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Tan0016322 (gene) of Snake gourd v1 genome

Gene IDTan0016322
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCYSTM domain-containing protein
Genome locationLG01:106738219..106740339
RNA-Seq ExpressionTan0016322
SyntenyTan0016322
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain
IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3953656.1 hypothetical protein CMV_020922 [Castanea mollissima]4.5e-2175Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS++PA  YPPPST P  Y APPPAGYPT+DG  +SQ   P P ETKSRG+GFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

KAF3972548.1 hypothetical protein CMV_003960 [Castanea mollissima]1.6e-2176.39Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS++PA  YPPPST P  Y APPPAGYPT+DG  +SQ   P P ETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

KAG6591814.1 hypothetical protein SDJN03_14160, partial [Cucurbita argyrosperma subsp. sororia]2.7e-2993.06Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS QPA VYPPPST+PTSY+APPPAGYPTRDGGDFSQP APVPAETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

XP_022137938.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia]2.9e-2890.28Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSSAQPA VYPPPST P SY+APPPAGYPTRDGGDFSQP  PVPAETKSRGDGFWKGCCAA+CCCCVLDACF
Subjt:  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

XP_031739667.1 cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucumis sativus]6.1e-2690.54Show/hide
Query:  MSSAQPAGV-YPPP-STVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSSAQPAGV YPPP STVPTSYSAPPPAGYPTR+GGDFS    PVPAETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGV-YPPP-STVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

TrEMBL top hitse value%identityAlignment
A0A0A0L4C6 CYSTM domain-containing protein3.0e-2690.54Show/hide
Query:  MSSAQPAGV-YPPP-STVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSSAQPAGV YPPP STVPTSYSAPPPAGYPTR+GGDFS    PVPAETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGV-YPPP-STVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

A0A6J1CBQ4 cysteine-rich and transmembrane domain-containing protein WIH2-like1.4e-2890.28Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSSAQPA VYPPPST P SY+APPPAGYPTRDGGDFSQP  PVPAETKSRGDGFWKGCCAA+CCCCVLDACF
Subjt:  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

A0A7N2LG73 CYSTM domain-containing protein1.7e-2175Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS++PA  YPPPST P  Y APPPAGYPT+DG  +SQ   P P ETKSRGDGFWKGCCAALCCCCV+DACF
Subjt:  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

A0A7N2LJ98 CYSTM domain-containing protein1.4e-2073.61Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS++PA  YPPPST PT Y A PPAGYPT+DG  +SQ   P P ETKSRGDGFWKGCCAALCCCC LD CF
Subjt:  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

A0A7N2R3F7 CYSTM domain-containing protein9.9e-2278.08Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPTRDG-GDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS++PA  YPPPSTVP  Y APPPAGYPT+DG G F  P  P P ETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPTRDG-GDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05340.1 unknown protein4.5e-1155.88Show/hide
Query:  QPAGVYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        Q AG  PPP  + T  S PPP GYPT      S   A    ETKS+GDGF+KGC AA+CCCC LD CF
Subjt:  QPAGVYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

AT2G32190.1 unknown protein1.3e-1356.34Show/hide
Query:  SSAQPAGVYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        S  Q +G YP P      Y  PPP GYPT D       A   P ETKS+GDGF KGC AA+CCCCVLDACF
Subjt:  SSAQPAGVYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

AT2G32210.1 unknown protein1.7e-1356.34Show/hide
Query:  SSAQPAGVYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        S  Q +G YP P      Y APPP GYPT D    +  A     ETKS+GDGF KGC AA+CCCCVLDACF
Subjt:  SSAQPAGVYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

AT3G22235.1 BEST Arabidopsis thaliana protein match is: pathogen and circadian controlled 1 (TAIR:AT3G22231.1)1.5e-0956.25Show/hide
Query:  VYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        V  P  T    Y++PPP GYPTRD      PAA V  ET S+G    +GCCAA+CCCCVLDACF
Subjt:  VYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

AT3G22240.1 unknown protein3.6e-1665.62Show/hide
Query:  VYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        V  P  T    Y++PPP GYPTRD      PAA V  ETKS+GDGFWKGCCAA+CCCCVLDACF
Subjt:  VYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCGCTCAGCCTGCAGGTGTTTATCCTCCACCCTCCACCGTGCCAACCTCTTATTCAGCTCCGCCGCCGGCGGGGTATCCGACGAGAGACGGCGGCGACTTCTC
TCAACCGGCCGCTCCTGTTCCGGCTGAAACTAAGTCTAGAGGCGATGGCTTTTGGAAGGGCTGTTGTGCTGCATTGTGTTGCTGCTGTGTGTTGGATGCATGCTTCTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAGACAACAGAATTACTCAGATTTCTCTCTCTATTTCTCTACATAGAAATAAGCACCTACTCTTTTTGTCCTGACTTTTCCCTTTGAGATTCTCTCTCTCTCTCTCT
TCCGTTCACGCGGTTTCGCCGCCCCTGGTCGGACCCTCTCCCACACCACTCTCTCTGCCGCCTCCAAATCTCTCCCCTATATATATATATATATATATATATTATCACTC
TTTCCTTGAGTATATCAAACTTAAAATTACATAAATATTATTTCTGATTTCCCTTCTTTTCTCTCTTAAATTTTGTGAGATTTTATTTCAAGATGAGTTCCGCTCAGCCT
GCAGGTGTTTATCCTCCACCCTCCACCGTGCCAACCTCTTATTCAGCTCCGCCGCCGGCGGGGTATCCGACGAGAGACGGCGGCGACTTCTCTCAACCGGCCGCTCCTGT
TCCGGCTGAAACTAAGTCTAGAGGCGATGGCTTTTGGAAGGGCTGTTGTGCTGCATTGTGTTGCTGCTGTGTGTTGGATGCATGCTTCTAATCACCAGAAGTGAAGACAA
CAAATTCTTAGAGATGATCGATCAGCATATTATATATATGTCATTTTAATTAGTGTTTTTTTTTTCTTTTTTGTGAATTTTTGGATTATTAATTAAATAATGTTGTAATA
ATAAATTAGGTGTTCAAGACTGGGAATCATGCTGATGAAACCATATTGACTTGTGTGATCATATCATATCTTTTTTATAATTATTATAATTTTTTCTTTGTGTAGTAGTT
GTGAGTTGGTTTGTTTCCATATATCATCATGACACGTGGCGAATTATTTTGTTCACACGTGTGCATGGAGAGATAAGGATGAAAGAGAGAATTCGAATTGGTTTTTTATT
TTTTTATTTTTTTGCTTGCTTATTCAACTTGGTTACGTATATTCCCTCCTTTTTTTATAATAAGGTCTCAACAAATGTATGGAATAGATTCATTTTCATGGAGGGAGATT
TGATATCTTAAAGTTCGAATATATAAAACAATCAATTACTAATTCTTATTCAAAGTTGGCAGATATATATTTAATAAA
Protein sequenceShow/hide protein sequence
MSSAQPAGVYPPPSTVPTSYSAPPPAGYPTRDGGDFSQPAAPVPAETKSRGDGFWKGCCAALCCCCVLDACF