; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016184 (gene) of Snake gourd v1 genome

Gene IDTan0016184
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG11:32678176..32679473
RNA-Seq ExpressionTan0016184
SyntenyTan0016184
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]5.6e-1741.61Show/hide
Query:  RGKASSSKGKSPTSSSN-IPAPMSADQYAMDLGFTQAIGLLMRDL--------FAVTPMRPSVS-------------PTTPSSSQQGSSIPTTFVEAVNP
        R  ++SSKG  P SSSN  P+P+SADQYAMDLGFT     + R           + TP RPS +             P +PSS+++ S+ PTT+ +AV P
Subjt:  RGKASSSKGKSPTSSSN-IPAPMSADQYAMDLGFTQAIGLLMRDL--------FAVTPMRPSVS-------------PTTPSSSQQGSSIPTTFVEAVNP

Query:  PKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKS
         KRF+P+PEIK+YF+KP+ + +PI+E+E+    + ++
Subjt:  PKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKS

KAA0049709.1 hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]5.3e-1537.82Show/hide
Query:  RGKASSSKGKSPTSSSN-IPAPMSADQYAMDLGFTQAIGLLMRD--------LFAVTPMRPSV-------------SPTTPSSSQQGSSIPTTFVEAVNP
        R  ++SSKG  P+SSSN  P+PMSADQYAMDLGFT       R           + TP +PS              SP +PSS+++ S+ PTT+ +AV P
Subjt:  RGKASSSKGKSPTSSSN-IPAPMSADQYAMDLGFTQAIGLLMRD--------LFAVTPMRPSV-------------SPTTPSSSQQGSSIPTTFVEAVNP

Query:  PKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSKLLAALAQTTTEADLQKILNQVTSIASSSSPQNSEVEEDD-----EYDINDPFLDS
         KR                                 SKLLAALAQ TT+AD Q++L+   + +SSS   +S ++ED+     EYD++DP+LDS
Subjt:  PKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSKLLAALAQTTTEADLQKILNQVTSIASSSSPQNSEVEEDD-----EYDINDPFLDS

KAA0053156.1 hypothetical protein E6C27_scaffold1248G00100 [Cucumis melo var. makuwa]8.1e-1636.32Show/hide
Query:  MSDQRGKA------SSSKGKSPTSSSNI-PAPMSADQYAMDLGFTQAIGLLMRD--------LFAVTPMRPSVS-------------PTTPSSSQQGSSI
        MS ++G A      +SSKG  P+SSSN  P+PMS DQYAM LGFT       R           ++TP RP  +             PT+P S+++ S+ 
Subjt:  MSDQRGKA------SSSKGKSPTSSSNI-PAPMSADQYAMDLGFTQAIGLLMRD--------LFAVTPMRPSVS-------------PTTPSSSQQGSSI

Query:  PTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSKLLAALAQTTTEADLQKILNQVTSIASSSSPQNSEVEEDDEYDINDPFLDSQP
        PTT+ +AV P KRF+P+ EIK+YF+KP  + +PI+E  +                                  +SSS Q  E + D EYD++D FLDSQP
Subjt:  PTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSKLLAALAQTTTEADLQKILNQVTSIASSSSPQNSEVEEDDEYDINDPFLDSQP

Query:  M
        M
Subjt:  M

KAA0066384.1 hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa]1.3e-1637.31Show/hide
Query:  MSDQRGKA------SSSKGKSPTSSSN-IPAPMSADQYAMDLGFTQA-----------IGLLMRDLFAVTPMRPSVS-------------PTTPSSSQQG
        MS ++G A      +SSKG   +SSSN  P+P  ADQYAM++GFT             IG L     + TP RPSV+             P +PSS+++ 
Subjt:  MSDQRGKA------SSSKGKSPTSSSN-IPAPMSADQYAMDLGFTQA-----------IGLLMRDLFAVTPMRPSVS-------------PTTPSSSQQG

Query:  SSIPTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSKLLAALAQTTTEADLQKILNQVTSIASSSSPQNSEVEEDDEYDINDPFLD
        S+  TT+ +AV P KRF+P+PEIK+YF+K + + +PI+E+E+    +S SK                        + SSS Q  E + D EYD++DPFLD
Subjt:  SSIPTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSKLLAALAQTTTEADLQKILNQVTSIASSSSPQNSEVEEDDEYDINDPFLD

