GPTKLVSRP
Subjt:  QKEKFLIEGLMFRVFCWSHDFRLRNGDPMHAPIWVSRPHLPIVFFFEFRLFSIVSTFGIGLTLEGPTKLVSRP

A0A6P6VHH0 uncharacterized protein LOC1137218473.0e-1039.6Show/hide
Query:  KGDLSITLLDPRHVFIKLSNKEDMHQ---KEKFLIEGLMFRVFCWSHDFRLRNGDPMHAPIWVSRPHLPIVFFFEFRLFSIVSTFGIGLTLEGPTKLVSR
        KG++S+ LLD RHV I+L +K+D H+   +    + G   RVF W+  F + + +P   P+W S P LPI FF +  LF IVS  G  L ++  T  ++R
Subjt:  KGDLSITLLDPRHVFIKLSNKEDMHQ---KEKFLIEGLMFRVFCWSHDFRLRNGDPMHAPIWVSRPHLPIVFFFEFRLFSIVSTFGIGLTLEGPTKLVSR

Query:  P
        P
Subjt:  P

B9T8X8 Uncharacterized protein6.1e-1976.32Show/hide
Query:  APTTEVSLRDSDVAAADMQTIEDGPRGEELEPDNNPQASVLQQPEYLAIGKSPSVNAAPNTGGSSASWGQQEEERV
        APT E       + AADMQTIEDGPRGEELEPDNNPQA VL++ EYLAIGKSPSVNAA NTGGSS S GQQEEE V
Subjt:  APTTEVSLRDSDVAAADMQTIEDGPRGEELEPDNNPQASVLQQPEYLAIGKSPSVNAAPNTGGSSASWGQQEEERV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGACGGTAGTTCGGGAGTTCGCTCGAAAGAACTGGCGTACCAAGGGGGATCTTTCGATCACTCTGTTAGATCCAAGGCACGTCTTCATCAAGCTCTCGAACAAAGA
AGATATGCACCAAAAAGAGAAGTTTTTGATTGAGGGATTGATGTTTAGGGTTTTCTGCTGGAGCCATGATTTCCGTCTCCGCAATGGTGATCCAATGCATGCGCCTATTT
GGGTATCGCGACCCCATCTGCCTATTGTCTTCTTCTTTGAGTTTCGCCTGTTTTCTATCGTCTCGACTTTCGGAATTGGCCTGACCCTTGAAGGTCCTACGAAGCTTGTC
TCACGCCCCCCTCTCACAATAAAGCTAGGGTGTCAACCCGTCACCGAGAATGGCCTATGTTCCAAGAACCAATGCTACCCAGCACCTACCACTGAAGTTAGCCTTCGTGA
TTCAGATGTTGCTGCTGCTGACATGCAAACCATTGAAGATGGTCCTCGGGGCGAAGAGCTTGAACCAGATAACAATCCCCAAGCTTCTGTTCTTCAACAACCGGAGTATT
TAGCTATTGGAAAATCGCCTTCGGTTAACGCAGCCCCTAATACCGGCGGTAGCTCTGCCTCATGGGGACAGCAGGAAGAGGAAAGAGTTTGA
mRNA sequenceShow/hide mRNA sequence
CCCTGACAAACTTTCTGTCTAACTGTCGAGATCTCTTGCTCGGTGTGCTCGTTACTCGTTTAGCTCGGCAAGCAAGTAAGTAATTTTTCCTCAGCGTTTCGTTTCTAAGC
TAGGTGACCTGAGCTTGGGGATTTTGTTTAGTTAGTAAGGGAGTAGGCAGGGGGGGAGTCAAAGGGTGGGAATAGATTGTAGTGAATTGTGGGAGTTTCTAAGGAAAGCT
ATCTTCTCAAAGTCAAATCTTCAAAAGGATGGAGTTCCAGCAAAACCCTTTCTAAGGATGAGGACGGTAGTTCGGGAGTTCGCTCGAAAGAACTGGCGTACCAAGGGGGA
TCTTTCGATCACTCTGTTAGATCCAAGGCACGTCTTCATCAAGCTCTCGAACAAAGAAGATATGCACCAAAAAGAGAAGTTTTTGATTGAGGGATTGATGTTTAGGGTTT
TCTGCTGGAGCCATGATTTCCGTCTCCGCAATGGTGATCCAATGCATGCGCCTATTTGGGTATCGCGACCCCATCTGCCTATTGTCTTCTTCTTTGAGTTTCGCCTGTTT
TCTATCGTCTCGACTTTCGGAATTGGCCTGACCCTTGAAGGTCCTACGAAGCTTGTCTCACGCCCCCCTCTCACAATAAAGCTAGGGTGTCAACCCGTCACCGAGAATGG
CCTATGTTCCAAGAACCAATGCTACCCAGCACCTACCACTGAAGTTAGCCTTCGTGATTCAGATGTTGCTGCTGCTGACATGCAAACCATTGAAGATGGTCCTCGGGGCG
AAGAGCTTGAACCAGATAACAATCCCCAAGCTTCTGTTCTTCAACAACCGGAGTATTTAGCTATTGGAAAATCGCCTTCGGTTAACGCAGCCCCTAATACCGGCGGTAGC
TCTGCCTCATGGGGACAGCAGGAAGAGGAAAGAGTTTGA
Protein sequenceShow/hide protein sequence
MRTVVREFARKNWRTKGDLSITLLDPRHVFIKLSNKEDMHQKEKFLIEGLMFRVFCWSHDFRLRNGDPMHAPIWVSRPHLPIVFFFEFRLFSIVSTFGIGLTLEGPTKLV
SRPPLTIKLGCQPVTENGLCSKNQCYPAPTTEVSLRDSDVAAADMQTIEDGPRGEELEPDNNPQASVLQQPEYLAIGKSPSVNAAPNTGGSSASWGQQEEERV