CuGenDBv2

Gene ID	Tan0016284
Organism	Trichosanthes anguina (Snake gourd v1)
Description	ORF43m
Genome location	LG07:13813508..13816180
RNA-Seq Expression	Tan0016284
Synteny	Tan0016284
Gene Ontology terms	GO:0006101 - citrate metabolic process (biological process) GO:0009507 - chloroplast (cellular component) GO:0004108 - citrate (Si)-synthase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

ERM97427.1 hypothetical protein AMTR_s02909p00006680 [Amborella trichopoda]

3.2e-24

90.48

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Query:  VMNIAGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP
        V+ + GSLRVPSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP
Subjt:  VMNIAGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP

KAF4348549.1 hypothetical protein F8388_000228 [Cannabis sativa]

3.2e-24

90.48

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Query:  VMNIAGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP
        V+ + GSLRVPSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP
Subjt:  VMNIAGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP

KAF4360944.1 hypothetical protein G4B88_015419 [Cannabis sativa]

3.2e-24

90.48

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Query:  VMNIAGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP
        V+ + GSLRVPSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP
Subjt:  VMNIAGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP

KAF4361765.1 hypothetical protein G4B88_012073 [Cannabis sativa]

3.2e-24

90.48

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Query:  VMNIAGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP
        V+ + GSLRVPSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP
Subjt:  VMNIAGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP

TYK06708.1 hypothetical protein E5676_scaffold13G00090 [Cucumis melo var. makuwa]

3.2e-24

90.48

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Query:  VMNIAGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP
        V+ + GSLRVPSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP
Subjt:  VMNIAGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP

TrEMBL top hits

e value

%identity

Alignment

A0A5D3C6C5 Uncharacterized protein

1.6e-24

90.48

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Query:  VMNIAGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP
        V+ + GSLRVPSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP
Subjt:  VMNIAGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP

A0A6B9QF48 ORF43m

1.6e-24

90.48

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Query:  VMNIAGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP
        V+ + GSLRVPSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP
Subjt:  VMNIAGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP

A0A6B9QFK3 ORF43m

1.6e-24

90.48

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Query:  VMNIAGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP
        V+ + GSLRVPSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP
Subjt:  VMNIAGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP

A0A6B9QGL2 ORF43m

1.6e-24

90.48

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Query:  VMNIAGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP
        V+ + GSLRVPSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP
Subjt:  VMNIAGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP

A0A7J6ETR9 Citrate synthase

1.6e-24

90.48

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Query:  VMNIAGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP
        V+ + GSLRVPSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP
Subjt:  VMNIAGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCATGTAGTAACAAACAACACAGTCAGTACAATAAGGGGAAGACAAGCAAAAGGGAAGCATACGAAAACCAAGAGAGGGGTCATGAATATCGCCGGCTCTCTTAGGGT
TCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAGCAGCTTGATGCACGAGATCCCTTCAACCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAAT
CCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCTAA

mRNA sequence

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Protein sequence

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MHVVTNNTVSTIRGRQAKGKHTKTKRGVMNIAGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSP

Tan0016284 (gene) of Snake gourd v1 genome