; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016188 (gene) of Snake gourd v1 genome

Gene IDTan0016188
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationLG05:77364472..77366504
RNA-Seq ExpressionTan0016188
SyntenyTan0016188
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583907.1 hypothetical protein SDJN03_19839, partial [Cucurbita argyrosperma subsp. sororia]7.6e-9779.5Show/hide
Query:  PPPAPPGFPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSSRRNPPPLPIETNSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS
        PPP PP   SLHS+FFSSLKQVEKRLKLDHPSQRDA  PPS RR    LP+E  SSSS EESLS+PMYLHLPQTNT+S+LQESSEPP EFLSNS     S
Subjt:  PPPAPPGFPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSSRRNPPPLPIETNSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS

Query:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQKLGAKSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIKYFLNGDGDDGEEERLEPLR
           S+SN PN IDCG NRPVDDIQ+L+QLLGLGDS +EQ+LGA+SGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWI+Y  NG    GE ERLEPLR
Subjt:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQKLGAKSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIKYFLNGDGDDGEEERLEPLR

Query:  LAYLLLGKAVFASNGSGECLEGLEFPSTVEDFLLNDPPA
        LAYLL+GKAVFASNGS  CLEGLEFPSTVEDFLLNDPPA
Subjt:  LAYLLLGKAVFASNGSGECLEGLEFPSTVEDFLLNDPPA

KAG7019524.1 hypothetical protein SDJN02_18485 [Cucurbita argyrosperma subsp. argyrosperma]4.5e-9779.08Show/hide
Query:  PPPAPPGFPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSSRRNPPPLPIETNSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS
        PPP PP   SLHS+FFSSLKQVEKRLK D+PSQRDA  PPS RR  P LP+E +SSSS EESLS+PMYLHLPQTNT+S+LQESSEPP EFLSNS     S
Subjt:  PPPAPPGFPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSSRRNPPPLPIETNSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS

Query:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQKLGAKSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIKYFLNGDGDDGEEERLEPLR
           S+SN PN IDCG+NRPVDDIQ+L+QLLGLGDS +EQ+LGA+SGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWI+YF  G    GE ERLEPLR
Subjt:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQKLGAKSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIKYFLNGDGDDGEEERLEPLR

Query:  LAYLLLGKAVFASNGSGECLEGLEFPSTVEDFLLNDPPA
        LAYLL+GKAVFASNGS  CLEGLEFPSTVEDFLLNDPPA
Subjt:  LAYLLLGKAVFASNGSGECLEGLEFPSTVEDFLLNDPPA

XP_022927255.1 uncharacterized protein LOC111434155 [Cucurbita moschata]5.8e-9779.25Show/hide
Query:  PPPAPPGFP--SLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSSRRNPPPLPIETNSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSP
        PPP PP  P  SLHS+FFSSLKQVEKRLKLD+PSQRDA  PPS RR  P LP+E +SSSS EESLS+PMYLHLPQTNT+S+LQESSEPP EFLSNS    
Subjt:  PPPAPPGFP--SLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSSRRNPPPLPIETNSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSP

Query:  LSPPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQKLGAKSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIKYFLNGDGDDGEEERLEP
         S   S+SN PN IDCG+NRPVDDIQ+L+QLLGLGDS +EQ+LGA+SGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWI YF  G    GE ERLEP
Subjt:  LSPPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQKLGAKSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIKYFLNGDGDDGEEERLEP

Query:  LRLAYLLLGKAVFASNGSGECLEGLEFPSTVEDFLLNDPPA
        LRLAYLL+GKAVFASNGS  CLEGLEFPSTVEDFLLNDPPA
Subjt:  LRLAYLLLGKAVFASNGSGECLEGLEFPSTVEDFLLNDPPA

XP_023519908.1 uncharacterized protein LOC111783234 [Cucurbita pepo subsp. pepo]2.9e-9678.24Show/hide
Query:  PPPAPPGFPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSSRRNPPPLPIETNSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS
        PPP PP   SLHS+FFSSLKQVEKRLKLD+PSQRDA  PPS RR  P LP+E +SSSSAEES+S+PMYLHLPQTNT+S+LQESSEPP EFLSNS     S
Subjt:  PPPAPPGFPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSSRRNPPPLPIETNSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS

Query:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQKLGAKSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIKYFLNGDGDDGEEERLEPLR
           S+SN PN IDCG++RPVDDIQ+L+QLLGLGDS +EQ+LGA+SGCNGCEGCESGFYSKIVGLKGPKCGKE ERLNGWI+Y  NG    GE ERLEPLR
Subjt:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQKLGAKSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIKYFLNGDGDDGEEERLEPLR

Query:  LAYLLLGKAVFASNGSGECLEGLEFPSTVEDFLLNDPPA
        LAYLL+GKAVFASNG   CLEGLEFPSTVEDFLLNDPPA
Subjt:  LAYLLLGKAVFASNGSGECLEGLEFPSTVEDFLLNDPPA

XP_038895328.1 uncharacterized protein LOC120083579 [Benincasa hispida]1.1e-9577.18Show/hide
Query:  MQPPPAPPGFPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSSRRNPPPLPIETNSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSP
        MQPP  PP   SLHSNFFSSLKQVEKRLKLDH SQRD  HP      PP  P+ETNSSSS E+SLS+PMYLH PQTNT SALQESSEPPLEFLSNS QSP
Subjt:  MQPPPAPPGFPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSSRRNPPPLPIETNSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSP

Query:  LSPPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQKLGAKSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIKYFLNGDGDDGEEERLEP
         S P S+SN    ID G+N  V DIQ+LIQLLGLG+SCDE +LGAK+GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI++F NG    GEEERLEP
Subjt:  LSPPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQKLGAKSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIKYFLNGDGDDGEEERLEP

Query:  LRLAYLLLGKAVFASNGSGECLEGLEFPSTVEDFLLNDPPA
        LRLAYLL GK+VFASNG   CLEG+EFPSTVEDFLLNDPPA
Subjt:  LRLAYLLLGKAVFASNGSGECLEGLEFPSTVEDFLLNDPPA

TrEMBL top hitse value%identityAlignment
A0A0A0LUG6 Uncharacterized protein2.7e-9578.24Show/hide
Query:  PPPAPPGFPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSSRRNPPPLPIETNSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS
        P PAPP   SLHSNFFSSLKQVEKRLKLDH SQRD  HP      PPPLP+ TNSSS+ E+SLS+PMYLH PQTNTSS LQESS+ PLEFLS+S QSP S
Subjt:  PPPAPPGFPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSSRRNPPPLPIETNSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS

Query:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQKLGAKSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIKYFLNGDGDDGEEERLEPLR
         P S+SN P PID G+NR VDDIQ+LIQLLGL DSCDE++ GAK+GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI++F NG GD  EE+RLEPLR
Subjt:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQKLGAKSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIKYFLNGDGDDGEEERLEPLR

Query:  LAYLLLGKAVFASNGSGECLEGLEFPSTVEDFLLNDPPA
        LAYLLLGKAVFASN    CLEGLEFPSTVEDFLLNDPPA
Subjt:  LAYLLLGKAVFASNGSGECLEGLEFPSTVEDFLLNDPPA

A0A1S3B9V1 uncharacterized protein LOC1034875962.7e-9576.45Show/hide
Query:  MQPPPAPPGFPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSSRRNPPPLPIETNSSSSAEES-LSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQS
        MQPPP PP   SLHS+FFSSLKQVEKRLKLDH SQRD  HP      PPP+P++TN+SSS EE  LS+PMYLH PQTNTSS LQESS+PPLEFLSN   S
Subjt:  MQPPPAPPGFPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSSRRNPPPLPIETNSSSSAEES-LSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQS

Query:  PLSPPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQKLGAKSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIKYFLNGDGDDGEEERLE
        P S P S SN PN ID G+NR +DDIQ+LIQLLGL DSCDE++LG K GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI++F NG    GEE+RLE
Subjt:  PLSPPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQKLGAKSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIKYFLNGDGDDGEEERLE

Query:  PLRLAYLLLGKAVFASNGSGECLEGLEFPSTVEDFLLNDPPA
        PLRLAYLLLGKAVFASNG   CL+GLEFPSTVEDFLLNDPPA
Subjt:  PLRLAYLLLGKAVFASNGSGECLEGLEFPSTVEDFLLNDPPA

