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Tan0016216 (gene) of Snake gourd v1 genome

Gene IDTan0016216
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:98339153..98340090
RNA-Seq ExpressionTan0016216
SyntenyTan0016216
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5457733.1 hypothetical protein F2P56_021813, partial [Juglans regia]1.9e-0442.11Show/hide
Query:  MVDSFILKLATEAASSTLFIFCFFNFIILIILFSSFHHQNDDDY--DVPLSI-VIDSNTNTQQNFMLHKNVT-VQLTKTLNEPDKCMSFNCSD---NNFK
        M DS IL   T+A SS++FIFCF N II+IIL  S    N DD   ++P S+ +ID++TN +      +  +  +L++ +NE  +    + +D   NN K
Subjt:  MVDSFILKLATEAASSTLFIFCFFNFIILIILFSSFHHQNDDDY--DVPLSI-VIDSNTNTQQNFMLHKNVT-VQLTKTLNEPDKCMSFNCSD---NNFK

Query:  ESDDDHENEDEDEDEEDFRRRVEDFIE---KGW
        E  DDH   D+ EDEE  RR+VE+FIE   KGW
Subjt:  ESDDDHENEDEDEDEEDFRRRVEDFIE---KGW

KAF5480291.1 hypothetical protein F2P56_001053, partial [Juglans regia]3.0e-0539.39Show/hide
Query:  MVDSFILKLATEAASSTLFIFCFFNFIILIILFSSFHHQN-DDDYDVPLSIVIDSNTNTQQNFMLHKNVT-VQLTKTLNEPDKCMSFNCSDNNFKESDD-
        M DS +L+L + AAS++LFIFCFFN II +IL  S    N D + ++P+S++I+++T  +Q     +     + ++  NE    +     D + +E D+ 
Subjt:  MVDSFILKLATEAASSTLFIFCFFNFIILIILFSSFHHQN-DDDYDVPLSIVIDSNTNTQQNFMLHKNVT-VQLTKTLNEPDKCMSFNCSDNNFKESDD-

Query:  DHENEDEDEDEED---FRRRVEDFIE---KGW
        DH+N+D D+D ED    RRRVE+FIE   KGW
Subjt:  DHENEDEDEDEED---FRRRVEDFIE---KGW

KAG6605668.1 hypothetical protein SDJN03_02985, partial [Cucurbita argyrosperma subsp. sororia]4.6e-2261.15Show/hide
Query:  MVDSFILKLATEAASSTLFIFCFFNFIILIILF------SSFHHQNDDDYDVPLSIVIDSNTNTQQNFMLHKNVTVQ---LTKTLNEPDKCMSFNCSDNN
        M DS IL+LA EAASSTLFIFC FN I+LIILF      SS  HQN D  DVPLSIVI SNTN QQNFML KN  V    +T+TLNEPD         ++
Subjt:  MVDSFILKLATEAASSTLFIFCFFNFIILIILF------SSFHHQNDDDYDVPLSIVIDSNTNTQQNFMLHKNVTVQ---LTKTLNEPDKCMSFNCSDNN

Query:  FKESDDDHENEDED----EDEEDFRRRVEDFIEK---GW
         + S DDHE+EDED    EDEEDF+RRVE+FIEK   GW
Subjt:  FKESDDDHENEDED----EDEEDFRRRVEDFIEK---GW

XP_024928006.1 uncharacterized protein LOC112491100 [Ziziphus jujuba]1.1e-0439.5Show/hide
Query:  LATEAASSTLFIFCFFNFIILIILFSSFHHQN-DDDYDVPLSIVIDSNTNTQQNFMLHKNVTVQLTKTLNEPDKCMSFNCSDNNFKESDDDHENEDEDED
        L T+ AS++LF+FCF N II+IIL  S    N D +  +PLS+    +T+ +Q  +  K V  ++ +  N      + N   N   E+++D E E+ED+D
Subjt:  LATEAASSTLFIFCFFNFIILIILFSSFHHQN-DDDYDVPLSIVIDSNTNTQQNFMLHKNVTVQLTKTLNEPDKCMSFNCSDNNFKESDDDHENEDEDED

Query:  EEDFRRRVEDFIEK---GW
        E   RRRVE+FIEK   GW
Subjt:  EEDFRRRVEDFIEK---GW

XP_031742158.1 probable ATP-dependent RNA helicase ddx52 [Cucumis sativus]1.9e-2056.52Show/hide
Query:  MVDSFILKLATEAASSTLFIFCFFNFIILIILF------SSFHHQNDDDYDVPLSIVIDSNTN-TQQNFMLHKNVTV---QLTKTLNEPDKCMSFNCSDN
        M DS IL+LA +A SSTLFIFCFFN IIL+I F      SSF  QNDD+ D+PLSIVI S TN T+QN ML K+  V   ++ ++ NE ++C++FNC + 
Subjt:  MVDSFILKLATEAASSTLFIFCFFNFIILIILF------SSFHHQNDDDYDVPLSIVIDSNTN-TQQNFMLHKNVTV---QLTKTLNEPDKCMSFNCSDN

