; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016277 (gene) of Snake gourd v1 genome

Gene IDTan0016277
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein Iojap-related, mitochondrial
Genome locationLG02:91037540..91039956
RNA-Seq ExpressionTan0016277
SyntenyTan0016277
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0090071 - negative regulation of ribosome biogenesis (biological process)
GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domainsIPR004394 - Protein Iojap/ribosomal silencing factor RsfS
IPR043519 - Nucleotidyltransferase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131306.1 protein Iojap-related, mitochondrial [Momordica charantia]2.8e-8689.07Show/hide
Query:  MLAVQRIRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        ML  QRIRSS +FSSTIRSLQ WN+G+ VHNHT+ SSTASSSN GLLDLQEVET+L NVKADDVKVIP+RKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAVQRIRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETPEDDSSQDLDKALVKIRRKNNSKKPAQK
        +KQKQKGARQL+LPSVEGQEDGKWIVIDSGKVVVHALDE ARTYYNLESLWSTET  DDSSQDLD+ALVKIRRKNNSKKPAQK
Subjt:  VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETPEDDSSQDLDKALVKIRRKNNSKKPAQK

XP_022961631.1 protein Iojap-related, mitochondrial [Cucurbita moschata]9.5e-8789.84Show/hide
Query:  MLAVQRIRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLA QRIRSS + SSTIR LQLWNRGV V NHTL SSTASS  +GLLDLQEVETIL NVKADDV+VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAVQRIRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETPEDDSSQDLDKALVKIRRKNNSKKPAQKVLNK
        VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDE ARTYYNLESLWS +TP+DDSSQ+LD+ALVKIRRKNNSKKPAQKVLNK
Subjt:  VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETPEDDSSQDLDKALVKIRRKNNSKKPAQKVLNK

XP_022997359.1 protein Iojap-related, mitochondrial [Cucurbita maxima]1.6e-8691.26Show/hide
Query:  MLAVQRIRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLA QRIRSS + SSTIR LQLWNRGV V NHTL SSTASS N+GLLDLQEVETIL NVKADDV+VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAVQRIRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETPEDDSSQDLDKALVKIRRKNNSKKPAQK
        VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWST+TP+DDSSQ+LD+ALVKIRRKNNSKKPAQK
Subjt:  VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETPEDDSSQDLDKALVKIRRKNNSKKPAQK

XP_023545975.1 protein Iojap-related, mitochondrial [Cucurbita pepo subsp. pepo]3.6e-8689.3Show/hide
Query:  MLAVQRIRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        ML  QRIRSS + SSTIR LQLWNRGV V NHTL SSTASS  +GLLDLQEVETIL NVKADDV+VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAVQRIRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETPEDDSSQDLDKALVKIRRKNNSKKPAQKVLNK
        VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDE ARTYYNLESLWS +TP+DDSSQ+LD+ALVKIRRKNNSKKPAQKVLNK
Subjt:  VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETPEDDSSQDLDKALVKIRRKNNSKKPAQKVLNK

XP_038884261.1 protein Iojap-related, mitochondrial [Benincasa hispida]4.3e-8789.84Show/hide
Query:  MLAVQRIRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLA QRI+SS +FSSTIRSLQLWNRGV VHNH L SSTASS+NKGLLDLQEVETIL NVKADDVKVI VRK+CDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAVQRIRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETPEDDSSQDLDKALVKIRRKNNSKKPAQKVLNK
        VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDE AR+YYNLESLWSTETP+DDSSQDLD+A VKIR KNNSKKPAQK+LN+
Subjt:  VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETPEDDSSQDLDKALVKIRRKNNSKKPAQKVLNK

TrEMBL top hitse value%identityAlignment
A0A1S3BB26 protein Iojap-related, mitochondrial7.6e-8287.5Show/hide
Query:  MLAVQRIRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLA QRIRSS +FSSTIR LQLWNRGV VH+H L SST+SS +K LLDLQEVETIL  VKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAVQRIRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETPEDDSSQDLDKALVKIRRKNNS-KKPAQK
        VKQKQKGA+QLVLPSVEGQE+GKWIVIDSGKVVVHALDE AR+YYNLESLWSTETP DDS+QDLD+ALVKIR KNNS KKPAQK
Subjt:  VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETPEDDSSQDLDKALVKIRRKNNS-KKPAQK

