CuGenDBv2

Gene ID	Tan0016227
Organism	Trichosanthes anguina (Snake gourd v1)
Description	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic
Genome location	LG05:20218350..20218712
RNA-Seq Expression	Tan0016227
Synteny	Tan0016227
Gene Ontology terms	GO:0006091 - generation of precursor metabolites and energy (biological process) GO:0009507 - chloroplast (cellular component) GO:0009579 - thylakoid (cellular component) GO:0031090 - organelle membrane (cellular component) GO:0031967 - organelle envelope (cellular component) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domains	IPR000440 - NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 IPR038430 - NADH:ubiquinone oxidoreductase, subunit 3 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AXU40442.1 NADH-plastoquinone oxidoreductase subunit 3 [Gomphogyne cissiformis var. villosa]

6.8e-33

73.33

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Query:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEYEIF VFLIISSVIPILAF ISGVL+PLSK+PEKLS                         +FVVFDVET FLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWQKGALEWS
        VLILIVGLVYAW+KGALEWS
Subjt:  VLILIVGLVYAWQKGALEWS

YP_009004049.1 NADH-plastoquinone oxidoreductase subunit 3 [Cucumis hystrix]

5.2e-33

73.33

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Query:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IF VFLIISSVIPILAF ISGVLAPLSK+PEKLS                         +FVVFDVET FLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWQKGALEWS
        VLILIVGLVYAW+KGALEWS
Subjt:  VLILIVGLVYAWQKGALEWS

YP_009236285.1 NADH-plastoquinone oxidoreductase subunit 3 [Gynostemma pentaphyllum]

5.2e-33

73.33

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Query:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IF VFLIISSVIPILAF ISGVLAPLSK+PEKLS                         +FVVFDVET FLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWQKGALEWS
        VLILIVGLVYAW+KGALEWS
Subjt:  VLILIVGLVYAWQKGALEWS

YP_009447455.1 NADH dehydrogenase subunit 3 [Cucurbita maxima]

5.2e-33

73.33

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Query:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IF VFLIISSVIPILAF ISGVLAPLSK+PEKLS                         +FVVFDVET FLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWQKGALEWS
        VLILIVGLVYAW+KGALEWS
Subjt:  VLILIVGLVYAWQKGALEWS

YP_009752164.1 NADH dehydrogenase subunit C [Linnaeosicyos amara]

4.0e-33

73.33

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Query:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IF VFLIISSVIPILAFRISGVLAPL K+PEKLS                         +FVVFDVET FLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWQKGALEWS
        VLILIVGLVYAW+KGALEWS
Subjt:  VLILIVGLVYAWQKGALEWS

TrEMBL top hits

e value

%identity

Alignment

A0A109X0A8 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

2.5e-33

73.33

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Query:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IF VFLIISSVIPILAF ISGVLAPLSK+PEKLS                         +FVVFDVET FLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWQKGALEWS
        VLILIVGLVYAW+KGALEWS
Subjt:  VLILIVGLVYAWQKGALEWS

A0A1X9Q1U8 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

2.5e-33

73.33

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Query:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IF VFLIISSVIPILAF ISGVLAPLSK+PEKLS                         +FVVFDVET FLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWQKGALEWS
        VLILIVGLVYAW+KGALEWS
Subjt:  VLILIVGLVYAWQKGALEWS

A0A218KG53 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

2.5e-33

73.33

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Query:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IF VFLIISSVIPILAF ISGVLAPLSK+PEKLS                         +FVVFDVET FLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWQKGALEWS
        VLILIVGLVYAW+KGALEWS
Subjt:  VLILIVGLVYAWQKGALEWS

A0A6H0ETI4 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

2.5e-33

73.33

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Query:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IF VFLIISSVIPILAF ISGVLAPLSK+PEKLS                         +FVVFDVET FLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWQKGALEWS
        VLILIVGLVYAW+KGALEWS
Subjt:  VLILIVGLVYAWQKGALEWS

A0A6H0EV73 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

1.9e-33

73.33

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Query:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IF VFLIISSVIPILAFRISGVLAPL K+PEKLS                         +FVVFDVET FLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWQKGALEWS
        VLILIVGLVYAW+KGALEWS
Subjt:  VLILIVGLVYAWQKGALEWS

SwissProt top hits

e value

%identity

Alignment

B2XWK9 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

1.7e-34

69.17

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Query:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IF  FL+ISSVIPILAF +SG+LAP+ KDPEKLS                         +FVVFDVET FLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWQKGALEWS
        VLILIVGLVYAW+KGALEWS
Subjt:  VLILIVGLVYAWQKGALEWS

P52765 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

2.2e-34

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Query:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IF  FLIISS+IPILAF ISG+LAP+SK PEKLS                         +FVVFDVET FLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWQKGALEWS
        VLILIVGLVYAW+KGALEWS
Subjt:  VLILIVGLVYAWQKGALEWS

Q49KZ3 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

7.6e-35

70.83

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Query:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IF  FLIISSVIPILAF ISG+LAP+SK PEKLS                         +FVVFDVET FLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWQKGALEWS
        VLILIVGLVYAW+KGALEWS
Subjt:  VLILIVGLVYAWQKGALEWS

Q4VZH0 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

6.9e-36

73.33

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Query:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IF VFLIISSVIPILAF ISGVLAPLSK+PEKLS                         +FVVFDVET FLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWQKGALEWS
        VLILIVGLVYAW+KGALEWS
Subjt:  VLILIVGLVYAWQKGALEWS

Q68S01 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

2.2e-34

70.83

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Query:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IF  FLIISS+IPILAF ISGVLAP+SK PEKLS                         +FVVFDVET FLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWQKGALEWS
        VLILIVGLVYAW+KGALEWS
Subjt:  VLILIVGLVYAWQKGALEWS

Arabidopsis top hits

e value

%identity

Alignment

ATCG00440.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein

5.6e-33

Show/hide

Query:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IF  FL+ISS IP+LAF ISGVL+P+ K PEKLS                         +FVVFDVET FLYPWAMSFDVLGVS FIEA IF
Subjt:  MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLS-------------------------IFVVFDVETSFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWQKGALEWS
        VLILI+GLVYAW+KGALEWS
Subjt:  VLILIVGLVYAWQKGALEWS

Sequences

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CDS sequence

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ATGTTTCTGCTTTACGAATATGAGATTTTTGGGGTATTTCTAATAATATCAAGTGTTATTCCTATTTTGGCATTTCGAATTTCTGGAGTTTTAGCCCCTCTTAGCAAAGA
TCCAGAGAAACTTTCGATTTTTGTTGTTTTTGATGTTGAAACGAGTTTTCTTTATCCATGGGCAATGAGTTTTGATGTATTGGGGGTATCCGTCTTTATAGAAGCTTTAA
TTTTCGTGCTTATCCTAATTGTCGGTTTAGTTTATGCATGGCAAAAAGGAGCATTGGAATGGTCTTAG

mRNA sequence

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Protein sequence

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MFLLYEYEIFGVFLIISSVIPILAFRISGVLAPLSKDPEKLSIFVVFDVETSFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWQKGALEWS

Tan0016227 (gene) of Snake gourd v1 genome