Query:  S
        S
Subjt:  S

TYJ98361.1 hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]9.9e-3042.92Show/hide
Query:  MSDQRGKA------SSSKGKSPTSSSN-IPAPMSADQYAMDLGFTQAI-------GLLMRD-LFAVTPMRPSV-------------SPTTPSSSQQGSSI
        MS ++G A      +SSKG  P+SSSN  P+PMS DQYAMDLG+T  I       G+ +R  + + TP RPSV             S  +PSS+++ S++
Subjt:  MSDQRGKA------SSSKGKSPTSSSN-IPAPMSADQYAMDLGFTQAI-------GLLMRD-LFAVTPMRPSV-------------SPTTPSSSQQGSSI

Query:  PTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFD--------------EFLNSKSKLLAALAQTTTEADLQKILNQVTSIASSSSPQNSEVEED
        PTT+ +AV P K+F+P+ EIK+YF+KP+ I +PI+E+E+               +FLN K K LAAL Q T +AD Q++L+   + +SSS P  S ++ED
Subjt:  PTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFD--------------EFLNSKSKLLAALAQTTTEADLQKILNQVTSIASSSSPQNSEVEED

Query:  D-----EYDINDPFLDSQP
        +     EYD++DPFLDSQP
Subjt:  D-----EYDINDPFLDSQP

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein2.7e-1741.61Show/hide
Query:  RGKASSSKGKSPTSSSN-IPAPMSADQYAMDLGFTQAIGLLMRDL--------FAVTPMRPSVS-------------PTTPSSSQQGSSIPTTFVEAVNP
        R  ++SSKG  P SSSN  P+P+SADQYAMDLGFT     + R           + TP RPS +             P +PSS+++ S+ PTT+ +AV P
Subjt:  RGKASSSKGKSPTSSSN-IPAPMSADQYAMDLGFTQAIGLLMRDL--------FAVTPMRPSVS-------------PTTPSSSQQGSSIPTTFVEAVNP

Query:  PKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKS
         KRF+P+PEIK+YF+KP+ + +PI+E+E+    + ++
Subjt:  PKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKS

A0A5A7U8A0 Uncharacterized protein2.5e-1537.82Show/hide
Query:  RGKASSSKGKSPTSSSN-IPAPMSADQYAMDLGFTQAIGLLMRD--------LFAVTPMRPSV-------------SPTTPSSSQQGSSIPTTFVEAVNP
        R  ++SSKG  P+SSSN  P+PMSADQYAMDLGFT       R           + TP +PS              SP +PSS+++ S+ PTT+ +AV P
Subjt:  RGKASSSKGKSPTSSSN-IPAPMSADQYAMDLGFTQAIGLLMRD--------LFAVTPMRPSV-------------SPTTPSSSQQGSSIPTTFVEAVNP

Query:  PKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSKLLAALAQTTTEADLQKILNQVTSIASSSSPQNSEVEEDD-----EYDINDPFLDS
         KR                                 SKLLAALAQ TT+AD Q++L+   + +SSS   +S ++ED+     EYD++DP+LDS
Subjt:  PKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSKLLAALAQTTTEADLQKILNQVTSIASSSSPQNSEVEEDD-----EYDINDPFLDS

A0A5A7UFZ9 Uncharacterized protein3.9e-1636.32Show/hide
Query:  MSDQRGKA------SSSKGKSPTSSSNI-PAPMSADQYAMDLGFTQAIGLLMRD--------LFAVTPMRPSVS-------------PTTPSSSQQGSSI
        MS ++G A      +SSKG  P+SSSN  P+PMS DQYAM LGFT       R           ++TP RP  +             PT+P S+++ S+ 
Subjt:  MSDQRGKA------SSSKGKSPTSSSNI-PAPMSADQYAMDLGFTQAIGLLMRD--------LFAVTPMRPSVS-------------PTTPSSSQQGSSI

Query:  PTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSKLLAALAQTTTEADLQKILNQVTSIASSSSPQNSEVEEDDEYDINDPFLDSQP
        PTT+ +AV P KRF+P+ EIK+YF+KP  + +PI+E  +                                  +SSS Q  E + D EYD++D FLDSQP
Subjt:  PTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSKLLAALAQTTTEADLQKILNQVTSIASSSSPQNSEVEEDDEYDINDPFLDSQP

Query:  M
        M
Subjt:  M

A0A5D3BI61 Uncharacterized protein4.8e-3042.92Show/hide
Query:  MSDQRGKA------SSSKGKSPTSSSN-IPAPMSADQYAMDLGFTQAI-------GLLMRD-LFAVTPMRPSV-------------SPTTPSSSQQGSSI
        MS ++G A      +SSKG  P+SSSN  P+PMS DQYAMDLG+T  I       G+ +R  + + TP RPSV             S  +PSS+++ S++
Subjt:  MSDQRGKA------SSSKGKSPTSSSN-IPAPMSADQYAMDLGFTQAI-------GLLMRD-LFAVTPMRPSV-------------SPTTPSSSQQGSSI

Query:  PTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFD--------------EFLNSKSKLLAALAQTTTEADLQKILNQVTSIASSSSPQNSEVEED
        PTT+ +AV P K+F+P+ EIK+YF+KP+ I +PI+E+E+               +FLN K K LAAL Q T +AD Q++L+   + +SSS P  S ++ED
Subjt:  PTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFD--------------EFLNSKSKLLAALAQTTTEADLQKILNQVTSIASSSSPQNSEVEED

Query:  D-----EYDINDPFLDSQP
        +     EYD++DPFLDSQP
Subjt:  D-----EYDINDPFLDSQP

A0A5D3BPD3 Uncharacterized protein6.1e-1737.31Show/hide
Query:  MSDQRGKA------SSSKGKSPTSSSN-IPAPMSADQYAMDLGFTQA-----------IGLLMRDLFAVTPMRPSVS-------------PTTPSSSQQG
        MS ++G A      +SSKG   +SSSN  P+P  ADQYAM++GFT             IG L     + TP RPSV+             P +PSS+++ 
Subjt:  MSDQRGKA------SSSKGKSPTSSSN-IPAPMSADQYAMDLGFTQA-----------IGLLMRDLFAVTPMRPSVS-------------PTTPSSSQQG

Query:  SSIPTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSKLLAALAQTTTEADLQKILNQVTSIASSSSPQNSEVEEDDEYDINDPFLD
        S+  TT+ +AV P KRF+P+PEIK+YF+K + + +PI+E+E+    +S SK                        + SSS Q  E + D EYD++DPFLD
Subjt:  SSIPTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSKLLAALAQTTTEADLQKILNQVTSIASSSSPQNSEVEEDDEYDINDPFLD

Query:  S
        S
Subjt:  S

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGATCAGCGAGGCAAAGCCTCATCTTCAAAGGGCAAAAGCCCAACCTCTTCTTCAAACATTCCAGCTCCCATGAGCGCCGATCAATACGCAATGGATCTGGGTTT
CACTCAGGCCATCGGCCTCCTCATGCGCGACCTCTTTGCCGTTACACCAATGAGACCTTCCGTCTCACCTACTACTCCATCTTCGTCTCAACAGGGATCTTCAATCCCTA
CAACCTTTGTTGAAGCCGTCAATCCTCCCAAAAGGTTTATCCCTAAACCTGAAATCAAAAATTATTTCGAAAAACCACTTCAAATTTCTGAGCCAATTGTCGAAGTTGAA
TTCGATGAGTTCCTCAATTCAAAATCAAAGCTGCTAGCTGCCTTAGCACAAACAACAACAGAGGCAGATTTACAAAAAATCTTGAATCAAGTTACTTCAATAGCATCTTC
GTCTTCTCCACAAAACTCTGAAGTGGAAGAAGATGATGAATATGATATCAATGATCCGTTTTTAGATTCCCAACCAATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGATCAGCGAGGCAAAGCCTCATCTTCAAAGGGCAAAAGCCCAACCTCTTCTTCAAACATTCCAGCTCCCATGAGCGCCGATCAATACGCAATGGATCTGGGTTT
CACTCAGGCCATCGGCCTCCTCATGCGCGACCTCTTTGCCGTTACACCAATGAGACCTTCCGTCTCACCTACTACTCCATCTTCGTCTCAACAGGGATCTTCAATCCCTA
CAACCTTTGTTGAAGCCGTCAATCCTCCCAAAAGGTTTATCCCTAAACCTGAAATCAAAAATTATTTCGAAAAACCACTTCAAATTTCTGAGCCAATTGTCGAAGTTGAA
TTCGATGAGTTCCTCAATTCAAAATCAAAGCTGCTAGCTGCCTTAGCACAAACAACAACAGAGGCAGATTTACAAAAAATCTTGAATCAAGTTACTTCAATAGCATCTTC
GTCTTCTCCACAAAACTCTGAAGTGGAAGAAGATGATGAATATGATATCAATGATCCGTTTTTAGATTCCCAACCAATGTAG
Protein sequenceShow/hide protein sequence
MSDQRGKASSSKGKSPTSSSNIPAPMSADQYAMDLGFTQAIGLLMRDLFAVTPMRPSVSPTTPSSSQQGSSIPTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVE
FDEFLNSKSKLLAALAQTTTEADLQKILNQVTSIASSSSPQNSEVEEDDEYDINDPFLDSQPM