A0A5A7UYH0 Protein Iojap-related3.8e-8186.96Show/hide
Query:  MLAVQRIRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLA QRIR S +FSSTIR LQLWNRGV VH+H L SST+SS +K LLDLQEVETIL  VKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAVQRIRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETPEDDSSQDLDKALVKIRRKNNS-KKPAQK
        VKQKQKGA+QLVLPSVEGQE+GKWIVIDSGKVVVHALDE AR+YYNLESLWSTETP DDS+QDLD+ALVKIR KNNS KKPAQK
Subjt:  VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETPEDDSSQDLDKALVKIRRKNNS-KKPAQK

A0A6J1BP74 protein Iojap-related, mitochondrial1.3e-8689.07Show/hide
Query:  MLAVQRIRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        ML  QRIRSS +FSSTIRSLQ WN+G+ VHNHT+ SSTASSSN GLLDLQEVET+L NVKADDVKVIP+RKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAVQRIRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETPEDDSSQDLDKALVKIRRKNNSKKPAQK
        +KQKQKGARQL+LPSVEGQEDGKWIVIDSGKVVVHALDE ARTYYNLESLWSTET  DDSSQDLD+ALVKIRRKNNSKKPAQK
Subjt:  VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETPEDDSSQDLDKALVKIRRKNNSKKPAQK

A0A6J1HAW7 protein Iojap-related, mitochondrial4.6e-8789.84Show/hide
Query:  MLAVQRIRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLA QRIRSS + SSTIR LQLWNRGV V NHTL SSTASS  +GLLDLQEVETIL NVKADDV+VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAVQRIRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETPEDDSSQDLDKALVKIRRKNNSKKPAQKVLNK
        VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDE ARTYYNLESLWS +TP+DDSSQ+LD+ALVKIRRKNNSKKPAQKVLNK
Subjt:  VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETPEDDSSQDLDKALVKIRRKNNSKKPAQKVLNK

A0A6J1KB66 protein Iojap-related, mitochondrial7.8e-8791.26Show/hide
Query:  MLAVQRIRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLA QRIRSS + SSTIR LQLWNRGV V NHTL SSTASS N+GLLDLQEVETIL NVKADDV+VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAVQRIRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETPEDDSSQDLDKALVKIRRKNNSKKPAQK
        VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWST+TP+DDSSQ+LD+ALVKIRRKNNSKKPAQK
Subjt:  VKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETPEDDSSQDLDKALVKIRRKNNSKKPAQK

SwissProt top hitse value%identityAlignment
P0AAT6 Ribosomal silencing factor RsfS3.3e-1036.08Show/hide
Query:  LTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWS
        + ++K  D+  + V+      D M+  TG S+ HV +IA  ++    Q+ + A  L L  VEG+    WIV+D G V+VH + E++R  Y LE LWS
Subjt:  LTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWS

P0AAT7 Ribosomal silencing factor RsfS3.3e-1036.08Show/hide
Query:  LTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWS
        + ++K  D+  + V+      D M+  TG S+ HV +IA  ++    Q+ + A  L L  VEG+    WIV+D G V+VH + E++R  Y LE LWS
Subjt:  LTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWS

P0AAT8 Ribosomal silencing factor RsfS3.3e-1036.08Show/hide
Query:  LTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWS
        + ++K  D+  + V+      D M+  TG S+ HV +IA  ++    Q+ + A  L L  VEG+    WIV+D G V+VH + E++R  Y LE LWS
Subjt:  LTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWS

Q02SH2 Ribosomal silencing factor RsfS8.8e-1138.54Show/hide
Query:  LTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLW
        L ++KA D+  + VR      DYMV A G S+  VK++A  ++   K K+ G + L     EG E G+W ++D G VVVH +    R +Y+LE LW
Subjt:  LTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLW

Q9CAF9 Protein Iojap-related, mitochondrial1.9e-4253.63Show/hide
Query:  IRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQK
        +RS  S     +S +L    +   + +  SS   S+   +L L EVE IL +VKAD+V VIP    C WAD+ V ATGRS WH++NIAQAL+Y+ KQKQK
Subjt:  IRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQK

Query:  GARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETP-EDDSSQDLDKALVKIRRKNNSKKPAQKV
        GA+ ++LPSV+G  + KWIVID GK VVHALDEKAR Y+NLESLWS E+   D S QDL    VK+R KNNSK+   KV
Subjt:  GARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETP-EDDSSQDLDKALVKIRRKNNSKKPAQKV

Arabidopsis top hitse value%identityAlignment
AT1G67620.1 Lojap-related protein1.4e-4353.63Show/hide
Query:  IRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQK
        +RS  S     +S +L    +   + +  SS   S+   +L L EVE IL +VKAD+V VIP    C WAD+ V ATGRS WH++NIAQAL+Y+ KQKQK
Subjt:  IRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQK

Query:  GARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETP-EDDSSQDLDKALVKIRRKNNSKKPAQKV
        GA+ ++LPSV+G  + KWIVID GK VVHALDEKAR Y+NLESLWS E+   D S QDL    VK+R KNNSK+   KV
Subjt:  GARQLVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETP-EDDSSQDLDKALVKIRRKNNSKKPAQKV

AT3G12930.1 Lojap-related protein1.8e-0627.82Show/hide
Query:  PSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQ-KGARQLVLPSVEGQEDGKWIVIDSGKVV
        P++      + L    E+  + ++VKA D+KV+ V+    W  + + AT  S   +  I   +    ++K  K A   V P+        W ++D G VV
Subjt:  PSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQ-KGARQLVLPSVEGQEDGKWIVIDSGKVV

Query:  VHALDEKARTYYNLESLWST----ETPEDDSSQ
        +H      RT+YNLE  +      E P +D SQ
Subjt:  VHALDEKARTYYNLESLWST----ETPEDDSSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGCGGTGCAAAGAATTCGATCTTCATTTTCTTTCTCTTCCACGATTCGTTCTCTTCAACTATGGAATAGAGGTGTTGTTGTTCACAATCATACTCTACCTTCTTC
CACCGCTAGCTCCAGCAACAAAGGTTTGCTTGATCTTCAGGAGGTCGAGACGATTCTGACTAACGTGAAGGCAGACGATGTGAAAGTGATACCAGTCCGCAAAGACTGTG
ATTGGGCTGATTACATGGTGTTTGCCACTGGTAGGTCTACCTGGCATGTTAAGAACATTGCTCAAGCCCTAATTTACAAGGTCAAGCAAAAGCAGAAAGGAGCTAGACAG
TTAGTACTTCCCAGTGTGGAAGGGCAAGAAGACGGAAAGTGGATTGTCATCGACTCTGGTAAAGTAGTTGTTCACGCCCTTGATGAGAAGGCCAGAACTTATTACAATCT
TGAGAGCCTTTGGTCCACTGAGACACCGGAAGATGATTCTTCTCAGGATTTGGACAAAGCTTTAGTGAAGATACGCCGGAAGAACAACTCCAAGAAACCAGCACAAAAGG
TTCTTAACAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGCGGTGCAAAGAATTCGATCTTCATTTTCTTTCTCTTCCACGATTCGTTCTCTTCAACTATGGAATAGAGGTGTTGTTGTTCACAATCATACTCTACCTTCTTC
CACCGCTAGCTCCAGCAACAAAGGTTTGCTTGATCTTCAGGAGGTCGAGACGATTCTGACTAACGTGAAGGCAGACGATGTGAAAGTGATACCAGTCCGCAAAGACTGTG
ATTGGGCTGATTACATGGTGTTTGCCACTGGTAGGTCTACCTGGCATGTTAAGAACATTGCTCAAGCCCTAATTTACAAGGTCAAGCAAAAGCAGAAAGGAGCTAGACAG
TTAGTACTTCCCAGTGTGGAAGGGCAAGAAGACGGAAAGTGGATTGTCATCGACTCTGGTAAAGTAGTTGTTCACGCCCTTGATGAGAAGGCCAGAACTTATTACAATCT
TGAGAGCCTTTGGTCCACTGAGACACCGGAAGATGATTCTTCTCAGGATTTGGACAAAGCTTTAGTGAAGATACGCCGGAAGAACAACTCCAAGAAACCAGCACAAAAGG
TTCTTAACAAGTGA
Protein sequenceShow/hide protein sequence
MLAVQRIRSSFSFSSTIRSLQLWNRGVVVHNHTLPSSTASSSNKGLLDLQEVETILTNVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGARQ
LVLPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTETPEDDSSQDLDKALVKIRRKNNSKKPAQKVLNK