Query:  NFKESDDDHEN--EDEDEDEEDFRRRVEDFIEK---GW
        + ++SDDD+E+  EDEDEDE+DFR+RVE+FIEK   GW
Subjt:  NFKESDDDHEN--EDEDEDEEDFRRRVEDFIEK---GW

TrEMBL top hitse value%identityAlignment
A0A2N9GM45 Uncharacterized protein1.1e-0540.44Show/hide
Query:  MVDSFILKLATEAASSTLFIFCFFNFIILIILFSSFHHQNDDDY----DVPLSIVIDSNTNTQQNFMLHKNVT-----VQLTKTLNEPDK-CMSFNCSDN
        M DS +L+L T+AAS++LFIFCF N II I+L +S   ++  D+    ++PLS+VI+++TN       HK+VT         K L   D+   S      
Subjt:  MVDSFILKLATEAASSTLFIFCFFNFIILIILFSSFHHQNDDDY----DVPLSIVIDSNTNTQQNFMLHKNVT-----VQLTKTLNEPDK-CMSFNCSDN

Query:  NFKESDDDHENEDEDEDEEDFRRRVEDFIE---KGW
        + +ES +++  +DEDED+++ RRRVE+FIE   KGW
Subjt:  NFKESDDDHENEDEDEDEEDFRRRVEDFIE---KGW

A0A6P6G1P3 uncharacterized protein LOC1124911005.5e-0539.5Show/hide
Query:  LATEAASSTLFIFCFFNFIILIILFSSFHHQN-DDDYDVPLSIVIDSNTNTQQNFMLHKNVTVQLTKTLNEPDKCMSFNCSDNNFKESDDDHENEDEDED
        L T+ AS++LF+FCF N II+IIL  S    N D +  +PLS+    +T+ +Q  +  K V  ++ +  N      + N   N   E+++D E E+ED+D
Subjt:  LATEAASSTLFIFCFFNFIILIILFSSFHHQN-DDDYDVPLSIVIDSNTNTQQNFMLHKNVTVQLTKTLNEPDKCMSFNCSDNNFKESDDDHENEDEDED

Query:  EEDFRRRVEDFIEK---GW
        E   RRRVE+FIEK   GW
Subjt:  EEDFRRRVEDFIEK---GW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGATTCTTTCATTTTGAAACTTGCTACCGAGGCAGCTTCCAGCACTCTGTTCATCTTCTGCTTCTTCAATTTCATCATACTCATCATTCTCTTCTCTAGTTTTCA
TCACCAAAATGATGATGATTATGATGTCCCACTTTCAATTGTCATTGACAGCAACACAAATACACAACAAAATTTCATGCTTCACAAAAATGTCACTGTTCAACTGACAA
AGACCCTAAATGAACCAGATAAATGCATGAGTTTCAACTGCAGTGATAATAATTTTAAAGAGAGTGATGATGATCATGAGAATGAGGACGAGGACGAGGACGAGGAGGAT
TTCAGAAGAAGAGTGGAAGACTTTATTGAAAAGGGTTGGTTGATTGCTATCTCGACTTGGCTACATATTTTCCTACGTGCAATTTTGTTTACTAGGGGTGCCAAACAACA
TCGAATTCATTATTTCCAAATAAGAACACTCCAGAGCAGTGAATCAAAACCTCTTGCATATCTTAGTAGTTATGATGATCTAAAATCTAAAATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGATTCTTTCATTTTGAAACTTGCTACCGAGGCAGCTTCCAGCACTCTGTTCATCTTCTGCTTCTTCAATTTCATCATACTCATCATTCTCTTCTCTAGTTTTCA
TCACCAAAATGATGATGATTATGATGTCCCACTTTCAATTGTCATTGACAGCAACACAAATACACAACAAAATTTCATGCTTCACAAAAATGTCACTGTTCAACTGACAA
AGACCCTAAATGAACCAGATAAATGCATGAGTTTCAACTGCAGTGATAATAATTTTAAAGAGAGTGATGATGATCATGAGAATGAGGACGAGGACGAGGACGAGGAGGAT
TTCAGAAGAAGAGTGGAAGACTTTATTGAAAAGGGTTGGTTGATTGCTATCTCGACTTGGCTACATATTTTCCTACGTGCAATTTTGTTTACTAGGGGTGCCAAACAACA
TCGAATTCATTATTTCCAAATAAGAACACTCCAGAGCAGTGAATCAAAACCTCTTGCATATCTTAGTAGTTATGATGATCTAAAATCTAAAATATGA
Protein sequenceShow/hide protein sequence
MVDSFILKLATEAASSTLFIFCFFNFIILIILFSSFHHQNDDDYDVPLSIVIDSNTNTQQNFMLHKNVTVQLTKTLNEPDKCMSFNCSDNNFKESDDDHENEDEDEDEED
FRRRVEDFIEKGWLIAISTWLHIFLRAILFTRGAKQHRIHYFQIRTLQSSESKPLAYLSSYDDLKSKI