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Tan0016230 (gene) of Snake gourd v1 genome

Gene IDTan0016230
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 31
Genome locationLG03:60333200..60333565
RNA-Seq ExpressionTan0016230
SyntenyTan0016230
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027448.1 Protein RALF-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma]7.4e-3262.71Show/hide
Query:  KLCLFLFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAEVSEHGRHLLFQYGYD-TTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERV
        KLCL L ++VV   P  S            Y APD+AFFGG  PA+++E GR LLFQYGYD T K  R++YLSY AL  NNIPCGRRGSSYYDCRKR R+
Subjt:  KLCLFLFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAEVSEHGRHLLFQYGYD-TTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERV

Query:  NPYRRGCSALTGCARFLD
        NPYRRGC+A+TGCARF D
Subjt:  NPYRRGCSALTGCARFLD

XP_022925244.1 protein RALF-like 31 [Cucurbita moschata]1.8e-3363.11Show/hide
Query:  MGLMKLCLFLFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAEVSEHGRHLLFQYGYD-TTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK
        MG MKLCL L ++VV   P  S            Y APD+AFFGG  PA+++E GR LLFQYGYD T K  R++YLSY AL  NNIPCGRRGSSYYDCRK
Subjt:  MGLMKLCLFLFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAEVSEHGRHLLFQYGYD-TTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK

Query:  RERVNPYRRGCSALTGCARFLD
        R R+NPYRRGC+A+TGCARF D
Subjt:  RERVNPYRRGCSALTGCARFLD

XP_022989015.1 protein RALF-like 4 [Cucurbita maxima]1.4e-3055.37Show/hide
Query:  MGLMKLCLFLFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAEVSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR
        M  MK+CLFL ++  VV P S AF E++ D +       ++FFGG +   ++E  R  LFQYG+     +RK++L+YYAL KNNIPCGRRGSSYYDC+KR
Subjt:  MGLMKLCLFLFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAEVSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR

Query:  ERVNPYRRGCSALTGCARFLD
         R+NPYRRGC+A+TGCARF D
Subjt:  ERVNPYRRGCSALTGCARFLD

XP_023531888.1 protein RALF-like 4 [Cucurbita pepo subsp. pepo]1.4e-3056.2Show/hide
Query:  MGLMKLCLFLFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAEVSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR
        MG MKLC+FL ++ VVV P S AF E++   +       ++FFGG +   ++E  R  LFQYG+     +RK+ LSYYAL KNNIPCGRRG+SYYDC+KR
Subjt:  MGLMKLCLFLFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAEVSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR

Query:  ERVNPYRRGCSALTGCARFLD
         R+NPYRRGC+A+TGCARF D
Subjt:  ERVNPYRRGCSALTGCARFLD

XP_038876152.1 uncharacterized protein LOC120068449 [Benincasa hispida]7.4e-3259.5Show/hide
Query:  MGLMKLCLFLFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAEVSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR
        MG MKLCLFL ++V  V+P S A+     DW  AYGAP++AF+G  TP    E  R LLFQYG+   KY R +YLSY ALRKNN+PCG RG SYYDC + 
Subjt:  MGLMKLCLFLFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAEVSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR

Query:  ERVNPYRRGCSALTGCARFLD
        ++ NPYRRGC+A+TGCARF D
Subjt:  ERVNPYRRGCSALTGCARFLD

TrEMBL top hitse value%identityAlignment
A0A6J1EBL1 protein RALF-like 318.5e-3463.11Show/hide
Query:  MGLMKLCLFLFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAEVSEHGRHLLFQYGYD-TTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK
        MG MKLCL L ++VV   P  S            Y APD+AFFGG  PA+++E GR LLFQYGYD T K  R++YLSY AL  NNIPCGRRGSSYYDCRK
Subjt:  MGLMKLCLFLFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAEVSEHGRHLLFQYGYD-TTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK

Query:  RERVNPYRRGCSALTGCARFLD
        R R+NPYRRGC+A+TGCARF D
Subjt:  RERVNPYRRGCSALTGCARFLD

A0A6J1EI16 protein RALF-like 195.7e-3054.55Show/hide
Query:  MGLMKLCLFLFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAEVSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR
        MG MKL +F+ ++ VV  P S A  E++   +       ++FFGG +   ++E  R  LFQYG+   K +RK+YLSYYALR+NNIPCGRRG+SYYDC+KR
Subjt:  MGLMKLCLFLFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAEVSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR

Query:  ERVNPYRRGCSALTGCARFLD
         R+NPYRRGC+A+TGCARF D
Subjt:  ERVNPYRRGCSALTGCARFLD

A0A6J1EIU0 protein RALF-like 49.7e-3054.1Show/hide
Query:  MGLMKLCLF-LFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAEVSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK
        M  +KLCLF LF++ VV  P S A+ E++ D +       ++FFGG +   ++E  R  LFQYG+   K +R+++L+YYAL KNNIPCGRRG+SYYDC+K
Subjt:  MGLMKLCLF-LFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAEVSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK

Query:  RERVNPYRRGCSALTGCARFLD
        R R+NPYRRGC+A+TGCARF D
Subjt:  RERVNPYRRGCSALTGCARFLD

A0A6J1JL71 protein RALF-like 46.7e-3155.37Show/hide
Query:  MGLMKLCLFLFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAEVSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR
        M  MK+CLFL ++  VV P S AF E++ D +       ++FFGG +   ++E  R  LFQYG+     +RK++L+YYAL KNNIPCGRRGSSYYDC+KR
Subjt:  MGLMKLCLFLFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAEVSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR

Query:  ERVNPYRRGCSALTGCARFLD
         R+NPYRRGC+A+TGCARF D
Subjt:  ERVNPYRRGCSALTGCARFLD

A0A6J1JN66 protein RALF-like 43.3e-3055.37Show/hide
Query:  MGLMKLCLFLFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAEVSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR
        MG MKL +FL ++ VVV P S A  E++   +      +++FFGG +   ++E  R  LFQYG+   K +RK+YLSYYALR+NNIPCGRRG+SYYDC+KR
Subjt:  MGLMKLCLFLFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAEVSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR

Query:  ERVNPYRRGCSALTGCARFLD
          +NPYRRGC+A+TGCARF D
Subjt:  ERVNPYRRGCSALTGCARFLD

SwissProt top hitse value%identityAlignment
Q6NME6 Protein RALF-like 195.0e-1569.39Show/hide
Query:  SRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR
        +R+ Y+SY ALRKNN+PC RRG SYYDC+KR+R NPYRRGCS +T C R
Subjt:  SRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR

Q8L9P8 Protein RALF-like 331.1e-1163.04Show/hide
Query:  KYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR
        KY+SY ALR+N +PC RRG+SYY+CR+  + NPY RGCSA+T C R
Subjt:  KYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR

Q9FZA0 Protein RALF-like 44.2e-1466.67Show/hide
Query:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCARF
        ++Y+ Y AL+KNN+PC RRG SYYDC+KR R NPYRRGCSA+T C R+
Subjt:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCARF

Q9LUS7 Rapid alkalinization factor 231.1e-1161.7Show/hide
Query:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR
        ++Y+SY ALR+N IPC RRG+SYY+CR+  + NPY RGCSA+T C R
Subjt:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR

Q9MA62 Protein RALF-like 222.0e-1136.04Show/hide
Query:  LFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTP--AEVSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYR
        +  IV+     +  F +S  D+ RA  +   + F G T   AE       + F         ++KKY+SY A+R+N++PC RRG+SYY+C++  + NPY 
Subjt:  LFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTP--AEVSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYR

Query:  RGCSALTGCAR
        RGCS +T C R
Subjt:  RGCSALTGCAR

Arabidopsis top hitse value%identityAlignment
AT1G28270.1 ralf-like 43.0e-1566.67Show/hide
Query:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCARF
        ++Y+ Y AL+KNN+PC RRG SYYDC+KR R NPYRRGCSA+T C R+
Subjt:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCARF

AT2G33775.1 ralf-like 193.5e-1669.39Show/hide
Query:  SRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR
        +R+ Y+SY ALRKNN+PC RRG SYYDC+KR+R NPYRRGCS +T C R
Subjt:  SRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR

AT3G05490.1 ralf-like 221.4e-1236.04Show/hide
Query:  LFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTP--AEVSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYR
        +  IV+     +  F +S  D+ RA  +   + F G T   AE       + F         ++KKY+SY A+R+N++PC RRG+SYY+C++  + NPY 
Subjt:  LFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTP--AEVSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYR

Query:  RGCSALTGCAR
        RGCS +T C R
Subjt:  RGCSALTGCAR

AT3G16570.1 rapid alkalinization factor 238.2e-1361.7Show/hide
Query:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR
        ++Y+SY ALR+N IPC RRG+SYY+CR+  + NPY RGCSA+T C R
Subjt:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR

AT4G15800.1 ralf-like 338.2e-1363.04Show/hide
Query:  KYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR
        KY+SY ALR+N +PC RRG+SYY+CR+  + NPY RGCSA+T C R
Subjt:  KYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTGATGAAGCTCTGCCTATTTCTCTTCATCATCGTTGTCGTCGTCACCCCTCATTCTTCTGCTTTTCCTGAAAGCACGAAGGACTGGGCTCGGGCCTACGGCGC
TCCTGATTTTGCCTTCTTTGGTGGACTCACACCTGCCGAGGTGAGCGAACATGGTCGACATCTACTTTTTCAATATGGATACGACACGACGAAGTACTCTCGTAAGAAGT
ATTTGAGTTACTATGCGCTTAGGAAGAACAACATACCTTGTGGTCGTCGTGGTAGCTCTTACTATGACTGTAGGAAGCGTGAGAGGGTTAACCCTTACCGTCGTGGTTGC
AGTGCCTTAACCGGTTGCGCTCGGTTCCTCGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTGATGAAGCTCTGCCTATTTCTCTTCATCATCGTTGTCGTCGTCACCCCTCATTCTTCTGCTTTTCCTGAAAGCACGAAGGACTGGGCTCGGGCCTACGGCGC
TCCTGATTTTGCCTTCTTTGGTGGACTCACACCTGCCGAGGTGAGCGAACATGGTCGACATCTACTTTTTCAATATGGATACGACACGACGAAGTACTCTCGTAAGAAGT
ATTTGAGTTACTATGCGCTTAGGAAGAACAACATACCTTGTGGTCGTCGTGGTAGCTCTTACTATGACTGTAGGAAGCGTGAGAGGGTTAACCCTTACCGTCGTGGTTGC
AGTGCCTTAACCGGTTGCGCTCGGTTCCTCGATTAA
Protein sequenceShow/hide protein sequence
MGLMKLCLFLFIIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAEVSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGC
SALTGCARFLD