; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016224 (gene) of Snake gourd v1 genome

Gene IDTan0016224
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionF-box domain LysM domain containing protein
Genome locationLG08:5430063..5432548
RNA-Seq ExpressionTan0016224
SyntenyTan0016224
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0031408 - oxylipin biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR018392 - LysM domain
IPR036047 - F-box-like domain superfamily
IPR036779 - LysM domain superfamily
IPR045030 - LysM and putative peptidoglycan-binding domain-containing protein 1-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586259.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]9.0e-13991.85Show/hide
Query:  MGCCCDQDDDVEILRHLNPSPAVQSPPPQPPP-PDSSTSVLSPMNSHFFALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVK
        MGCCCD+DDDVEILRHL+PSP VQSPP Q P  PDSST+VLSPMNSHFFALSC DILRLIF+KLSIPDLARSSCVSRLW+SVASDQEI++GAFKAPWKVK
Subjt:  MGCCCDQDDDVEILRHLNPSPAVQSPPPQPPP-PDSSTSVLSPMNSHFFALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVK

Query:  DVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIP
        DV+GKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNP+ILINSICYIEMDAIAKREVA LYLDGIP
Subjt:  DVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIP

Query:  TTHHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGDPRAALTEFAEDIRWERHMGIA
        TTHH+YG+ET DQGMSSVQVKKRVLHSLSRSMMVDDETAQYYL+IS+GDPRAALTEFAEDIRWERHMG+A
Subjt:  TTHHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGDPRAALTEFAEDIRWERHMGIA

XP_022937590.1 F-box protein At1g55000 [Cucurbita moschata]4.0e-13992.22Show/hide
Query:  MGCCCDQDDDVEILRHLNPSPAVQSPPPQPPP-PDSSTSVLSPMNSHFFALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVK
        MGCCCD+DDDVEILRHL+PSP VQSPP Q P  PDSST+VLSPMNSHFFALSC DILRLIF+KLSIPDLARSSCVSRLW+SVASDQEI++GAFKAPWKVK
Subjt:  MGCCCDQDDDVEILRHLNPSPAVQSPPPQPPP-PDSSTSVLSPMNSHFFALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVK

Query:  DVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIP
        DV+GKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNP+ILINSICYIEMDAIAKREVA LYLDGIP
Subjt:  DVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIP

Query:  TTHHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGDPRAALTEFAEDIRWERHMGIA
        TTHH+YGKET DQGMSSVQVKKRVLHSLSRSMMVDDETAQYYL+IS+GDPRAALTEFAEDIRWERHMG+A
Subjt:  TTHHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGDPRAALTEFAEDIRWERHMGIA

XP_022965884.1 F-box protein At1g55000 [Cucurbita maxima]4.5e-13891.48Show/hide
Query:  MGCCCDQDDDVEILRHLNPSPAVQSPPPQPPP-PDSSTSVLSPMNSHFFALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVK
        MGCCCD+DDDVEILRHL+PSP VQSPP Q P  P SST+VLSPMNSHFFALSC DILRLIF+KLSIPDLARSSCVSRLW+SVASDQEI++GAFKAPWKVK
Subjt:  MGCCCDQDDDVEILRHLNPSPAVQSPPPQPPP-PDSSTSVLSPMNSHFFALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVK

Query:  DVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIP
        DV+GKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRER+LIPIGNP+ILINSICYIEMDAIAKREVA LYLDGIP
Subjt:  DVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIP

Query:  TTHHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGDPRAALTEFAEDIRWERHMGIA
        TTHH+YGKET DQGMSSVQVKKRVLHSLSRSMMVDDETAQYYL+IS+GDPRAALTEFAEDIRWERHMG+A
Subjt:  TTHHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGDPRAALTEFAEDIRWERHMGIA

XP_023537183.1 F-box protein At1g55000 [Cucurbita pepo subsp. pepo]7.6e-13890.51Show/hide
Query:  MGCCCDQDDDVEILRHLNPSPAVQSPP-----PQPPPPDSSTSVLSPMNSHFFALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAP
        MGCCCD+DDDVEILRHL+PSP VQSPP      QP  PDSST+VLSPMNSHFFALSC DILRLIF+KLSIPDLARSSCVSRLW+SVASDQEI++GAFKAP
Subjt:  MGCCCDQDDDVEILRHLNPSPAVQSPP-----PQPPPPDSSTSVLSPMNSHFFALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAP

