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Tan0016307 (gene) of Snake gourd v1 genome

Gene IDTan0016307
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG07:51007842..51008345
RNA-Seq ExpressionTan0016307
SyntenyTan0016307
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]1.7e-3164.17Show/hide
Query:  MVSAREIMDYLQNLSRQPSEQIRHESIKYVYNARMKEGTSVREHVLDLIVHFNVVEMNEAIIDEQIQVFFILESPPKSFLPFRRNAELNKKECNLTSLLN
        M++AREIMD LQ +  Q S QI+H+++KY+YNARM EG SVREHVL+++VHFNV EMN A+IDE  QV FILES P+SFL FR NA +NK    LT+LLN
Subjt:  MVSAREIMDYLQNLSRQPSEQIRHESIKYVYNARMKEGTSVREHVLDLIVHFNVVEMNEAIIDEQIQVFFILESPPKSFLPFRRNAELNKKECNLTSLLN

Query:  ELQTFESLIKNKGQAMEREI
        ELQTFESL+K KGQ  E  +
Subjt:  ELQTFESLIKNKGQAMEREI
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]1.7e-3164.17Show/hide
Query:  MVSAREIMDYLQNLSRQPSEQIRHESIKYVYNARMKEGTSVREHVLDLIVHFNVVEMNEAIIDEQIQVFFILESPPKSFLPFRRNAELNKKECNLTSLLN
        M++AREIMD LQ +  Q S QI+H+++KY+YNARM EG SVREHVL+++VHFNV EMN A+IDE  QV FILES P+SFL FR NA +NK    LT+LLN
Subjt:  MVSAREIMDYLQNLSRQPSEQIRHESIKYVYNARMKEGTSVREHVLDLIVHFNVVEMNEAIIDEQIQVFFILESPPKSFLPFRRNAELNKKECNLTSLLN

Query:  ELQTFESLIKNKGQAMEREI
        ELQTFESL+K KGQ  E  +
Subjt:  ELQTFESLIKNKGQAMEREI
KAA0054432.1 gag/pol protein [Cucumis melo var. makuwa]7.8e-3265Show/hide
Query:  MVSAREIMDYLQNLSRQPSEQIRHESIKYVYNARMKEGTSVREHVLDLIVHFNVVEMNEAIIDEQIQVFFILESPPKSFLPFRRNAELNKKECNLTSLLN
        M++AREIMD LQ +  Q S QI+H+++KY+YNARM EG SVREHVL+++VHFNVVEMN A+IDE  QV FILES P+SFL FR NA +NK    LT LLN
Subjt:  MVSAREIMDYLQNLSRQPSEQIRHESIKYVYNARMKEGTSVREHVLDLIVHFNVVEMNEAIIDEQIQVFFILESPPKSFLPFRRNAELNKKECNLTSLLN

Query:  ELQTFESLIKNKGQAMEREI
        ELQTFESL+K KGQ  E  +
Subjt:  ELQTFESLIKNKGQAMEREI
KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]1.7e-3164.17Show/hide
Query:  MVSAREIMDYLQNLSRQPSEQIRHESIKYVYNARMKEGTSVREHVLDLIVHFNVVEMNEAIIDEQIQVFFILESPPKSFLPFRRNAELNKKECNLTSLLN
        M++AREIMD LQ +  Q S QI+H+++KY+YNARM EG SVREHVL+++VHFNV EMN A+IDE  QV FILES P+SFL FR NA +NK    LT+LLN
Subjt:  MVSAREIMDYLQNLSRQPSEQIRHESIKYVYNARMKEGTSVREHVLDLIVHFNVVEMNEAIIDEQIQVFFILESPPKSFLPFRRNAELNKKECNLTSLLN

