; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016202 (gene) of Snake gourd v1 genome

Gene IDTan0016202
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationLG07:72138092..72139091
RNA-Seq ExpressionTan0016202
SyntenyTan0016202
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146384.1 putative CCR4-associated factor 1 homolog 8 [Momordica charantia]4.5e-11071.03Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDSF
        R+VWS NL EELELL EYLPEFP+V ID EFPGFL  TPKG+ E+EFY CLRFNVNRL+ILQ GLTL + KGNI MTWEFNF+DFD +SDM  VSSLDSF
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDSF

Query:  LKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGLKKLA
        LKNKGFDF KL+K GIA E FTTLFLPICRS QI RWITFHGFYDI YL+KLL IK +  SM  FATTAQ LLGT+ DLKHMARYC+GLL+G+LGLKKLA
Subjt:  LKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGLKKLA

Query:  KLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSHRRVVNIVDPSVVTSSP--LSKCSLLSCNRSSSVFVSL
        KLLDVKRI  AHFA SD+L T SVY KMK +FKLP EQCEGFLYGLP+ I   + V  I+DPS +T  P   SK S+LS   S+ + V +
Subjt:  KLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSHRRVVNIVDPSVVTSSP--LSKCSLLSCNRSSSVFVSL

XP_022154798.1 probable CCR4-associated factor 1 homolog 6 [Momordica charantia]7.9e-11568.04Show/hide
Query:  MLKTTKKVVITPS--NRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEF-----------------------------PGFLRYTPKGVPEKEFYECLRF
        M KT  K    P   ++ R+VWS+NLH+ELE+L EYLPEFPIVAIDTEF                             PGFLRYTPKGV E+EFY+CLRF
Subjt:  MLKTTKKVVITPS--NRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEF-----------------------------PGFLRYTPKGVPEKEFYECLRF

Query:  NVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLL
        NVNRL+ILQ GLTL N  GN+ MTWEFNF+DFD ISDM GVSSLDSFLKNKGFDF KL++DGIA E FTTLFLPICRS +I+RWITFHGFYDIAYL+KLL
Subjt:  NVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLL

Query:  GIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSH
         IK++  SM  FA TAQ LLGT+ DLKHM RYC+GLL+GDLGLKKLAKLLDVKRIG AHFAGSDSLLTA+VY KMK MFK+P EQ EGFLYGLPHRI++ 
Subjt:  GIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSH

Query:  RRVVNIVDPSVVTSSP
        + +V IVDPS +T  P
Subjt:  RRVVNIVDPSVVTSSP

XP_022963784.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]3.1e-10368.99Show/hide
Query:  MLKTTKKVVITPSNRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKD
        M K   +V I     KRDVWSHNL EE+EL+K+ L EFPIVAIDTEFPGFLR+TPKGV ++EFYECL+FNVNRLSILQ GLTL ND G IGMTWEFNF+D
Subjt:  MLKTTKKVVITPSNRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKD

Query:  FDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMAR
        FDKIS+M GV SLDSFLKNKGF+F  LR  GIAPE+F T F PI RS +I RWITFHG YDIAYLMK   I+ M TSM +FA TA  +LGT+ DLKHMA 
Subjt:  FDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMAR

Query:  YCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSHRRVVNIVDPSVVTSSPLS
        Y   LL+G+LGLKKLAKLL V R GTAHFAGSDSLLTASVY KMK++ K+ P   EGFLYGLP+ I+ +RR V IVDPS +T   +S
Subjt:  YCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSHRRVVNIVDPSVVTSSPLS

XP_023511526.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]1.5e-10568.29Show/hide
Query:  MLKTTKKVVITPSNRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKD
        M K  ++V I     KRDVWSHNL EE+EL+K+ L EFPIVAIDTEFPGFLR+TPKGV ++EFYECL+FNVNRLSILQ GLTL ND G IGMTWEFNF+D
Subjt:  MLKTTKKVVITPSNRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKD

Query:  FDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMAR
        FDKIS+M GV SLDSFLKNKGF+F  LR  GIAP++F   F PI RS +I RWITFHG YDIAYLMK   I+ M TSM MFA +A  +LGT+ DLKHMAR
Subjt:  FDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMAR

