CuGenDBv2

Gene ID	Tan0016310
Organism	Trichosanthes anguina (Snake gourd v1)
Description	NADH dehydrogenase subunit 4L
Genome location	Contig00127:101555..102282
RNA-Seq Expression	Tan0016310
Synteny	Tan0016310
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0042773 - ATP synthesis coupled electron transport (biological process) GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0015078 - proton transmembrane transporter activity (molecular function) GO:0016651 - oxidoreductase activity, acting on NAD(P)H (molecular function)
InterPro domains	IPR001133 - NADH-ubiquinone oxidoreductase chain 4L/K IPR039428 - NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

YP_004849353.1 NADH dehydrogenase subunit 4L [Cucumis sativus]

1.4e-35

98.89

Show/hide

Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEF+NSIQG
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG

YP_009045755.1 NADH dehydrogenase subunit 4L [Batis maritima]

8.2e-36

100

Show/hide

Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG

YP_009153941.1 NADH dehydrogenase subunit 4L [Gossypium hirsutum]

4.1e-35

98.89

Show/hide

Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVS DDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG

YP_009498153.1 NADH dehydrogenase subunit 4L [Senna tora]

8.2e-36

100

Show/hide

Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG

YP_009504857.1 Nad4L, partial [Senna occidentalis]

8.2e-36

100

Show/hide

Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG

TrEMBL top hits

e value

%identity

Alignment

A0A068BHL8 NADH dehydrogenase subunit 4L

4.0e-36

100

Show/hide

Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG

A0A2Z4HGN9 Nad4L (Fragment)

4.0e-36

100

Show/hide

Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG

A0A2Z4HGP5 NADH-ubiquinone oxidoreductase chain 4L

4.0e-36

100

Show/hide

Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG

A0A5J6NGJ1 NADH dehydrogenase subunit 4L

4.0e-36

100

Show/hide

Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG

A0A7D6BYE9 NADH dehydrogenase subunit 4L

4.0e-36

100

Show/hide

Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG

SwissProt top hits

e value

%identity

Alignment

B6ISX1 NADH-quinone oxidoreductase subunit K

6.8e-17

Show/hide

Query:  LGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
        LG  GIL+NRRN+ ++ M IE MLLAVN N + FSV  +D+ GQ F   + TVAAAE+AIGLAI V+ FR RGTIAVE IN ++G
Subjt:  LGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG

P26851 NADH-ubiquinone oxidoreductase chain 4L

5.2e-25

75.56

Show/hide

Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
        MI+ +LGI GI LNR+NI IM M IE MLLAVN NFLVFSV  DDMMGQ FA  V TVAAAESAIGLAI VITFR+RGTIAVEFIN ++G
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG

Q04614 NADH-ubiquinone oxidoreductase chain 4L

2.4e-30

88.89

Show/hide

Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
        MII ILGI GILLNRRNI IM M IE MLLAVNSNFLVFSVS DDMMGQ FA LV TVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG

Q37627 NADH-ubiquinone oxidoreductase chain 4L

4.1e-22

66.67

Show/hide

Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
        MI+ +LGI GI LNR+NI +M M IE MLLAVN NFL+FSV  DD +GQ FA L+ TVAAAESAIGLA+ V+ +R+RGTIAVEFIN ++G
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG

Q6N5N4 NADH-quinone oxidoreductase subunit K 1

1.2e-16

57.3

Show/hide

Query:  IISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
        ++  LG  GI LNR+N+ I+ M IE MLLAVN N + FS+  +D++GQ FA LV TVAAAE+AIGLA+ V+ FR RGTIAV+ IN ++G
Subjt:  IISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG

Arabidopsis top hits

e value

%identity

Alignment

ATCG01070.1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L

8.8e-04

38.75

Show/hide

Query:  ILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFS--VSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAV
        ++G+ G L+  RN+    M +E +L AVN NF+ FS    +  + G+ F   V  +AAAE+AIGLAI    +R R +I +
Subjt:  ILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFS--VSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAV

ATMG00650.1 NADH dehydrogenase subunit 4L

3.8e-39

98.89

Show/hide

Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQ FASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATCATCTCTATTTTAGGTATTCGGGGAATCCTCCTTAATAGACGAAATATTCCTATTATGTCAATGCCAATTGAATCAATGTTATTAGCTGTGAATTCGAACTTTTT
GGTATTTTCCGTTTCTTCGGATGATATGATGGGTCAATCATTTGCTTCATTGGTTCCAACGGTGGCAGCAGCGGAATCCGCTATTGGGTTAGCCATTTTCGTTATTACTT
TCCGAGTCCGAGGGACTATTGCTGTAGAATTTATTAATAGCATTCAAGGTTAA

mRNA sequence

Show/hide mRNA sequence

TTTTCTTTAAGTAAGAGATTGGCCATCGCCCAAAGGCGGCTCATTGAGCCGGTCATCGGTTGCTAAGAGCCTTTCCTCACTTTAGAAGAAAAGCCACTTGATTTTATTAT
TAGTAAGGGGACGAATATTCGTTGTATATCTATATTGGACTTTCGATTTTGCGTTGTTTTTTTTCAGTATATATAATCCAATGTTCAGTGAGATGACTTTCCTACTGACG
GAATCGCTTGAATTAGTTGAAGGAAAGGAGGTGGCTGGTCTCACTGGAGAGGAGAGTTTTGACAGCGAGGGAGGCAGTTCCGAAGCAAGTGTCAATCAGCCACATCCTAA
TTCTGACGTCCCTTCGAATCCTAACCGCGCTGGTCGTAATAGATCGACTTTCAAGTTATAACATTTGAATTTCTCTGACATTCTACGTTCCCGAAACGGATCCTATCAAA
TATTTCACATTTTCGATGATCATCTCTATTTTAGGTATTCGGGGAATCCTCCTTAATAGACGAAATATTCCTATTATGTCAATGCCAATTGAATCAATGTTATTAGCTGT
GAATTCGAACTTTTTGGTATTTTCCGTTTCTTCGGATGATATGATGGGTCAATCATTTGCTTCATTGGTTCCAACGGTGGCAGCAGCGGAATCCGCTATTGGGTTAGCCA
TTTTCGTTATTACTTTCCGAGTCCGAGGGACTATTGCTGTAGAATTTATTAATAGCATTCAAGGTTAA

Protein sequence

Show/hide protein sequence

MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG

Tan0016310 (gene) of Snake gourd v1 genome