Query:  WKVKDVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYL
        WKVKDV+GKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNP+ILINSICYIEMDAIAKREVA LYL
Subjt:  WKVKDVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYL

Query:  DGIPTTHHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGDPRAALTEFAEDIRWERHMGIA
        DGIPTTHH+YGKET D GMSSVQVKKRVLHSLSRSMMVDDETAQYYL+IS+GDPRAALTEFAEDIRWERHMG+A
Subjt:  DGIPTTHHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGDPRAALTEFAEDIRWERHMGIA

XP_038877035.1 F-box protein At1g55000 [Benincasa hispida]4.9e-13790.33Show/hide
Query:  MGCCCDQDDDVEILRHLNPSPAVQSPPPQPPPPDSSTSVLSPMNSHFFALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVKD
        MGCCCDQDDDVEILRHLNPSP VQS PP+PPP DSS  VLSPMNSHF ALSC DILRLIF+ LSIPDLARSSCVSRLWHSVASDQEI++GAFKAPWKVKD
Subjt:  MGCCCDQDDDVEILRHLNPSPAVQSPPPQPPPPDSSTSVLSPMNSHFFALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVKD

Query:  VVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIPT
        VVGKPSS SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNM+SDHGIYSRERLLIPIGNP+ILINSICYIEMDAIAKREVA+LYLDGIP 
Subjt:  VVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIPT

Query:  THHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGDPRAALTEFAEDIRWERHMGIA
        THH+YGKETC++GMSSVQV KRVLH LSRSMMVDDETAQYYL+ISNGDPRAALTEFAEDIRWERH+ IA
Subjt:  THHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGDPRAALTEFAEDIRWERHMGIA

TrEMBL top hitse value%identityAlignment
A0A0A0LFS6 LysM domain-containing protein2.0e-13689.59Show/hide
Query:  MGCCCDQDDDVEILRHLNPSPAVQSPPPQPPPPDSSTSVLSPMNSHFFALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVKD
        MGCCCDQDDDVEILRHLNPSPA+ SPPPQPPP D S ++LSPMNSHFFALSC DILRLIF+ LSIPDLARSSCV RLWHSVASDQEI++GAFKAPWKVKD
Subjt:  MGCCCDQDDDVEILRHLNPSPAVQSPPPQPPPPDSSTSVLSPMNSHFFALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVKD

Query:  VVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIPT
        VVGKPSS SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNP++LINSICYIEMDAIAKREVA+LYLDGIP 
Subjt:  VVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIPT

Query:  THHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGDPRAALTEFAEDIRWERHMGIA
        T H+YGK T +QGMSSVQV KRVLHSLSRSMMVDDETAQYYL+ISNG+PRAALTEFAEDIRWERHM IA
Subjt:  THHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGDPRAALTEFAEDIRWERHMGIA

A0A5A7TYE5 Lipoxygenase8.9e-10889.91Show/hide
Query:  MGCCCDQDDDVEILRHLNPSPAVQSPPPQPPPPDSSTSVLSPMNSHFFALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVKD
        MGCCCDQDDDVEILRHLNPSP V SPP QPPP D ST++LSPMNSHFFALSC DILRLIF+ LSIPDLARSSCV RLWHSVASDQEI+AGAFKAPWKVKD
Subjt:  MGCCCDQDDDVEILRHLNPSPAVQSPPPQPPPPDSSTSVLSPMNSHFFALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVKD

Query:  VVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIPT
        VVGKPSS SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNP+ILINSICYIEMDAIAKREVA+LYLDGIP 
Subjt:  VVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIPT

Query:  THHMYGKETCDQGMSSVQ
        T H+YGK T +QGMSSVQ
Subjt:  THHMYGKETCDQGMSSVQ

A0A6J1D9A3 F-box protein At1g550002.9e-13589.22Show/hide
Query:  MGCCCDQDDDVEILRHLNPSPAVQSPPPQPPPPDSSTSVLSPMNSHFFALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVKD
        MGCCCDQDDDVEILRHLNP+ AV SP   PP  DSST+VLSPMNSHFFALSC DILRLIF+KLSIPDLARSSCV RLW SVASD EI+AGAFKAPWK+KD
Subjt:  MGCCCDQDDDVEILRHLNPSPAVQSPPPQPPPPDSSTSVLSPMNSHFFALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVKD

Query:  VVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIPT
        V+GKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV+DIKRLNNMMSDHGIYSRERLLIPIGNP+ILINSICYIEMDAIAKREVA+LYLDGIPT
Subjt:  VVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIPT

Query:  THHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGDPRAALTEFAEDIRWERHMGIA
        THH+YGK TC+QGMSSVQV K+VLHSLSRSMMVDDETA+YYL+IS+GDPRAALTEFAEDIRWERHM IA
Subjt:  THHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGDPRAALTEFAEDIRWERHMGIA

A0A6J1FH66 F-box protein At1g550002.0e-13992.22Show/hide
Query:  MGCCCDQDDDVEILRHLNPSPAVQSPPPQPPP-PDSSTSVLSPMNSHFFALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVK
        MGCCCD+DDDVEILRHL+PSP VQSPP Q P  PDSST+VLSPMNSHFFALSC DILRLIF+KLSIPDLARSSCVSRLW+SVASDQEI++GAFKAPWKVK
Subjt:  MGCCCDQDDDVEILRHLNPSPAVQSPPPQPPP-PDSSTSVLSPMNSHFFALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVK

Query:  DVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIP
        DV+GKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNP+ILINSICYIEMDAIAKREVA LYLDGIP
Subjt:  DVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIP

Query:  TTHHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGDPRAALTEFAEDIRWERHMGIA
        TTHH+YGKET DQGMSSVQVKKRVLHSLSRSMMVDDETAQYYL+IS+GDPRAALTEFAEDIRWERHMG+A
Subjt:  TTHHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGDPRAALTEFAEDIRWERHMGIA

A0A6J1HS58 F-box protein At1g550002.2e-13891.48Show/hide
Query:  MGCCCDQDDDVEILRHLNPSPAVQSPPPQPPP-PDSSTSVLSPMNSHFFALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVK
        MGCCCD+DDDVEILRHL+PSP VQSPP Q P  P SST+VLSPMNSHFFALSC DILRLIF+KLSIPDLARSSCVSRLW+SVASDQEI++GAFKAPWKVK
Subjt:  MGCCCDQDDDVEILRHLNPSPAVQSPPPQPPP-PDSSTSVLSPMNSHFFALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVK

Query:  DVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIP
        DV+GKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRER+LIPIGNP+ILINSICYIEMDAIAKREVA LYLDGIP
Subjt:  DVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIP

Query:  TTHHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGDPRAALTEFAEDIRWERHMGIA
        TTHH+YGKET DQGMSSVQVKKRVLHSLSRSMMVDDETAQYYL+IS+GDPRAALTEFAEDIRWERHMG+A
Subjt:  TTHHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGDPRAALTEFAEDIRWERHMGIA

SwissProt top hitse value%identityAlignment
Q7Z3D4 LysM and putative peptidoglycan-binding domain-containing protein 31.8e-0430.3Show/hide
Query:  SDQEIL---AGAFKAPWKVKDVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSIC
        SD +IL   A  ++   + K+ V + +S    RD       ++  I  GD+L ++A++Y   V DIKR+NN++SD   ++   + IP+   S L  ++C
Subjt:  SDQEIL---AGAFKAPWKVKDVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSIC

Q9FZ32 F-box protein At1g550001.4e-7360.45Show/hide
Query:  ALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVKDVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRL
        AL C D L +IF+KL++ DLAR+SCV ++W+SVA++ +++  AF APW++K++VG+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV+DIKRL
Subjt:  ALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVKDVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIPTTHHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGD
        NNMMSDHGIYSR+RLLIPI NP IL N+ CY+E+D  AKREVA+LYL+G P         T  Q   S   K+R++ SL RSM VDD TA YYL I+ GD
Subjt:  NNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIPTTHHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGD

Query:  PRAALTEFAEDIRWERHMGI
        PR+AL+EF+ D+RWER  G+
Subjt:  PRAALTEFAEDIRWERHMGI

Arabidopsis top hitse value%identityAlignment
AT1G55000.1 peptidoglycan-binding LysM domain-containing protein9.8e-7560.45Show/hide
Query:  ALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVKDVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRL
        AL C D L +IF+KL++ DLAR+SCV ++W+SVA++ +++  AF APW++K++VG+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV+DIKRL
Subjt:  ALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVKDVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIPTTHHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGD
        NNMMSDHGIYSR+RLLIPI NP IL N+ CY+E+D  AKREVA+LYL+G P         T  Q   S   K+R++ SL RSM VDD TA YYL I+ GD
Subjt:  NNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIPTTHHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGD

Query:  PRAALTEFAEDIRWERHMGI
        PR+AL+EF+ D+RWER  G+
Subjt:  PRAALTEFAEDIRWERHMGI

AT1G55000.2 peptidoglycan-binding LysM domain-containing protein9.8e-7560.45Show/hide
Query:  ALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVKDVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRL
        AL C D L +IF+KL++ DLAR+SCV ++W+SVA++ +++  AF APW++K++VG+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV+DIKRL
Subjt:  ALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVKDVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIPTTHHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGD
        NNMMSDHGIYSR+RLLIPI NP IL N+ CY+E+D  AKREVA+LYL+G P         T  Q   S   K+R++ SL RSM VDD TA YYL I+ GD
Subjt:  NNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIPTTHHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGD

Query:  PRAALTEFAEDIRWERHMGI
        PR+AL+EF+ D+RWER  G+
Subjt:  PRAALTEFAEDIRWERHMGI

AT1G55000.3 peptidoglycan-binding LysM domain-containing protein9.8e-7560.45Show/hide
Query:  ALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVKDVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRL
        AL C D L +IF+KL++ DLAR+SCV ++W+SVA++ +++  AF APW++K++VG+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV+DIKRL
Subjt:  ALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVKDVVGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIPTTHHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGD
        NNMMSDHGIYSR+RLLIPI NP IL N+ CY+E+D  AKREVA+LYL+G P         T  Q   S   K+R++ SL RSM VDD TA YYL I+ GD
Subjt:  NNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIPTTHHMYGKETCDQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLNISNGD

Query:  PRAALTEFAEDIRWERHMGI
        PR+AL+EF+ D+RWER  G+
Subjt:  PRAALTEFAEDIRWERHMGI

AT5G08200.1 peptidoglycan-binding LysM domain-containing protein8.7e-0740Show/hide
Query:  PSSGS--FWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPI
        PSS S  F   N   +  I HRI + D+LA +A+KY V+V D+K++NN+++D  +++ + L IP+
Subjt:  PSSGS--FWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPI

AT5G23130.1 Peptidoglycan-binding LysM domain-containing protein7.4e-0641.27Show/hide
Query:  PSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPI
        PSS S     C G   I HR+ + D+LA +A+KY V+V DI +LN +++D  +++ E L IP+
Subjt:  PSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGCTGTTGCGACCAAGACGACGACGTGGAGATCCTGAGGCACCTCAATCCCTCGCCGGCCGTTCAGTCTCCACCGCCCCAACCTCCGCCACCGGATTCCTCCAC
TTCCGTACTGTCTCCGATGAACTCTCACTTCTTCGCCCTCTCCTGTCCCGACATCCTCCGCCTCATCTTCAAGAAGCTTTCCATCCCCGACTTGGCTCGTTCCAGCTGCG
TTTCTCGTCTCTGGCACTCTGTTGCTTCCGATCAGGAAATTCTCGCTGGAGCTTTCAAAGCGCCGTGGAAGGTGAAGGACGTGGTCGGAAAGCCGAGCTCCGGGAGCTTC
TGGAGAGATAATTGTCTTGGAAAGTTTGCGATCTCTCATCGGATTCTCCGCGGCGATAGCTTGGCTAGTCTTGCCGTTAAGTATTCGGTTCAGGTTATAGACATTAAACG
TCTAAACAACATGATGAGCGACCATGGCATATACTCAAGAGAAAGATTGCTAATCCCCATTGGCAATCCCAGTATTCTAATCAACAGTATATGCTACATCGAGATGGATG
CTATCGCCAAACGGGAAGTTGCAATGTTGTATTTGGATGGAATCCCCACAACCCATCACATGTATGGGAAGGAGACGTGTGATCAGGGTATGTCCTCTGTTCAAGTGAAG
AAGCGGGTACTTCATTCGTTGAGTCGGAGCATGATGGTTGATGATGAAACTGCTCAATATTACTTGAACATTTCCAATGGCGATCCTCGAGCTGCTCTCACAGAATTCGC
CGAGGACATCAGGTGGGAGAGGCATATGGGCATTGCCTAG
mRNA sequenceShow/hide mRNA sequence
TTTCTCTCTCTCTATCTCTCTAAAATGGGTTGCTGTTGCGACCAAGACGACGACGTGGAGATCCTGAGGCACCTCAATCCCTCGCCGGCCGTTCAGTCTCCACCGCCCCA
ACCTCCGCCACCGGATTCCTCCACTTCCGTACTGTCTCCGATGAACTCTCACTTCTTCGCCCTCTCCTGTCCCGACATCCTCCGCCTCATCTTCAAGAAGCTTTCCATCC
CCGACTTGGCTCGTTCCAGCTGCGTTTCTCGTCTCTGGCACTCTGTTGCTTCCGATCAGGAAATTCTCGCTGGAGCTTTCAAAGCGCCGTGGAAGGTGAAGGACGTGGTC
GGAAAGCCGAGCTCCGGGAGCTTCTGGAGAGATAATTGTCTTGGAAAGTTTGCGATCTCTCATCGGATTCTCCGCGGCGATAGCTTGGCTAGTCTTGCCGTTAAGTATTC
GGTTCAGGTTATAGACATTAAACGTCTAAACAACATGATGAGCGACCATGGCATATACTCAAGAGAAAGATTGCTAATCCCCATTGGCAATCCCAGTATTCTAATCAACA
GTATATGCTACATCGAGATGGATGCTATCGCCAAACGGGAAGTTGCAATGTTGTATTTGGATGGAATCCCCACAACCCATCACATGTATGGGAAGGAGACGTGTGATCAG
GGTATGTCCTCTGTTCAAGTGAAGAAGCGGGTACTTCATTCGTTGAGTCGGAGCATGATGGTTGATGATGAAACTGCTCAATATTACTTGAACATTTCCAATGGCGATCC
TCGAGCTGCTCTCACAGAATTCGCCGAGGACATCAGGTGGGAGAGGCATATGGGCATTGCCTAGTTTCAGAAAGCCAGATTGTTGCTCGGGGTAAAGATATATACTGTGT
AAACTATATACGCTACCGAGCTACTGGAACGTGTTTATCTTCTCCATCTCCACAAAGAATGATCAGACTAAGAATCCATTTTCAGCACCATTTCACTGATTTGTATGTAC
ATCTACATTCTTCCTGTCATTTGAGTGAGGGTTTTGGCCGTGTTTCGCTAAACCCTATTGTATATATATTATATCTTTTCATATTGCTGGAAGACGATGATGCTATAATC
ACTGTAACTGTAAATTGAAGATACTTGGG
Protein sequenceShow/hide protein sequence
MGCCCDQDDDVEILRHLNPSPAVQSPPPQPPPPDSSTSVLSPMNSHFFALSCPDILRLIFKKLSIPDLARSSCVSRLWHSVASDQEILAGAFKAPWKVKDVVGKPSSGSF
WRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPSILINSICYIEMDAIAKREVAMLYLDGIPTTHHMYGKETCDQGMSSVQVK
KRVLHSLSRSMMVDDETAQYYLNISNGDPRAALTEFAEDIRWERHMGIA