Query:  YCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSHRRVVNIVDPSVVTSSPLS
        Y N LLNG+LGLK+LAKLL V R GTAHFAGSDSLLTA+VY KMK++ K+ P++ EGFLYGLP+ I+ +RR + IVDPS +T   +S
Subjt:  YCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSHRRVVNIVDPSVVTSSPLS

XP_023550519.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]6.3e-10470.96Show/hide
Query:  KRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDS
        KR+VWS+NL EE+EL+K YL EFPIVA+DTEFPGFLR+TPKGV ++EFY+CL+FNVNRLSILQ GLTLI++ G IGMTWEFNFKDFDKIS+M GV SLDS
Subjt:  KRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDS

Query:  FLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGLKKL
        FLKNKGF+F KLR  GIAPE+F+  F P+ RSR+I RWITFHG YDIAYLMK   I  M TSM MFA  A  LLGT+ DLKHMARY + L NG+LGLKKL
Subjt:  FLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGLKKL

Query:  AKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSHRRVVNIVDPSVVTSSPLS
        AKLL + RIGTAHFAGSDSLLTASVY KMK + K+ P+  EGFLYGLP+ I+ +RR V IVDPS +T   +S
Subjt:  AKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSHRRVVNIVDPSVVTSSPLS

TrEMBL top hitse value%identityAlignment
A0A6J1CXZ5 Poly(A)-specific ribonuclease2.2e-11071.03Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDSF
        R+VWS NL EELELL EYLPEFP+V ID EFPGFL  TPKG+ E+EFY CLRFNVNRL+ILQ GLTL + KGNI MTWEFNF+DFD +SDM  VSSLDSF
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDSF

Query:  LKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGLKKLA
        LKNKGFDF KL+K GIA E FTTLFLPICRS QI RWITFHGFYDI YL+KLL IK +  SM  FATTAQ LLGT+ DLKHMARYC+GLL+G+LGLKKLA
Subjt:  LKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGLKKLA

Query:  KLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSHRRVVNIVDPSVVTSSP--LSKCSLLSCNRSSSVFVSL
        KLLDVKRI  AHFA SD+L T SVY KMK +FKLP EQCEGFLYGLP+ I   + V  I+DPS +T  P   SK S+LS   S+ + V +
Subjt:  KLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSHRRVVNIVDPSVVTSSP--LSKCSLLSCNRSSSVFVSL

A0A6J1DLA5 Poly(A)-specific ribonuclease3.8e-11568.04Show/hide
Query:  MLKTTKKVVITPS--NRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEF-----------------------------PGFLRYTPKGVPEKEFYECLRF
        M KT  K    P   ++ R+VWS+NLH+ELE+L EYLPEFPIVAIDTEF                             PGFLRYTPKGV E+EFY+CLRF
Subjt:  MLKTTKKVVITPS--NRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEF-----------------------------PGFLRYTPKGVPEKEFYECLRF

Query:  NVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLL
        NVNRL+ILQ GLTL N  GN+ MTWEFNF+DFD ISDM GVSSLDSFLKNKGFDF KL++DGIA E FTTLFLPICRS +I+RWITFHGFYDIAYL+KLL
Subjt:  NVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLL

Query:  GIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSH
         IK++  SM  FA TAQ LLGT+ DLKHM RYC+GLL+GDLGLKKLAKLLDVKRIG AHFAGSDSLLTA+VY KMK MFK+P EQ EGFLYGLPHRI++ 
Subjt:  GIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSH

Query:  RRVVNIVDPSVVTSSP
        + +V IVDPS +T  P
Subjt:  RRVVNIVDPSVVTSSP

A0A6J1ESM7 Poly(A)-specific ribonuclease1.7e-10266.55Show/hide
Query:  MLKTTKKVVITPSNRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKD
        M K  +   I     KR+VWSHNL EE+EL+K YL EFPIVAIDTEFPGFLR+TPKGV ++EFY+CL+FNVNRLSILQ GLTL +D G IGMTWEFNF+D
Subjt:  MLKTTKKVVITPSNRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKD

Query:  FDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMAR
        FD+IS+M GV SLDSFLKNKGF+F KLR  GIAP++F+  F P+ RS +I +WITFHG YDIAYLMK   I  M TSM MFA  A  LLGT+ DLKHMAR
Subjt:  FDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMAR

Query:  YCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSHRRVVNIVDPSVVTSSPLS
        Y + L NG+LGLKKLAKLL + R+GTAHFAGSDSLLTASVY KMK++ K+ P+  EGFLYGLP+ I+ +R  V IVDPS +T   +S
Subjt:  YCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSHRRVVNIVDPSVVTSSPLS

A0A6J1HIZ7 Poly(A)-specific ribonuclease3.7e-10270.96Show/hide
Query:  KRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDS
        +RDVWSHNL EE+EL+++ L EFPIVA+DTEFPGFLR+TPKGV ++EFYECL+FNVNRLSILQ GLTL ND G IGMTWEFNFKDFDKIS+M GV SLDS
Subjt:  KRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDS

Query:  FLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGLKKL
        FLKNKGF+F  LR  GIAPE+F   F PI RS +I RWITFHG YDIAYLMKL  I  M TSM +FA TA  LLGT+ DLKHMAR  N L NG+LGLKKL
Subjt:  FLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGLKKL

Query:  AKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSHRRVVNIVDPSVVTSSPLS
        AKLL V R GTAHFAGSDSLLTASVY KMK++ K+  +  EGFLYGLP+ I+ +RR V IVDPS +T   +S
Subjt:  AKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSHRRVVNIVDPSVVTSSPLS

A0A6J1HL76 Poly(A)-specific ribonuclease1.5e-10368.99Show/hide
Query:  MLKTTKKVVITPSNRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKD
        M K   +V I     KRDVWSHNL EE+EL+K+ L EFPIVAIDTEFPGFLR+TPKGV ++EFYECL+FNVNRLSILQ GLTL ND G IGMTWEFNF+D
Subjt:  MLKTTKKVVITPSNRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKD

Query:  FDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMAR
        FDKIS+M GV SLDSFLKNKGF+F  LR  GIAPE+F T F PI RS +I RWITFHG YDIAYLMK   I+ M TSM +FA TA  +LGT+ DLKHMA 
Subjt:  FDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMAR

Query:  YCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSHRRVVNIVDPSVVTSSPLS
        Y   LL+G+LGLKKLAKLL V R GTAHFAGSDSLLTASVY KMK++ K+ P   EGFLYGLP+ I+ +RR V IVDPS +T   +S
Subjt:  YCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSHRRVVNIVDPSVVTSSPLS

SwissProt top hitse value%identityAlignment
Q9LXM2 Probable CCR4-associated factor 1 homolog 97.4e-3937.08Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGF-----LRYTPKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNI---------GMTWEFNFKDFD
        R+VW+ NL  E EL+ E + ++P +++DTEFPG      LR+T       + Y  L+ NV+ LS++Q GLTL +  GN+         G  WEFNF+DFD
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGF-----LRYTPKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNI---------GMTWEFNFKDFD

Query:  KISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP---ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMV-DLKHM
           D     S++  L+ +G DF +  +DG+  E+F  L +    +C       W+TFH  YD  YLMK+L  + +  ++  F    + L G  V D+KHM
Subjt:  KISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP---ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMV-DLKHM

Query:  ARYCNGLLNGDLGLKKLAKLLDVKR-IGTAHFAGSDSLLTASVYVKMKMMFKLP--PEQCEGFLYGL
         ++C   L G  GL ++A+ L+V R +G  H AGSDSLLT   + +M+ ++ +   PE+  G LYGL
Subjt:  ARYCNGLLNGDLGLKKLAKLLDVKR-IGTAHFAGSDSLLTASVYVKMKMMFKLP--PEQCEGFLYGL