Query:  ELQTFESLIKNKGQAMEREI
        ELQTFESL+K KGQ  E  +
Subjt:  ELQTFESLIKNKGQAMEREI
TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]1.7e-3164.17Show/hide
Query:  MVSAREIMDYLQNLSRQPSEQIRHESIKYVYNARMKEGTSVREHVLDLIVHFNVVEMNEAIIDEQIQVFFILESPPKSFLPFRRNAELNKKECNLTSLLN
        M++AREIMD LQ +  Q S QI+H+++KY+YNARM EG SVREHVL+++VHFNV EMN A+IDE  QV FILES P+SFL FR NA +NK    LT+LLN
Subjt:  MVSAREIMDYLQNLSRQPSEQIRHESIKYVYNARMKEGTSVREHVLDLIVHFNVVEMNEAIIDEQIQVFFILESPPKSFLPFRRNAELNKKECNLTSLLN

Query:  ELQTFESLIKNKGQAMEREI
        ELQTFESL+K KGQ  E  +
Subjt:  ELQTFESLIKNKGQAMEREI
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein8.4e-3264.17Show/hide
Query:  MVSAREIMDYLQNLSRQPSEQIRHESIKYVYNARMKEGTSVREHVLDLIVHFNVVEMNEAIIDEQIQVFFILESPPKSFLPFRRNAELNKKECNLTSLLN
        M++AREIMD LQ +  Q S QI+H+++KY+YNARM EG SVREHVL+++VHFNV EMN A+IDE  QV FILES P+SFL FR NA +NK    LT+LLN
Subjt:  MVSAREIMDYLQNLSRQPSEQIRHESIKYVYNARMKEGTSVREHVLDLIVHFNVVEMNEAIIDEQIQVFFILESPPKSFLPFRRNAELNKKECNLTSLLN

Query:  ELQTFESLIKNKGQAMEREI
        ELQTFESL+K KGQ  E  +
Subjt:  ELQTFESLIKNKGQAMEREI
A0A5A7TU93 Gag/pol protein8.4e-3264.17Show/hide
Query:  MVSAREIMDYLQNLSRQPSEQIRHESIKYVYNARMKEGTSVREHVLDLIVHFNVVEMNEAIIDEQIQVFFILESPPKSFLPFRRNAELNKKECNLTSLLN
        M++AREIMD LQ +  Q S QI+H+++KY+YNARM EG SVREHVL+++VHFNV EMN A+IDE  QV FILES P+SFL FR NA +NK    LT+LLN
Subjt:  MVSAREIMDYLQNLSRQPSEQIRHESIKYVYNARMKEGTSVREHVLDLIVHFNVVEMNEAIIDEQIQVFFILESPPKSFLPFRRNAELNKKECNLTSLLN

Query:  ELQTFESLIKNKGQAMEREI
        ELQTFESL+K KGQ  E  +
Subjt:  ELQTFESLIKNKGQAMEREI
A0A5A7UF91 Gag/pol protein3.8e-3265Show/hide
Query:  MVSAREIMDYLQNLSRQPSEQIRHESIKYVYNARMKEGTSVREHVLDLIVHFNVVEMNEAIIDEQIQVFFILESPPKSFLPFRRNAELNKKECNLTSLLN
        M++AREIMD LQ +  Q S QI+H+++KY+YNARM EG SVREHVL+++VHFNVVEMN A+IDE  QV FILES P+SFL FR NA +NK    LT LLN
Subjt:  MVSAREIMDYLQNLSRQPSEQIRHESIKYVYNARMKEGTSVREHVLDLIVHFNVVEMNEAIIDEQIQVFFILESPPKSFLPFRRNAELNKKECNLTSLLN

Query:  ELQTFESLIKNKGQAMEREI
        ELQTFESL+K KGQ  E  +
Subjt:  ELQTFESLIKNKGQAMEREI
A0A5A7V4M1 Gag/pol protein8.4e-3264.17Show/hide
Query:  MVSAREIMDYLQNLSRQPSEQIRHESIKYVYNARMKEGTSVREHVLDLIVHFNVVEMNEAIIDEQIQVFFILESPPKSFLPFRRNAELNKKECNLTSLLN
        M++AREIMD LQ +  Q S QI+H+++KY+YNARM EG SVREHVL+++VHFNV EMN A+IDE  QV FILES P+SFL FR NA +NK    LT+LLN
Subjt:  MVSAREIMDYLQNLSRQPSEQIRHESIKYVYNARMKEGTSVREHVLDLIVHFNVVEMNEAIIDEQIQVFFILESPPKSFLPFRRNAELNKKECNLTSLLN