A0A5A7UHE6 Uncharacterized protein2.7e-9576.45Show/hide
Query:  MQPPPAPPGFPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSSRRNPPPLPIETNSSSSAEES-LSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQS
        MQPPP PP   SLHS+FFSSLKQVEKRLKLDH SQRD  HP      PPP+P++TN+SSS EE  LS+PMYLH PQTNTSS LQESS+PPLEFLSN   S
Subjt:  MQPPPAPPGFPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSSRRNPPPLPIETNSSSSAEES-LSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQS

Query:  PLSPPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQKLGAKSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIKYFLNGDGDDGEEERLE
        P S P S SN PN ID G+NR +DDIQ+LIQLLGL DSCDE++LG K GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI++F NG    GEE+RLE
Subjt:  PLSPPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQKLGAKSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIKYFLNGDGDDGEEERLE

Query:  PLRLAYLLLGKAVFASNGSGECLEGLEFPSTVEDFLLNDPPA
        PLRLAYLLLGKAVFASNG   CL+GLEFPSTVEDFLLNDPPA
Subjt:  PLRLAYLLLGKAVFASNGSGECLEGLEFPSTVEDFLLNDPPA

A0A6J1END4 uncharacterized protein LOC1114341552.8e-9779.25Show/hide
Query:  PPPAPPGFP--SLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSSRRNPPPLPIETNSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSP
        PPP PP  P  SLHS+FFSSLKQVEKRLKLD+PSQRDA  PPS RR  P LP+E +SSSS EESLS+PMYLHLPQTNT+S+LQESSEPP EFLSNS    
Subjt:  PPPAPPGFP--SLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSSRRNPPPLPIETNSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSP

Query:  LSPPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQKLGAKSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIKYFLNGDGDDGEEERLEP
         S   S+SN PN IDCG+NRPVDDIQ+L+QLLGLGDS +EQ+LGA+SGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWI YF  G    GE ERLEP
Subjt:  LSPPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQKLGAKSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIKYFLNGDGDDGEEERLEP

Query:  LRLAYLLLGKAVFASNGSGECLEGLEFPSTVEDFLLNDPPA
        LRLAYLL+GKAVFASNGS  CLEGLEFPSTVEDFLLNDPPA
Subjt:  LRLAYLLLGKAVFASNGSGECLEGLEFPSTVEDFLLNDPPA

A0A6J1KGL6 uncharacterized protein LOC1114955901.6e-9577.82Show/hide
Query:  PPPAPPGFPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSSRRNPPPLPIETNSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS
        PPP PP   SLHS+FFSSLKQVEKRLKLD+PSQRDA  PPS RR  P LP+E +SSSS EESLS+PMYLHL QTNT+S+LQESSEPP EFLSNS     S
Subjt:  PPPAPPGFPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSSRRNPPPLPIETNSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS

Query:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQKLGAKSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIKYFLNGDGDDGEEERLEPLR
           S+SN PN IDCG+NRPVDDIQ+L+QLLG GDS +E++LGA+SGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWI+YF  G    GE ERLEPLR
Subjt:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQKLGAKSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIKYFLNGDGDDGEEERLEPLR

Query:  LAYLLLGKAVFASNGSGECLEGLEFPSTVEDFLLNDPPA
        LAYLL+GKAVFASNG   CLEGLEFPSTVEDFLLNDPPA
Subjt:  LAYLLLGKAVFASNGSGECLEGLEFPSTVEDFLLNDPPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCCACCTCCGGCGCCGCCGGGGTTTCCATCTCTTCACTCGAATTTCTTTTCGTCTCTTAAACAGGTCGAAAAACGCCTCAAATTAGACCATCCATCGCAACGCGA
CGCTTTTCATCCACCATCATCTCGACGAAATCCACCGCCATTGCCAATAGAAACCAATTCTTCTTCATCAGCCGAAGAGTCACTAAGCTCTCCAATGTATCTGCATTTGC
CCCAAACCAACACAAGCTCTGCCCTACAAGAAAGCAGCGAACCGCCACTCGAATTCCTCTCAAATTCCTTACAATCTCCACTATCCCCTCCGATATCAGACTCGAATCAT
CCGAATCCCATCGATTGTGGCGAAAATCGCCCTGTAGATGACATTCAACAGCTGATTCAACTCCTAGGGTTAGGAGATTCGTGTGACGAACAGAAATTGGGAGCTAAGAG
TGGCTGTAATGGCTGTGAGGGTTGTGAAAGCGGGTTTTACAGTAAGATCGTTGGCTTAAAAGGTCCCAAATGTGGGAAGGAAGTGGAGAGGTTAAATGGATGGATTAAGT
ACTTTTTGAATGGTGACGGTGATGACGGTGAAGAAGAGAGATTAGAGCCTCTTAGACTGGCATATTTGCTGCTGGGGAAAGCTGTTTTTGCTTCTAATGGCAGTGGTGAG
TGTTTGGAAGGATTGGAATTCCCTTCAACCGTAGAGGATTTCTTGCTGAATGATCCTCCTGCATAA
mRNA sequenceShow/hide mRNA sequence
TTTGGCGCCAAATTTTCTTTGGCAGCCGCAGCTTTGCCTCGAGACGTTGCCGCAACTTCATCGGTGAAAAAAAATGCAGCCACCTCCGGCGCCGCCGGGGTTTCCATCTC
TTCACTCGAATTTCTTTTCGTCTCTTAAACAGGTCGAAAAACGCCTCAAATTAGACCATCCATCGCAACGCGACGCTTTTCATCCACCATCATCTCGACGAAATCCACCG
CCATTGCCAATAGAAACCAATTCTTCTTCATCAGCCGAAGAGTCACTAAGCTCTCCAATGTATCTGCATTTGCCCCAAACCAACACAAGCTCTGCCCTACAAGAAAGCAG
CGAACCGCCACTCGAATTCCTCTCAAATTCCTTACAATCTCCACTATCCCCTCCGATATCAGACTCGAATCATCCGAATCCCATCGATTGTGGCGAAAATCGCCCTGTAG
ATGACATTCAACAGCTGATTCAACTCCTAGGGTTAGGAGATTCGTGTGACGAACAGAAATTGGGAGCTAAGAGTGGCTGTAATGGCTGTGAGGGTTGTGAAAGCGGGTTT
TACAGTAAGATCGTTGGCTTAAAAGGTCCCAAATGTGGGAAGGAAGTGGAGAGGTTAAATGGATGGATTAAGTACTTTTTGAATGGTGACGGTGATGACGGTGAAGAAGA
GAGATTAGAGCCTCTTAGACTGGCATATTTGCTGCTGGGGAAAGCTGTTTTTGCTTCTAATGGCAGTGGTGAGTGTTTGGAAGGATTGGAATTCCCTTCAACCGTAGAGG
ATTTCTTGCTGAATGATCCTCCTGCATAATAGGAAAATGGGATGGCATGGCTGAATTTCTGGATTTCAATCTGGACATGAACCAGCAACACTGGAGCTCAAGCAAAATCA
CTTAAAACTATGGTAATGGGTCTCAAATCTTTAACCAAAAGCATGTTAGCTAGTTGCTAAAGCAGAGGAACATGTGATTTTGGTTTGGTCCAAGGGTGGCTCTGTGAAAG
ATTTAATAAATTGAAATCCTCAATATCTCTTGAAGCTAGTAATATCCAAGAGAGAGAAAGAAAATACACACATACATATATATATAGTTTGAATTTAACTGATTAGTGGA
ATTTTTAAGCTGAATAAAAGATGTTCAGAACATTTTGGTGGCCATTTTTGTTAATCCTCTCTTTGTAGGTTGGGATGTATAGAACTCATGACAATTCAAACCAAATCTAA
TC
Protein sequenceShow/hide protein sequence
MQPPPAPPGFPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSSRRNPPPLPIETNSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLSPPISDSNH
PNPIDCGENRPVDDIQQLIQLLGLGDSCDEQKLGAKSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIKYFLNGDGDDGEEERLEPLRLAYLLLGKAVFASNGSGE
CLEGLEFPSTVEDFLLNDPPA