Q9S9P2 Probable CCR4-associated factor 1 homolog 23.0e-4036.36Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYT--------PKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNI-------GMTWEFNFKDF
        R+VW+HNL +E+ L+++ + +FP VA+DTEFPG +  T        P  +  +  Y+ L+ NVN L ++Q GLTL ++KGN+          W+FNF++F
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYT--------PKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNI-------GMTWEFNFKDF

Query:  DKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFL--PICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMA
        + ISDM  + S++  L+    D  K  + G+  ++F  L +   +  + +I  W+TFH  YD  YL+KLL  K +   +  F    ++    + D+K++ 
Subjt:  DKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFL--PICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMA

Query:  RYCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMK-MMFKLPPEQCEGFLYGL
         +C  L     GL+K+A+LL VKR+G +H AGSDSLLT   ++KMK   F     +  GFL+GL
Subjt:  RYCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMK-MMFKLPPEQCEGFLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 66.4e-4339.38Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKE---FYECLRFNVNRLSILQFGLTLINDKGNIG-------MTWEFNFKDFDKISD
        R+VW+ NL EE++L+++ + +FP VA+DTEFPG +   P G  +      YE L+ NVN L ++Q GLT  N++GN+          W+FNF++FD  SD
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKE---FYECLRFNVNRLSILQFGLTLINDKGNIG-------MTWEFNFKDFDKISD

Query:  MVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNG
        +  + S++  LK  G D  K   DGI  ++F  L +   I  +  +  W+TFH  YD  YL+KLL  + +  S   F         T+ D+KH+ ++CN 
Subjt:  MVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNG

Query:  LLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPP-EQCEGFLYGL
        L     GL KLA+LL+V+R+G  H AGSDSLLT+  + K+K  F + P  +  G LYGL
Subjt:  LLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPP-EQCEGFLYGL

Q9SHJ0 Probable CCR4-associated factor 1 homolog 13.9e-4038Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDSF
        R VW  N+ EE+  + E L  FP++A DTE+PG +  T       E Y  ++ NV    ++Q G TL N KG IG  WE NF +F   SD     S++ F
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDSF

Query:  LKNKGFDFVKLRKDGIAPEKFTTLFLP----ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGL
        L+  G D  K+R +G+  + F   F P    + RS++   ++TF G YD AY + +L    +  +   FAT   ++ G + D K MA +C G L   LGL
Subjt:  LKNKGFDFVKLRKDGIAPEKFTTLFLP----ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGL

Query:  KKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGL
         KLA+LL + R+G AH AGSDSL+TA V++K+K +++       G +YG+
Subjt:  KKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGL

Q9SKZ2 Probable CCR4-associated factor 1 homolog 77.9e-4138.46Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKG---VPEKEFYECLRFNVNRLSILQFGLTLINDKGNIG--------MTWEFNFKDFDKIS
        R+VW+ NL  E+ L++E + +FP VA+DTEFPG +   P G      +  YE L+ NVN L ++Q GLT  ++KGN+           W+FNF++FD  S
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKG---VPEKEFYECLRFNVNRLSILQFGLTLINDKGNIG--------MTWEFNFKDFDKIS

Query:  DMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCN
        D+    S++  L+  G DFVK  + GI  ++F  L +   I  +  +  W+TFH  YD  YL+KLL  + +  +   F          + D+KH+ ++CN
Subjt:  DMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCN

Query:  GLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKL-PPEQCEGFLYGL
         L     GL KLA+LLDV+R+G  H AGSDSLLT+  + K++  F +   E+  G LYGL
Subjt:  GLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKL-PPEQCEGFLYGL

Arabidopsis top hitse value%identityAlignment
AT1G15920.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.1e-4136.36Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYT--------PKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNI-------GMTWEFNFKDF
        R+VW+HNL +E+ L+++ + +FP VA+DTEFPG +  T        P  +  +  Y+ L+ NVN L ++Q GLTL ++KGN+          W+FNF++F
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYT--------PKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNI-------GMTWEFNFKDF

Query:  DKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFL--PICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMA
        + ISDM  + S++  L+    D  K  + G+  ++F  L +   +  + +I  W+TFH  YD  YL+KLL  K +   +  F    ++    + D+K++ 
Subjt:  DKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFL--PICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMA

Query:  RYCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMK-MMFKLPPEQCEGFLYGL
         +C  L     GL+K+A+LL VKR+G +H AGSDSLLT   ++KMK   F     +  GFL+GL
Subjt:  RYCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMK-MMFKLPPEQCEGFLYGL

AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.6e-4439.38Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKE---FYECLRFNVNRLSILQFGLTLINDKGNIG-------MTWEFNFKDFDKISD
        R+VW+ NL EE++L+++ + +FP VA+DTEFPG +   P G  +      YE L+ NVN L ++Q GLT  N++GN+          W+FNF++FD  SD
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKE---FYECLRFNVNRLSILQFGLTLINDKGNIG-------MTWEFNFKDFDKISD

Query:  MVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNG
        +  + S++  LK  G D  K   DGI  ++F  L +   I  +  +  W+TFH  YD  YL+KLL  + +  S   F         T+ D+KH+ ++CN 
Subjt:  MVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNG

Query:  LLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPP-EQCEGFLYGL
        L     GL KLA+LL+V+R+G  H AGSDSLLT+  + K+K  F + P  +  G LYGL
Subjt:  LLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPP-EQCEGFLYGL

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.6e-4439.38Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKE---FYECLRFNVNRLSILQFGLTLINDKGNIG-------MTWEFNFKDFDKISD
        R+VW+ NL EE++L+++ + +FP VA+DTEFPG +   P G  +      YE L+ NVN L ++Q GLT  N++GN+          W+FNF++FD  SD
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKE---FYECLRFNVNRLSILQFGLTLINDKGNIG-------MTWEFNFKDFDKISD

Query:  MVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNG
        +  + S++  LK  G D  K   DGI  ++F  L +   I  +  +  W+TFH  YD  YL+KLL  + +  S   F         T+ D+KH+ ++CN 
Subjt:  MVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNG

Query:  LLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPP-EQCEGFLYGL
        L     GL KLA+LL+V+R+G  H AGSDSLLT+  + K+K  F + P  +  G LYGL
Subjt:  LLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPP-EQCEGFLYGL

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.6e-4439.38Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKE---FYECLRFNVNRLSILQFGLTLINDKGNIG-------MTWEFNFKDFDKISD
        R+VW+ NL EE++L+++ + +FP VA+DTEFPG +   P G  +      YE L+ NVN L ++Q GLT  N++GN+          W+FNF++FD  SD
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKE---FYECLRFNVNRLSILQFGLTLINDKGNIG-------MTWEFNFKDFDKISD

Query:  MVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNG
        +  + S++  LK  G D  K   DGI  ++F  L +   I  +  +  W+TFH  YD  YL+KLL  + +  S   F         T+ D+KH+ ++CN 
Subjt:  MVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNG

Query:  LLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPP-EQCEGFLYGL
        L     GL KLA+LL+V+R+G  H AGSDSLLT+  + K+K  F + P  +  G LYGL
Subjt:  LLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPP-EQCEGFLYGL

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.6e-4238.46Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKG---VPEKEFYECLRFNVNRLSILQFGLTLINDKGNIG--------MTWEFNFKDFDKIS
        R+VW+ NL  E+ L++E + +FP VA+DTEFPG +   P G      +  YE L+ NVN L ++Q GLT  ++KGN+           W+FNF++FD  S
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKG---VPEKEFYECLRFNVNRLSILQFGLTLINDKGNIG--------MTWEFNFKDFDKIS

Query:  DMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCN
        D+    S++  L+  G DFVK  + GI  ++F  L +   I  +  +  W+TFH  YD  YL+KLL  + +  +   F          + D+KH+ ++CN
Subjt:  DMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCN

Query:  GLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKL-PPEQCEGFLYGL
         L     GL KLA+LLDV+R+G  H AGSDSLLT+  + K++  F +   E+  G LYGL
Subjt:  GLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKL-PPEQCEGFLYGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAAGACCACCAAAAAAGTTGTGATCACTCCAAGTAATAGAAAACGAGACGTTTGGTCCCACAACCTCCATGAAGAATTAGAGCTTTTGAAAGAGTATCTCCCAGA
ATTTCCGATAGTTGCCATTGATACAGAATTTCCAGGATTTCTGCGATACACTCCAAAGGGTGTTCCCGAGAAAGAATTTTATGAGTGCCTTCGATTCAATGTGAATCGAT
TAAGTATACTCCAATTTGGTCTCACACTCATCAATGACAAAGGAAACATCGGAATGACTTGGGAGTTTAACTTTAAAGATTTCGATAAAATTTCTGACATGGTAGGAGTT
TCTTCACTCGATTCGTTTCTCAAAAACAAGGGATTCGATTTTGTCAAATTGAGAAAAGATGGAATCGCGCCAGAGAAGTTCACCACCTTGTTTCTTCCAATCTGTCGCAG
CCGCCAAATCGATAGATGGATCACCTTCCATGGATTTTACGACATTGCTTATCTGATGAAGCTTCTAGGAATCAAATTCATGGCGACCTCCATGGTGATGTTTGCAACCA
CCGCTCAGCAATTGTTGGGAACCATGGTCGATCTCAAACACATGGCTCGCTACTGCAATGGCTTGCTTAATGGCGACTTGGGGCTAAAAAAACTAGCCAAATTGCTCGAC
GTCAAACGAATCGGTACAGCCCATTTTGCTGGTTCTGATAGTTTACTCACAGCTTCTGTTTATGTGAAGATGAAGATGATGTTCAAGCTCCCTCCAGAACAGTGTGAAGG
ATTTTTGTACGGATTGCCTCACCGAATTCGATCCCACCGACGAGTTGTGAACATTGTTGATCCATCTGTAGTGACTTCATCACCATTGTCGAAATGTTCGTTGTTGTCTT
GTAATAGATCGTCGTCAGTGTTCGTTTCGCTAGTTGAGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGAAGACCACCAAAAAAGTTGTGATCACTCCAAGTAATAGAAAACGAGACGTTTGGTCCCACAACCTCCATGAAGAATTAGAGCTTTTGAAAGAGTATCTCCCAGA
ATTTCCGATAGTTGCCATTGATACAGAATTTCCAGGATTTCTGCGATACACTCCAAAGGGTGTTCCCGAGAAAGAATTTTATGAGTGCCTTCGATTCAATGTGAATCGAT
TAAGTATACTCCAATTTGGTCTCACACTCATCAATGACAAAGGAAACATCGGAATGACTTGGGAGTTTAACTTTAAAGATTTCGATAAAATTTCTGACATGGTAGGAGTT
TCTTCACTCGATTCGTTTCTCAAAAACAAGGGATTCGATTTTGTCAAATTGAGAAAAGATGGAATCGCGCCAGAGAAGTTCACCACCTTGTTTCTTCCAATCTGTCGCAG
CCGCCAAATCGATAGATGGATCACCTTCCATGGATTTTACGACATTGCTTATCTGATGAAGCTTCTAGGAATCAAATTCATGGCGACCTCCATGGTGATGTTTGCAACCA
CCGCTCAGCAATTGTTGGGAACCATGGTCGATCTCAAACACATGGCTCGCTACTGCAATGGCTTGCTTAATGGCGACTTGGGGCTAAAAAAACTAGCCAAATTGCTCGAC
GTCAAACGAATCGGTACAGCCCATTTTGCTGGTTCTGATAGTTTACTCACAGCTTCTGTTTATGTGAAGATGAAGATGATGTTCAAGCTCCCTCCAGAACAGTGTGAAGG
ATTTTTGTACGGATTGCCTCACCGAATTCGATCCCACCGACGAGTTGTGAACATTGTTGATCCATCTGTAGTGACTTCATCACCATTGTCGAAATGTTCGTTGTTGTCTT
GTAATAGATCGTCGTCAGTGTTCGTTTCGCTAGTTGAGACTTGA
Protein sequenceShow/hide protein sequence
MLKTTKKVVITPSNRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVPEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGV
SSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMVMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGLKKLAKLLD
VKRIGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSHRRVVNIVDPSVVTSSPLSKCSLLSCNRSSSVFVSLVET