Query:  ELQTFESLIKNKGQAMEREI
        ELQTFESL+K KGQ  E  +
Subjt:  ELQTFESLIKNKGQAMEREI
A0A5D3CPJ6 Gag/pol protein8.4e-3264.17Show/hide
Query:  MVSAREIMDYLQNLSRQPSEQIRHESIKYVYNARMKEGTSVREHVLDLIVHFNVVEMNEAIIDEQIQVFFILESPPKSFLPFRRNAELNKKECNLTSLLN
        M++AREIMD LQ +  Q S QI+H+++KY+YNARM EG SVREHVL+++VHFNV EMN A+IDE  QV FILES P+SFL FR NA +NK    LT+LLN
Subjt:  MVSAREIMDYLQNLSRQPSEQIRHESIKYVYNARMKEGTSVREHVLDLIVHFNVVEMNEAIIDEQIQVFFILESPPKSFLPFRRNAELNKKECNLTSLLN

Query:  ELQTFESLIKNKGQAMEREI
        ELQTFESL+K KGQ  E  +
Subjt:  ELQTFESLIKNKGQAMEREI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTCAGCTCGTGAGATCATGGACTATCTGCAAAATTTGTCTAGACAACCGTCTGAACAAATTCGGCACGAATCCATCAAATATGTTTATAACGCGCGCATGAAGGA
GGGAACTTCAGTGAGAGAACATGTTCTCGATCTTATAGTTCACTTCAACGTGGTCGAAATGAACGAAGCGATCATAGATGAGCAAATTCAGGTATTCTTCATCCTAGAAT
CTCCTCCGAAGAGTTTCCTGCCATTCCGTAGAAATGCGGAGTTGAACAAAAAGGAGTGTAACCTGACTTCCCTCCTAAATGAACTACAAACTTTCGAGTCTCTTATTAAG
AATAAGGGGCAGGCTATGGAGAGGGAAATTCGTTTGCCCATTCCAAAAGGTTCCAGAAGGGTTCATCCTCTGGGACTAAGCCCTGTGGTTCAACTTGGAAGAAGAGGAAA
GGAGGAAAAGGGAAAGCTTCTGCCACTGCATATATTGAGCTCAAAGAGAAGAATGGTAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCTCAGCTCGTGAGATCATGGACTATCTGCAAAATTTGTCTAGACAACCGTCTGAACAAATTCGGCACGAATCCATCAAATATGTTTATAACGCGCGCATGAAGGA
GGGAACTTCAGTGAGAGAACATGTTCTCGATCTTATAGTTCACTTCAACGTGGTCGAAATGAACGAAGCGATCATAGATGAGCAAATTCAGGTATTCTTCATCCTAGAAT
CTCCTCCGAAGAGTTTCCTGCCATTCCGTAGAAATGCGGAGTTGAACAAAAAGGAGTGTAACCTGACTTCCCTCCTAAATGAACTACAAACTTTCGAGTCTCTTATTAAG
AATAAGGGGCAGGCTATGGAGAGGGAAATTCGTTTGCCCATTCCAAAAGGTTCCAGAAGGGTTCATCCTCTGGGACTAAGCCCTGTGGTTCAACTTGGAAGAAGAGGAAA
GGAGGAAAAGGGAAAGCTTCTGCCACTGCATATATTGAGCTCAAAGAGAAGAATGGTAAATTAG
Protein sequenceShow/hide protein sequence
MVSAREIMDYLQNLSRQPSEQIRHESIKYVYNARMKEGTSVREHVLDLIVHFNVVEMNEAIIDEQIQVFFILESPPKSFLPFRRNAELNKKECNLTSLLNELQTFESLIK
NKGQAMEREIRLPIPKGSRRVHPLGLSPVVQLGRRGKEEKGKLLPLHILSSKRRMVN