CuGenDBv2

Gene ID	Tan0016331
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1
Genome location	LG01:23387536..23389608
RNA-Seq Expression	Tan0016331
Synteny	Tan0016331
Gene Ontology terms	NA
InterPro domains	IPR043459 - NFD6/NOXY2-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004147213.1 uncharacterized protein LOC101221008 isoform X1 [Cucumis sativus]

1.6e-35

92.63

Show/hide

Query:  MASACQRIASRISQSSFRT-IRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQAFLC
        MASACQRIASRISQSSFRT +RTNS AKS SSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQ  LC
Subjt:  MASACQRIASRISQSSFRT-IRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQAFLC

XP_008448835.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis melo]

1.3e-34

91.58

Show/hide

Query:  MASACQRIASRISQSSFRT-IRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQAFLC
        MASACQRIASRISQSSFRT +RTNS AKS SS FPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQ  LC
Subjt:  MASACQRIASRISQSSFRT-IRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQAFLC

XP_022154046.1 uncharacterized protein LOC111021400 isoform X1 [Momordica charantia]

2.1e-35

91.58

Show/hide

Query:  MASACQRIASRISQSSFR-TIRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQAFLC
        MASAC RIASRISQSSFR  +RT SP KSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ  LC
Subjt:  MASACQRIASRISQSSFR-TIRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQAFLC

XP_022154047.1 uncharacterized protein LOC111021400 isoform X2 [Momordica charantia]

1.3e-34

93.41

Show/hide

Query:  MASACQRIASRISQSSFR-TIRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASAC RIASRISQSSFR  +RT SP KSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACQRIASRISQSSFR-TIRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

XP_038903086.1 protein NONRESPONDING TO OXYLIPINS 2, mitochondrial isoform X1 [Benincasa hispida]

2.7e-35

90.53

Show/hide

Query:  MASACQRIASRISQSSFRT-IRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQAFLC
        MASACQRIASRISQSSFRT +RTN+ AKS SSPFPLP+KSTAPSVRRFSLARSPSELGC+QSLLPFHNAVAGARMISCLSTNSRSCRALSQ  LC
Subjt:  MASACQRIASRISQSSFRT-IRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQAFLC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L1I6 Uncharacterized protein

1.4e-42

65.78

Show/hide

Query:  MASACQRIASRISQSSFRT-IRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQAFLCI----
        MASACQRIASRISQSSFRT +RTNS AKS SSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQ F  +    
Subjt:  MASACQRIASRISQSSFRT-IRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQAFLCI----

Query:  --ICRLFLFLFCNCLSVSLCWYLLILVVFFVGVLFRKSCRLYMKHIISIVNMLERNRLE--------------MHLMVRETYLLFLK
          +C LF+ +F +  S  LC   ++  +            L + HIISIVNMLERNRLE              M LMVRETYLLFLK
Subjt:  --ICRLFLFLFCNCLSVSLCWYLLILVVFFVGVLFRKSCRLYMKHIISIVNMLERNRLE--------------MHLMVRETYLLFLK

A0A1S3BKM3 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1

6.4e-35

91.58

Show/hide

Query:  MASACQRIASRISQSSFRT-IRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQAFLC
        MASACQRIASRISQSSFRT +RTNS AKS SS FPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQ  LC
Subjt:  MASACQRIASRISQSSFRT-IRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQAFLC

A0A6J1DJ71 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3

6.4e-35

93.41

Show/hide

Query:  MASACQRIASRISQSSFR-TIRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASAC RIASRISQSSFR  +RT SP KSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACQRIASRISQSSFR-TIRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

A0A6J1DKL6 uncharacterized protein LOC111021400 isoform X2

6.4e-35

93.41

Show/hide

Query:  MASACQRIASRISQSSFR-TIRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASAC RIASRISQSSFR  +RT SP KSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACQRIASRISQSSFR-TIRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

A0A6J1DMJ3 uncharacterized protein LOC111021400 isoform X1

9.9e-36

91.58

Show/hide

Query:  MASACQRIASRISQSSFR-TIRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQAFLC
        MASAC RIASRISQSSFR  +RT SP KSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ  LC
Subjt:  MASACQRIASRISQSSFR-TIRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQAFLC

SwissProt top hits

e value

%identity

Alignment

Q6NNL9 Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial

5.7e-04

38.3

Show/hide

Query:  MASACQRIASRISQSSFRTIRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQAFLC
        MAS C R  S+ + S+FR+   N P+  P S         +P       +R   +LG +QSLLP ++AVA AR+ SCL  +S++ R+L+Q  LC
Subjt:  MASACQRIASRISQSSFRTIRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQAFLC

Arabidopsis top hits

e value

%identity

Alignment

AT4G17310.1 unknown protein

2.7e-17

56.7

Show/hide

Query:  MASACQRIASRISQSSFR-TIR--TNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQAFLC
        MASAC+++ +R S SS + T+R  T S + + S+ F LPS+ T    R FS +R PSELGCVQSLLP H+ VA AR+ SCLST SRS RALSQ  LC
Subjt:  MASACQRIASRISQSSFR-TIR--TNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQAFLC

AT4G17310.2 unknown protein

1.7e-16

56.99

Show/hide

Query:  MASACQRIASRISQSSFR-TIR--TNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASAC+++ +R S SS + T+R  T S + + S+ F LPS+ T    R FS +R PSELGCVQSLLP H+ VA AR+ SCLST SRS RALSQ
Subjt:  MASACQRIASRISQSSFR-TIR--TNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

AT5G47455.1 unknown protein

1.9e-15

53.68

Show/hide

Query:  RIASRISQSSFRT-IRT----------NSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        R  SR S SSF++ IR+          +SPA + S+ F +PSK  A  + RFS +R PSELGCVQSLLP H+ VA AR+ SCLST SRS RAL+Q
Subjt:  RIASRISQSSFRT-IRT----------NSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

AT5G47455.4 unknown protein

1.9e-15

53.68

Show/hide

Query:  RIASRISQSSFRT-IRT----------NSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        R  SR S SSF++ IR+          +SPA + S+ F +PSK  A  + RFS +R PSELGCVQSLLP H+ VA AR+ SCLST SRS RAL+Q
Subjt:  RIASRISQSSFRT-IRT----------NSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

AT5G47455.5 unknown protein

1.9e-15

53.68

Show/hide

Query:  RIASRISQSSFRT-IRT----------NSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        R  SR S SSF++ IR+          +SPA + S+ F +PSK  A  + RFS +R PSELGCVQSLLP H+ VA AR+ SCLST SRS RAL+Q
Subjt:  RIASRISQSSFRT-IRT----------NSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCCGCCTGCCAAAGAATTGCGAGTAGAATCTCCCAATCTTCCTTCAGAACAATCCGTACAAATTCTCCGGCCAAATCTCCATCTTCTCCATTCCCTCTACCGTC
TAAATCCACTGCACCTTCTGTTCGCCGATTCTCGCTCGCCAGGTCTCCGTCGGAGCTGGGATGCGTTCAATCCCTTTTGCCTTTTCACAACGCGGTTGCTGGAGCGAGAA
TGATTTCGTGTCTGAGCACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGCTTTTTTATGCATTATCTGTAGACTTTTCCTTTTCTTGTTCTGCAATTGTTTGTCAGTG
TCCTTGTGCTGGTATTTGCTGATTCTTGTTGTCTTTTTCGTTGGTGTATTGTTCCGCAAATCTTGCAGATTGTATATGAAGCACATAATTTCAATTGTCAATATGCTTGA
AAGAAATAGATTGGAAATGCATTTGATGGTACGTGAGACATATTTGCTGTTTTTGAAGCTAGGTTTATCCGTTCCGAGGTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MASACQRIASRISQSSFRTIRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQAFLCIICRLFLFLFCNCLSV
SLCWYLLILVVFFVGVLFRKSCRLYMKHIISIVNMLERNRLEMHLMVRETYLLFLKLGLSVPR

Tan0016331 (gene) of Snake gourd v1 genome