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Tan0016204 (gene) of Snake gourd v1 genome

Gene IDTan0016204
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionActin-related protein 2/3 complex subunit 5
Genome locationLG03:65237416..65242512
RNA-Seq ExpressionTan0016204
SyntenyTan0016204
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR006789 - Actin-related protein 2/3 complex subunit 5
IPR036743 - Actin-related protein 2/3 complex subunit 5 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056599.1 actin-related protein 2/3 complex subunit 5A [Cucumis melo var. makuwa]2.8e-3998.84Show/hide
Query:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
        EFVEADNAEAIITRIEHKSRKIESLLKQSKP+EALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
Subjt:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
XP_008441367.1 PREDICTED: actin-related protein 2/3 complex subunit 5A [Cucumis melo]2.8e-3998.84Show/hide
Query:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
        EFVEADNAEAIITRIEHKSRKIESLLKQSKP+EALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
Subjt:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
XP_010089302.1 actin-related protein 2/3 complex subunit 5A [Morus notabilis]2.8e-3997.7Show/hide
Query:  DEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
        D FVEADNAEAIITRIEHKSRKIESLLKQSKP+EALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
Subjt:  DEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
XP_022989957.1 actin-related protein 2/3 complex subunit 5A isoform X1 [Cucurbita maxima]1.7e-3993.48Show/hide
Query:  MADEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKTSR
        M+D FVEADNAEAIITRIEHKSRKIESLLKQSK +EALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILM T R
Subjt:  MADEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKTSR
XP_022989961.1 actin-related protein 2/3 complex subunit 5A isoform X2 [Cucurbita maxima]4.8e-3995.51Show/hide
Query:  MADEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
        M+D FVEADNAEAIITRIEHKSRKIESLLKQSK +EALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
Subjt:  MADEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
TrEMBL top hitse value%identityAlignment
A0A1S3B407 Actin-related protein 2/3 complex subunit 51.4e-3998.84Show/hide
Query:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
        EFVEADNAEAIITRIEHKSRKIESLLKQSKP+EALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
Subjt:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
A0A5A7USU9 Actin-related protein 2/3 complex subunit 51.4e-3998.84Show/hide
Query:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
        EFVEADNAEAIITRIEHKSRKIESLLKQSKP+EALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
Subjt:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
A0A6J1JH92 Actin-related protein 2/3 complex subunit 58.1e-4093.48Show/hide
Query:  MADEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKTSR
        M+D FVEADNAEAIITRIEHKSRKIESLLKQSK +EALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILM T R
Subjt:  MADEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKTSR
A0A6J1JLM3 Actin-related protein 2/3 complex subunit 52.3e-3995.51Show/hide
Query:  MADEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
        M+D FVEADNAEAIITRIEHKSRKIESLLKQSK +EALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
Subjt:  MADEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
W9R3V7 Actin-related protein 2/3 complex subunit 51.4e-3997.7Show/hide
Query:  DEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
        D FVEADNAEAIITRIEHKSRKIESLLKQSKP+EALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
Subjt:  DEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
SwissProt top hitse value%identityAlignment
B3H6Y2 Actin-related protein 2/3 complex subunit 5B8.6e-3176.14Show/hide
Query:  ADEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
        A  FVEADNAE I+ RIE KS+KIESLLK  K +EALKTAL+GSPP T DERCKSANWIVVHRA+MAIKD++GM +SL  EYYDILMK
Subjt:  ADEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
Q9M117 Actin-related protein 2/3 complex subunit 5A2.0e-3587.21Show/hide
Query:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
        EFVEADNAEAII RIE KSRKIESLLKQ K +EALKTALEGSPP TRDERCKSANWIVVHRALMAIKD+DGM ++LD EYYDILMK
Subjt:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
Arabidopsis top hitse value%identityAlignment
AT4G01710.1 ARP2/3 complex 16 kDa subunit (p16-Arc)1.4e-3687.21Show/hide
Query:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
        EFVEADNAEAII RIE KSRKIESLLKQ K +EALKTALEGSPP TRDERCKSANWIVVHRALMAIKD+DGM ++LD EYYDILMK
Subjt:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
AT5G65274.1 ARP2/3 complex 16 kDa subunit (p16-Arc)6.1e-3276.14Show/hide
Query:  ADEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK
        A  FVEADNAE I+ RIE KS+KIESLLK  K +EALKTAL+GSPP T DERCKSANWIVVHRA+MAIKD++GM +SL  EYYDILMK
Subjt:  ADEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATGAATTTGTGGAAGCAGACAATGCTGAAGCCATAATCACTAGAATTGAGCACAAATCTCGGAAGATCGAGAGCTTACTTAAACAATCTAAGCCAATCGAAGC
TCTAAAAACTGCTCTCGAAGGTTCGCCTCCAAATACTCGAGATGAGCGCTGCAAGTCAGCAAATTGGATTGTGGTGCATAGGGCTCTTATGGCTATAAAGGATGTAGATG
GGATGTTTTCTTCGTTGGATCCGGAGTACTATGATATTCTAATGAAGACTTCTCGAGGGCAACTTGGAAAACAGTTTATGATCTCTTCAACGTCTTCCCTTTTTTTACCC
TTCGCCTCAAAGGTACTTGTACAAAGGCTTGTCAACTGGTGA
mRNA sequenceShow/hide mRNA sequence
GCCTTCCAAATTCAGGGTTTTCAAACAGAGGCGAAGTTCGAGGAAATCTTACTGAAGGTTGGGGATAGGCGAAAATGGCAGATGAATTTGTGGAAGCAGACAATGCTGAA
GCCATAATCACTAGAATTGAGCACAAATCTCGGAAGATCGAGAGCTTACTTAAACAATCTAAGCCAATCGAAGCTCTAAAAACTGCTCTCGAAGGTTCGCCTCCAAATAC
TCGAGATGAGCGCTGCAAGTCAGCAAATTGGATTGTGGTGCATAGGGCTCTTATGGCTATAAAGGATGTAGATGGGATGTTTTCTTCGTTGGATCCGGAGTACTATGATA
TTCTAATGAAGACTTCTCGAGGGCAACTTGGAAAACAGTTTATGATCTCTTCAACGTCTTCCCTTTTTTTACCCTTCGCCTCAAAGGTACTTGTACAAAGGCTTGTCAAC
TGGTGACCGTCCCACATGTGATCAGTGTCTCAGGATACATGAAAAATTGATGAGAAAAGGGTTGGCTTAAATTTTGCATTCTCCGTTCCCTTGCAGATACTATCAACACA
GTTTGATTTTGCTTAACTTGATAGATAGAACATTATGAGCATTCCCGAGCTCTTTGGTTGATGTTGGAAATCATGTTATTTTCTCTCGGATGTATGTGAAATTGCATTTC
AGAGCGTGTTTTGTGTTAAGCTGAATAGCCTTCTATATATGATACATGATATAAGAAAAGCACAAGTACTAAATATCATTCAATCGAGGATATTTTGAATTAT
Protein sequenceShow/hide protein sequence
MADEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKTSRGQLGKQFMISSTSSLFLP
FASKVLVQRLVNW