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Tan0016289 (gene) of Snake gourd v1 genome

Gene IDTan0016289
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionmini zinc finger
Genome locationLG09:71530229..71531272
RNA-Seq ExpressionTan0016289
SyntenyTan0016289
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006456 - ZF-HD homeobox protein, Cys/His-rich dimerisation domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023191.1 Mini zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]6.0e-4291.49Show/hide
Query:  MKKRLVVMKKSDGSSGR-NRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSDH
        MKKR+VV+KKSDG  GR NRSGSGSV+RYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL+CAACGCHRNFHRREVDAEVVFEYSPPNSDH
Subjt:  MKKRLVVMKKSDGSSGR-NRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSDH

XP_022135253.1 mini zinc finger protein 3-like [Momordica charantia]7.9e-4291.4Show/hide
Query:  MKKRLVVMKKSDGSSGRNRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSDH
        MKKRLVV+KKSDGS GRNRSGSGSV+RYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEAL CAAC CHRNFHRREVD+EVVFEYSPPNS +
Subjt:  MKKRLVVMKKSDGSSGRNRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSDH

XP_022921765.1 mini zinc finger protein 3-like [Cucurbita moschata]1.6e-4292.55Show/hide
Query:  MKKRLVVMKKSDGSSGR-NRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSDH
        MKKR+VV+KKSDGS GR NRSGSGSV+RYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL+CAACGCHRNFHRREVDAEVVFEYSPPNSDH
Subjt:  MKKRLVVMKKSDGSSGR-NRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSDH

XP_022987207.1 mini zinc finger protein 3-like [Cucurbita maxima]3.5e-4291.49Show/hide
Query:  MKKRLVVMKKSDGSSGR-NRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSDH
        MKKR+VV+KKSDGS GR NRSGSGSV+RYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL+CAACGCHRNFHRR+VDAEVVFEYSPPNSDH
Subjt:  MKKRLVVMKKSDGSSGR-NRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSDH

XP_038880256.1 mini zinc finger protein 3 [Benincasa hispida]4.6e-4292.63Show/hide
Query:  MKKRLVVMKKSDGSSGR---NRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSD
        MKKRLVV+KKSDGSSGR   NRS SGSV+RYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNS+
Subjt:  MKKRLVVMKKSDGSSGR---NRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSD

TrEMBL top hitse value%identityAlignment
A0A0A0LSA6 ZF-HD dimerization-type domain-containing protein1.0e-3987.37Show/hide
Query:  MKKRLVVMKKSDGSSGRNR---SGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSD
        MKKRLVV++KSDGS+GR     S SGS +RYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNS+
Subjt:  MKKRLVVMKKSDGSSGRNR---SGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSD

A0A5A7UWS7 Mini zinc finger protein 3-like1.4e-3986.46Show/hide
Query:  MKKRLVVMKKSDGSSGRNR----SGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSD
        MKKRLVV+KKSDGS+GR      + SGS +RYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNS+
Subjt:  MKKRLVVMKKSDGSSGRNR----SGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSD

A0A6J1C4B2 mini zinc finger protein 3-like3.8e-4291.4Show/hide
Query:  MKKRLVVMKKSDGSSGRNRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSDH
        MKKRLVV+KKSDGS GRNRSGSGSV+RYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEAL CAAC CHRNFHRREVD+EVVFEYSPPNS +
Subjt:  MKKRLVVMKKSDGSSGRNRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSDH

A0A6J1E6Q9 mini zinc finger protein 3-like7.7e-4392.55Show/hide
Query:  MKKRLVVMKKSDGSSGR-NRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSDH
        MKKR+VV+KKSDGS GR NRSGSGSV+RYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL+CAACGCHRNFHRREVDAEVVFEYSPPNSDH
Subjt:  MKKRLVVMKKSDGSSGR-NRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSDH

A0A6J1J9R5 mini zinc finger protein 3-like1.7e-4291.49Show/hide
Query:  MKKRLVVMKKSDGSSGR-NRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSDH
        MKKR+VV+KKSDGS GR NRSGSGSV+RYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL+CAACGCHRNFHRR+VDAEVVFEYSPPNSDH
Subjt:  MKKRLVVMKKSDGSSGR-NRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSDH

SwissProt top hitse value%identityAlignment
B8BIU8 Mini zinc finger protein 15.2e-2064.18Show/hide
Query:  SSGRNRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDA
        ++   R  +  V+RY ECQ+NHAA +GG AVDGCREFMA G +GT  AL CAACGCHR+FHRREV+A
Subjt:  SSGRNRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDA

Q2Q493 Mini zinc finger protein 32.6e-2765.59Show/hide
Query:  MKKRLVVMKKSDGSSGRNRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSDH
        MKKR VV+K+    S    + S S +RY ECQKNHAA +GG+AVDGCREFMA G D   +AL CAACGCHRNFHRREVD EVV EYSPPN+++
Subjt:  MKKRLVVMKKSDGSSGRNRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSDH

Q2RB28 Mini zinc finger protein 15.2e-2064.18Show/hide
Query:  SSGRNRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDA
        ++   R  +  V+RY ECQ+NHAA +GG AVDGCREFMA G +GT  AL CAACGCHR+FHRREV+A
Subjt:  SSGRNRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDA

Q9CA51 Mini zinc finger protein 12.0e-2759.41Show/hide
Query:  MKKRLVVMKKSDGSSGRNRSGSG----------SVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPN
        MKKR +V+K+   +S  + S +           S +RY ECQKNHAA +GG+AVDGCREFMA G +GT +AL CAACGCHRNFHR+EVD EVV EYSPPN
Subjt:  MKKRLVVMKKSDGSSGRNRSGSG----------SVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPN

Query:  S
        +
Subjt:  S

Q9LJW5 Mini zinc finger protein 21.7e-2355.67Show/hide
Query:  MKKRLVVMKKSDGSSGRNRSGSGS-----VIRYAECQKNHAAKLGGFAVDGCREFMA-RGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNS
        M+KR VV++++        S + S      +RY ECQKNHAA +GG+AVDGCREFMA RGE+GT  AL CAACGCHR+FHRRE++ EVV + + P S
Subjt:  MKKRLVVMKKSDGSSGRNRSGSGS-----VIRYAECQKNHAAKLGGFAVDGCREFMA-RGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNS

Arabidopsis top hitse value%identityAlignment
AT1G14440.1 homeobox protein 312.0e-1957.97Show/hide
Query:  VIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSDH
        +I+Y EC KNHAA +GG A DGC EFM  GEDG+ EAL C+AC CHRNFHR+EV+ E+      P   H
Subjt:  VIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSDH

AT1G18835.1 mini zinc finger1.8e-2865.59Show/hide
Query:  MKKRLVVMKKSDGSSGRNRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSDH
        MKKR VV+K+    S    + S S +RY ECQKNHAA +GG+AVDGCREFMA G D   +AL CAACGCHRNFHRREVD EVV EYSPPN+++
Subjt:  MKKRLVVMKKSDGSSGRNRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSDH

AT1G74660.1 mini zinc finger 11.4e-2859.41Show/hide
Query:  MKKRLVVMKKSDGSSGRNRSGSG----------SVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPN
        MKKR +V+K+   +S  + S +           S +RY ECQKNHAA +GG+AVDGCREFMA G +GT +AL CAACGCHRNFHR+EVD EVV EYSPPN
Subjt:  MKKRLVVMKKSDGSSGRNRSGSG----------SVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPN

Query:  S
        +
Subjt:  S

AT3G28917.1 mini zinc finger 21.2e-2455.67Show/hide
Query:  MKKRLVVMKKSDGSSGRNRSGSGS-----VIRYAECQKNHAAKLGGFAVDGCREFMA-RGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNS
        M+KR VV++++        S + S      +RY ECQKNHAA +GG+AVDGCREFMA RGE+GT  AL CAACGCHR+FHRRE++ EVV + + P S
Subjt:  MKKRLVVMKKSDGSSGRNRSGSGS-----VIRYAECQKNHAAKLGGFAVDGCREFMA-RGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNS

AT4G24660.1 homeobox protein 226.3e-2164.79Show/hide
Query:  SDGSSGRNRS-GSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDA
        S G  G  RS G G+ IRY EC KNHA  +GG AVDGC EFM  GEDGT +AL CAACGCHRNFHR+E ++
Subjt:  SDGSSGRNRS-GSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAAGGCTGGTGGTGATGAAGAAATCTGATGGCTCTAGCGGCCGAAACCGCTCCGGTTCGGGTTCGGTCATCCGCTATGCCGAGTGCCAGAAGAACCACGCCGC
GAAGCTCGGCGGGTTCGCCGTGGATGGCTGCCGGGAGTTCATGGCCAGAGGAGAGGATGGGACTGAGGAGGCTCTCAATTGTGCTGCTTGTGGCTGCCACAGGAATTTTC
ACAGAAGGGAGGTTGATGCTGAAGTTGTTTTTGAGTATTCTCCTCCAAACTCCGATCATTGA
mRNA sequenceShow/hide mRNA sequence
GAATAACCCACTTCTCCTACCTTTTAAATTAGTAGTGAAGAAGGTTGTGGAAAGTTGTGTAGGAGTGTCACTGGCTTTTGACAAGATTAAATTTGGTAGAGGGTCAATCT
TTGCCTTCCAATCCAACCAAAAGGATTTGGAAAATGTTGCCAAAATAAGCTTGTGTTTCTGTTCTATCTTCCATTAATTAATTGCTTCTGTGTGCACTGCCCACTAGCTA
GCCCATATAAATAACTCTCTTAGCTTAGGGTTAGGGTTATATTAGGCAGTTGCTTCAAGCACATCAACAAGAGATCATTTAACCCACAAAGCAAAAAGAAAAAAAAAAAA
AAAGCTATCTCCTTTCCTTTTAACTTTCCCCTTACACGTTTGGAATTTGATCCATACCAAAAAGAAACCCCAAATTCAGCCAAGATTGGTGGGTTTAGAGCTCCGTGTGA
TTCCAAAACCATGAAGAAAAGGCTGGTGGTGATGAAGAAATCTGATGGCTCTAGCGGCCGAAACCGCTCCGGTTCGGGTTCGGTCATCCGCTATGCCGAGTGCCAGAAGA
ACCACGCCGCGAAGCTCGGCGGGTTCGCCGTGGATGGCTGCCGGGAGTTCATGGCCAGAGGAGAGGATGGGACTGAGGAGGCTCTCAATTGTGCTGCTTGTGGCTGCCAC
AGGAATTTTCACAGAAGGGAGGTTGATGCTGAAGTTGTTTTTGAGTATTCTCCTCCAAACTCCGATCATTGAAGAGATCATCATCAAAATGCAAAATTGACAAAAAGGGT
TTGTTACTATATATATATATATGATATCTATATGGTCTGGTTTTGATTTTTAATTTGCATTTTATCATGTAAATCTGATCAGTAACAAACATGGATTATTGGGGAGAAAA
AATACCCAAAAAAAAAAAAAAAACTATCAAATCTCAGTTTGTTCTTGTTTTTGTTTTTCTTCAAGAATATTGATCGAGGTTTTTTTTTTCTTTCTTCTTCTTTATCATAT
GACCCAAATCCTAAAGTTTCTCTCTTTATCCCTCTATTGAGTTTGTCAAGAAGC
Protein sequenceShow/hide protein sequence
MKKRLVVMKKSDGSSGRNRSGSGSVIRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSDH