; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016346 (gene) of Snake gourd v1 genome

Gene IDTan0016346
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationLG01:31338838..31341932
RNA-Seq ExpressionTan0016346
SyntenyTan0016346
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4263564.1 unnamed protein product [Prunus armeniaca]6.3e-3226.55Show/hide
Query:  ICHPLWMSLS-----IWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVDPILTGLNVCNLIR
        +C   W  L      I ++++ RYF   +FL  + G+ PS+TW+S+LWGRDL +   RW++G+G  +NI  DPW+  +       +  +     VC+L  
Subjt:  ICHPLWMSLS-----IWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVDPILTGLNVCNLIR

Query:  ADGFWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAYHLG---KFAAQRTTS--VGCRISIVKQGSLNW----------------
        A G WD  K+   F+  +A+ ILSIP  GD   D  +W  TK G +SV+S Y      K   + +T    G   S +K     W                
Subjt:  ADGFWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAYHLG---KFAAQRTTS--VGCRISIVKQGSLNW----------------

Query:  ERVLLSTQLQI-QEFTQHEA-AMIQTPNHLVTTTEA-----------------------------------WEPPNKGWWKLNTDASWCSINNHGGVGWI
        + +L S ++   +  TQ E    +  P++ +  T A                                   W PP    +KLN D +        G G I
Subjt:  ERVLLSTQLQI-QEFTQHEA-AMIQTPNHLVTTTEA-----------------------------------WEPPNKGWWKLNTDASWCSINNHGGVGWI

Query:  LREWTGRIMRAGHRHTTDRWSITILELYGILTGLSFIQEYN-TPLLVESDSWEAIRLINGDDNDKTKAGDFAKKIRQRAISWTNISFRHNRRETNMATYK
        +R+  G+++ A       R S+   ELY +  G+SF  + +  PL +ESDS +A+ ++N ++      G     +R+  +   + + RH  R+ N A ++
Subjt:  LREWTGRIMRAGHRHTTDRWSITILELYGILTGLSFIQEYN-TPLLVESDSWEAIRLINGDDNDKTKAGDFAKKIRQRAISWTNISFRHNRRETNMATYK

Query:  LAQ
        +A+
Subjt:  LAQ

CAB4277969.1 unnamed protein product [Prunus armeniaca]3.3e-2824.89Show/hide
Query:  ICHPLWMSLS-----IWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVDPILTGLNVCNLIR
        +C   W  L      I ++++ RYF   +FL  + G+ PS+TW+SILWGRDL +   RW++G+G  +NI  DPW+  +       +  +     VC+L  
Subjt:  ICHPLWMSLS-----IWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVDPILTGLNVCNLIR

Query:  ADGFWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAY-----------------------------HLGK---------------
        A G WD  K+   F+  +A+ ILSIP  GD   D  +W  TK G +SV+S Y                             HL K               
Subjt:  ADGFWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAY-----------------------------HLGK---------------

Query:  ------------------------FAAQRTT---SVGCRISIVKQGSLNW----------------------------------------ER--VLLSTQ
                                FAA+ TT    VGC + +    +L++                                        ER  VL  +Q
Subjt:  ------------------------FAAQRTT---SVGCRISIVKQGSLNW----------------------------------------ER--VLLSTQ

Query:  -----LQIQ-------EFTQHEAAMIQTPNHLVTTTEAWEPPNKGWWKLNTDASWCSINNHGGVGWILREWTGRIMRAGHRHTTDRWSITILELYGILTG
             + +Q       EF ++ AA  ++ +  V   + W PP    +KLN D +        G G I+R+  G+++ A       R S+   ELY +  G
Subjt:  -----LQIQ-------EFTQHEAAMIQTPNHLVTTTEAWEPPNKGWWKLNTDASWCSINNHGGVGWILREWTGRIMRAGHRHTTDRWSITILELYGILTG

Query:  LSFIQEYN-TPLLVESDSWEAIRLINGDDNDKTKAGDFAKKIRQRAISWTNISFRHNRRETNMATYKLAQ
        +SF  + +  PL +ESDS +A+ ++N ++      G     +R+  +   + + RH  R+ N A +++A+
Subjt:  LSFIQEYN-TPLLVESDSWEAIRLINGDDNDKTKAGDFAKKIRQRAISWTNISFRHNRRETNMATYKLAQ

CAB4277970.1 unnamed protein product [Prunus armeniaca]3.3e-2824.89Show/hide
Query:  ICHPLWMSLS-----IWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVDPILTGLNVCNLIR
        +C   W  L      I ++++ RYF   +FL  + G+ PS+TW+SILWGRDL +   RW++G+G  +NI  DPW+  +       +  +     VC+L  
Subjt:  ICHPLWMSLS-----IWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVDPILTGLNVCNLIR

Query:  ADGFWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAY-----------------------------HLGK---------------
        A G WD  K+   F+  +A+ ILSIP  GD   D  +W  TK G +SV+S Y                             HL K               
Subjt:  ADGFWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAY-----------------------------HLGK---------------

Query:  ------------------------FAAQRTT---SVGCRISIVKQGSLNW----------------------------------------ER--VLLSTQ
                                FAA+ TT    VGC + +    +L++                                        ER  VL  +Q
Subjt:  ------------------------FAAQRTT---SVGCRISIVKQGSLNW----------------------------------------ER--VLLSTQ

Query:  -----LQIQ-------EFTQHEAAMIQTPNHLVTTTEAWEPPNKGWWKLNTDASWCSINNHGGVGWILREWTGRIMRAGHRHTTDRWSITILELYGILTG
             + +Q       EF ++ AA  ++ +  V   + W PP    +KLN D +        G G I+R+  G+++ A       R S+   ELY +  G
Subjt:  -----LQIQ-------EFTQHEAAMIQTPNHLVTTTEAWEPPNKGWWKLNTDASWCSINNHGGVGWILREWTGRIMRAGHRHTTDRWSITILELYGILTG

Query:  LSFIQEYN-TPLLVESDSWEAIRLINGDDNDKTKAGDFAKKIRQRAISWTNISFRHNRRETNMATYKLAQ
        +SF  + +  PL +ESDS +A+ ++N ++      G     +R+  +   + + RH  R+ N A +++A+
Subjt:  LSFIQEYN-TPLLVESDSWEAIRLINGDDNDKTKAGDFAKKIRQRAISWTNISFRHNRRETNMATYKLAQ

XP_015388020.1 uncharacterized protein LOC107177951 [Citrus sinensis]8.3e-3226.98Show/hide
Query:  SWRICHPLWMSLSIWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVDPILTGLNVCNLIRAD
        SWRI       L+  +V + +YF+   F++  +G+NPSY WRSILWGR++     RW++ +G  + + +  WL      K +    +     V  LI  D
Subjt:  SWRICHPLWMSLSIWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVDPILTGLNVCNLIRAD

Query:  GFWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAYHLG---KFAAQRTTSVGCRISIVKQGSLNWERVLLSTQLQIQEFTQHEAA
          W +D IR+HF+Q+DA  IL IP       D+++W   KKG +SV+S Y L    KF  + ++S        K+G  +W  +     LQI E  + E +
Subjt:  GFWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAYHLG---KFAAQRTTSVGCRISIVKQGSLNWERVLLSTQLQIQEFTQHEAA

Query:  M---------------IQTP------NHLVTTTEAWEPPNKGWWKLNTDASWCSINNHGGVGWILREWTGRIMRAGHRHT------------TDRWSITI
                        IQ P      +  + + E W  P  GW+K+N DA+    N   G+G ++R   G+++ A  + +              R+ + +
Subjt:  M---------------IQTP------NHLVTTTEAWEPPNKGWWKLNTDASWCSINNHGGVGWILREWTGRIMRAGHRHT------------TDRWSITI

Query:  LELYGILTGLSFIQEYNTPLLVESDSWEAIRLINGDDNDKTKAGDFAKKIRQRAISWTNISFRHNRRETNMATYKLAQ
         E+ G L           PL+VE+DS E   L++   + K +      ++++      ++  +H  R  N   + LA+
Subjt:  LELYGILTGLSFIQEYNTPLLVESDSWEAIRLINGDDNDKTKAGDFAKKIRQRAISWTNISFRHNRRETNMATYKLAQ

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]4.7e-3550.65Show/hide
Query:  SWRIC-HPLWMSLSIWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVDPILTGLNVCNLIRA
        SWRI  HP      + K  R +YFK+G+FLQ  LG  PSY WRSILWGRDLFK  YRWKVGNG  IN+  DPWL  +G    ++    +   +V  L+  
Subjt:  SWRIC-HPLWMSLSIWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVDPILTGLNVCNLIRA

Query:  DGFWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAYHLG
         G WDE K+RE F   +AD IL  P       DEI+W   K G+FSVRSAYHLG
Subjt:  DGFWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAYHLG

TrEMBL top hitse value%identityAlignment
A0A2N9IYC8 Reverse transcriptase domain-containing protein9.9e-3128.29Show/hide
Query:  WRICHPLWMSLSIWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVDPILTGL-NVCNLIRAD
        WR+ H    S   +KV++ +YF   + L+V   T  SY WRSIL  RDL      W+VG G  I I  D WL+     + +   P+ T + +V +LI +D
Subjt:  WRICHPLWMSLSIWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVDPILTGL-NVCNLIRAD

Query:  -GFWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAYHLGKFAAQRTTSVGCRISIVKQGSLNWERVLLSTQLQIQEFTQHEAAMI
           W  + ++E F   +A  IL IP +    +D +VW  TK+GV++VRS YHL      R           K   L W+ +  + +  ++     +    
Subjt:  -GFWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAYHLGKFAAQRTTSVGCRISIVKQGSLNWERVLLSTQLQIQEFTQHEAAMI

Query:  QTPNHLVTTTEAWEPPNKGWWKLNTDASWCSINNHGGVGWILREWTGRIMRAGHRHTTDRWSITILELYGILTGLSFIQEYN-TPLLVESDSWEAIRLIN
        ++     TT   W+PP    +K+N D +  +  N  G+G I+R   G +M A  +      S+  +E     + + F ++     + +E DS   +  I 
Subjt:  QTPNHLVTTTEAWEPPNKGWWKLNTDASWCSINNHGGVGWILREWTGRIMRAGHRHTTDRWSITILELYGILTGLSFIQEYN-TPLLVESDSWEAIRLIN

Query:  GDDNDKTKAGDFAKKIRQRAISWTNISFRHNRRETNMATYKLAQRGKHLLREENWQE
              T  G+  + IRQ A    ++ F H +RE N+  + LA+R       E W E
Subjt:  GDDNDKTKAGDFAKKIRQRAISWTNISFRHNRRETNMATYKLAQRGKHLLREENWQE

A0A6J1DRA0 uncharacterized protein LOC1110224232.3e-3550.65Show/hide
Query:  SWRIC-HPLWMSLSIWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVDPILTGLNVCNLIRA
        SWRI  HP      + K  R +YFK+G+FLQ  LG  PSY WRSILWGRDLFK  YRWKVGNG  IN+  DPWL  +G    ++    +   +V  L+  
Subjt:  SWRIC-HPLWMSLSIWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVDPILTGLNVCNLIRA

Query:  DGFWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAYHLG
         G WDE K+RE F   +AD IL  P       DEI+W   K G+FSVRSAYHLG
Subjt:  DGFWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAYHLG

A0A6J5TIF9 Reverse transcriptase domain-containing protein3.1e-3226.55Show/hide
Query:  ICHPLWMSLS-----IWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVDPILTGLNVCNLIR
        +C   W  L      I ++++ RYF   +FL  + G+ PS+TW+S+LWGRDL +   RW++G+G  +NI  DPW+  +       +  +     VC+L  
Subjt:  ICHPLWMSLS-----IWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVDPILTGLNVCNLIR

Query:  ADGFWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAYHLG---KFAAQRTTS--VGCRISIVKQGSLNW----------------
        A G WD  K+   F+  +A+ ILSIP  GD   D  +W  TK G +SV+S Y      K   + +T    G   S +K     W                
Subjt:  ADGFWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAYHLG---KFAAQRTTS--VGCRISIVKQGSLNW----------------

Query:  ERVLLSTQLQI-QEFTQHEA-AMIQTPNHLVTTTEA-----------------------------------WEPPNKGWWKLNTDASWCSINNHGGVGWI
        + +L S ++   +  TQ E    +  P++ +  T A                                   W PP    +KLN D +        G G I
Subjt:  ERVLLSTQLQI-QEFTQHEA-AMIQTPNHLVTTTEA-----------------------------------WEPPNKGWWKLNTDASWCSINNHGGVGWI

Query:  LREWTGRIMRAGHRHTTDRWSITILELYGILTGLSFIQEYN-TPLLVESDSWEAIRLINGDDNDKTKAGDFAKKIRQRAISWTNISFRHNRRETNMATYK
        +R+  G+++ A       R S+   ELY +  G+SF  + +  PL +ESDS +A+ ++N ++      G     +R+  +   + + RH  R+ N A ++
Subjt:  LREWTGRIMRAGHRHTTDRWSITILELYGILTGLSFIQEYN-TPLLVESDSWEAIRLINGDDNDKTKAGDFAKKIRQRAISWTNISFRHNRRETNMATYK

Query:  LAQ
        +A+
Subjt:  LAQ

A0A6J5UN24 Uncharacterized protein1.6e-2824.89Show/hide
Query:  ICHPLWMSLS-----IWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVDPILTGLNVCNLIR
        +C   W  L      I ++++ RYF   +FL  + G+ PS+TW+SILWGRDL +   RW++G+G  +NI  DPW+  +       +  +     VC+L  
Subjt:  ICHPLWMSLS-----IWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVDPILTGLNVCNLIR

Query:  ADGFWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAY-----------------------------HLGK---------------
        A G WD  K+   F+  +A+ ILSIP  GD   D  +W  TK G +SV+S Y                             HL K               
Subjt:  ADGFWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAY-----------------------------HLGK---------------

Query:  ------------------------FAAQRTT---SVGCRISIVKQGSLNW----------------------------------------ER--VLLSTQ
                                FAA+ TT    VGC + +    +L++                                        ER  VL  +Q
Subjt:  ------------------------FAAQRTT---SVGCRISIVKQGSLNW----------------------------------------ER--VLLSTQ

Query:  -----LQIQ-------EFTQHEAAMIQTPNHLVTTTEAWEPPNKGWWKLNTDASWCSINNHGGVGWILREWTGRIMRAGHRHTTDRWSITILELYGILTG
             + +Q       EF ++ AA  ++ +  V   + W PP    +KLN D +        G G I+R+  G+++ A       R S+   ELY +  G
Subjt:  -----LQIQ-------EFTQHEAAMIQTPNHLVTTTEAWEPPNKGWWKLNTDASWCSINNHGGVGWILREWTGRIMRAGHRHTTDRWSITILELYGILTG

Query:  LSFIQEYN-TPLLVESDSWEAIRLINGDDNDKTKAGDFAKKIRQRAISWTNISFRHNRRETNMATYKLAQ
        +SF  + +  PL +ESDS +A+ ++N ++      G     +R+  +   + + RH  R+ N A +++A+
Subjt:  LSFIQEYN-TPLLVESDSWEAIRLINGDDNDKTKAGDFAKKIRQRAISWTNISFRHNRRETNMATYKLAQ

A0A6J5UN51 Reverse transcriptase domain-containing protein1.6e-2824.89Show/hide
Query:  ICHPLWMSLS-----IWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVDPILTGLNVCNLIR
        +C   W  L      I ++++ RYF   +FL  + G+ PS+TW+SILWGRDL +   RW++G+G  +NI  DPW+  +       +  +     VC+L  
Subjt:  ICHPLWMSLS-----IWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVDPILTGLNVCNLIR

Query:  ADGFWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAY-----------------------------HLGK---------------
        A G WD  K+   F+  +A+ ILSIP  GD   D  +W  TK G +SV+S Y                             HL K               
Subjt:  ADGFWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAY-----------------------------HLGK---------------

Query:  ------------------------FAAQRTT---SVGCRISIVKQGSLNW----------------------------------------ER--VLLSTQ
                                FAA+ TT    VGC + +    +L++                                        ER  VL  +Q
Subjt:  ------------------------FAAQRTT---SVGCRISIVKQGSLNW----------------------------------------ER--VLLSTQ

Query:  -----LQIQ-------EFTQHEAAMIQTPNHLVTTTEAWEPPNKGWWKLNTDASWCSINNHGGVGWILREWTGRIMRAGHRHTTDRWSITILELYGILTG
             + +Q       EF ++ AA  ++ +  V   + W PP    +KLN D +        G G I+R+  G+++ A       R S+   ELY +  G
Subjt:  -----LQIQ-------EFTQHEAAMIQTPNHLVTTTEAWEPPNKGWWKLNTDASWCSINNHGGVGWILREWTGRIMRAGHRHTTDRWSITILELYGILTG

Query:  LSFIQEYN-TPLLVESDSWEAIRLINGDDNDKTKAGDFAKKIRQRAISWTNISFRHNRRETNMATYKLAQ
        +SF  + +  PL +ESDS +A+ ++N ++      G     +R+  +   + + RH  R+ N A +++A+
Subjt:  LSFIQEYN-TPLLVESDSWEAIRLINGDDNDKTKAGDFAKKIRQRAISWTNISFRHNRRETNMATYKLAQ

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003105.6e-0735.53Show/hide
Query:  SWRICHPLWMSLSIWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAE
        S+RI H     LS  ++ R RYF   + ++ ++GT PSY WRSI+ GR+L        +G+G    +  D W++ E
Subjt:  SWRICHPLWMSLSIWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAE

Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein2.9e-0629.01Show/hide
Query:  WEPPNKGWWKLNTDASWCSINNHGGVGWILREWTGRIMRAGHRHTTDRWSITILELYGILTGLSFIQEYNTPLL-VESDSWEAIRLINGDDNDKTKAGDF
        W PP +GW K N D+ +   + +   GW +RE  G I+  G+            E  G L  L  I  +    +  ESDS   + LIN  + D +  G  
Subjt:  WEPPNKGWWKLNTDASWCSINNHGGVGWILREWTGRIMRAGHRHTTDRWSITILELYGILTGLSFIQEYNTPLL-VESDSWEAIRLINGDDNDKTKAGDF

Query:  AKKIRQRAISWTNISFRHNRRETNMATYKLA
           IR   +     S     RE N A   LA
Subjt:  AKKIRQRAISWTNISFRHNRRETNMATYKLA

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-0731.87Show/hide
Query:  WEPPNKGWWKLNTDASWCSINNHGGVGWILREWTGRIMRAGHRHTTDRWSITILELYGILTGLSFIQEYN-TPLLVESDSWEAIRLINGDD
        W+ P   W K NTDA+W   N   G+GWILR  +G ++  G R      ++   EL  +   +  +  +N   ++ ESD+   + L+N DD
Subjt:  WEPPNKGWWKLNTDASWCSINNHGGVGWILREWTGRIMRAGHRHTTDRWSITILELYGILTGLSFIQEYN-TPLLVESDSWEAIRLINGDD

AT4G29090.1 Ribonuclease H-like superfamily protein1.1e-1028.03Show/hide
Query:  LWMSLS-----IWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVD--------PILTGLNVC
        +W  LS     + KV++ RYF   + L   LG+ PS+ W+SI   +++ +   R  VGNG  I I    WL ++     L +          + + L V 
Subjt:  LWMSLS-----IWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDKTLWVD--------PILTGLNVC

Query:  NLIRADG-FWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAY
        +LI   G  W +D I   F + +   I  +   G    D   W  T  G ++V+S Y
Subjt:  NLIRADG-FWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAY

AT4G29090.1 Ribonuclease H-like superfamily protein8.9e-0829.17Show/hide
Query:  WEPPNKGWWKLNTDASWCSINNHGGVGWILREWTGRIMRAGHRHTTDRWSITILEL----YGILTGLSFIQEYNTPLLVESDSWEAIRLINGDD---NDK
        W PP   W K NTDA+W   N   G+GW+LR   G +   G R      S+   EL    + +L+   F   Y   ++ ESDS   I ++N D+   + K
Subjt:  WEPPNKGWWKLNTDASWCSINNHGGVGWILREWTGRIMRAGHRHTTDRWSITILEL----YGILTGLSFIQEYNTPLLVESDSWEAIRLINGDD---NDK

Query:  TKAGDFAKKIRQRAISWTNISFRHNRRETNMATYKLAQRGKHLL
            D  + + Q    +T + F    RE N    ++A+     L
Subjt:  TKAGDFAKKIRQRAISWTNISFRHNRRETNMATYKLAQRGKHLL

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.0e-0835.53Show/hide
Query:  SWRICHPLWMSLSIWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAE
        S+RI H     LS  ++ R RYF   + ++ ++GT PSY WRSI+ GR+L        +G+G    +  D W++ E
Subjt:  SWRICHPLWMSLSIWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTGAGAAACTTTGCTTGGAGGCTTTGTGTCCTCCACTATGAATTGTCTTATTTGCAAGAAAGCATGACCTTATATGAAGATCTTAGTTGGAGGATTTGCCATCC
ACTTTGGATGTCCCTAAGCATTTGGAAAGTTTATCGTAGACGATATTTCAAGTCAGGTAACTTCCTTCAGGTAACATTAGGAACAAATCCATCTTATACCTGGCGCAGTA
TTTTGTGGGGGCGCGATCTCTTTAAGCACGACTATCGTTGGAAGGTCGGCAATGGACACCAGATCAACATCAAAGAGGATCCTTGGTTGTTGGCGGAAGGACGGGACAAA
ACCCTTTGGGTGGATCCAATCCTGACTGGCTTAAATGTGTGCAATTTGATTCGAGCCGACGGCTTCTGGGACGAGGATAAGATACGAGAGCATTTCAACCAGGATGATGC
AGACCACATTCTCTCCATCCCGCGAACTGGGGATATGTTTAGTGATGAGATCGTTTGGAAGTGTACTAAGAAAGGGGTCTTCTCGGTCCGAAGCGCCTACCATCTGGGGA
AGTTTGCAGCGCAGAGGACTACTTCTGTTGGATGCAGGATAAGCATAGTCAAACAGGGCAGTCTGAACTGGGAAAGGGTGTTACTTAGTACACAACTCCAAATTCAGGAG
TTCACTCAGCATGAGGCAGCTATGATCCAAACCCCAAATCATTTGGTTACAACGACGGAAGCTTGGGAGCCGCCGAATAAGGGTTGGTGGAAATTAAATACCGACGCATC
CTGGTGCTCGATCAACAATCACGGGGGAGTAGGCTGGATCTTACGAGAATGGACAGGGAGGATAATGCGTGCAGGACATCGCCATACCACAGACAGGTGGTCAATCACCA
TCTTGGAACTTTATGGTATCCTCACGGGTTTGAGTTTCATCCAGGAATACAACACACCCCTTTTGGTGGAATCTGACTCTTGGGAGGCTATACGACTTATCAATGGTGAT
GACAATGACAAAACAAAGGCAGGAGATTTCGCGAAAAAGATCAGGCAACGAGCAATTTCGTGGACTAACATTTCTTTTCGTCACAATAGGCGAGAGACAAACATGGCCAC
TTACAAACTGGCGCAACGAGGGAAACACCTACTGAGAGAAGAAAATTGGCAAGAGGGGCCCACCGTAGCCCTTTTGGAATTTCTGTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTGAGAAACTTTGCTTGGAGGCTTTGTGTCCTCCACTATGAATTGTCTTATTTGCAAGAAAGCATGACCTTATATGAAGATCTTAGTTGGAGGATTTGCCATCC
ACTTTGGATGTCCCTAAGCATTTGGAAAGTTTATCGTAGACGATATTTCAAGTCAGGTAACTTCCTTCAGGTAACATTAGGAACAAATCCATCTTATACCTGGCGCAGTA
TTTTGTGGGGGCGCGATCTCTTTAAGCACGACTATCGTTGGAAGGTCGGCAATGGACACCAGATCAACATCAAAGAGGATCCTTGGTTGTTGGCGGAAGGACGGGACAAA
ACCCTTTGGGTGGATCCAATCCTGACTGGCTTAAATGTGTGCAATTTGATTCGAGCCGACGGCTTCTGGGACGAGGATAAGATACGAGAGCATTTCAACCAGGATGATGC
AGACCACATTCTCTCCATCCCGCGAACTGGGGATATGTTTAGTGATGAGATCGTTTGGAAGTGTACTAAGAAAGGGGTCTTCTCGGTCCGAAGCGCCTACCATCTGGGGA
AGTTTGCAGCGCAGAGGACTACTTCTGTTGGATGCAGGATAAGCATAGTCAAACAGGGCAGTCTGAACTGGGAAAGGGTGTTACTTAGTACACAACTCCAAATTCAGGAG
TTCACTCAGCATGAGGCAGCTATGATCCAAACCCCAAATCATTTGGTTACAACGACGGAAGCTTGGGAGCCGCCGAATAAGGGTTGGTGGAAATTAAATACCGACGCATC
CTGGTGCTCGATCAACAATCACGGGGGAGTAGGCTGGATCTTACGAGAATGGACAGGGAGGATAATGCGTGCAGGACATCGCCATACCACAGACAGGTGGTCAATCACCA
TCTTGGAACTTTATGGTATCCTCACGGGTTTGAGTTTCATCCAGGAATACAACACACCCCTTTTGGTGGAATCTGACTCTTGGGAGGCTATACGACTTATCAATGGTGAT
GACAATGACAAAACAAAGGCAGGAGATTTCGCGAAAAAGATCAGGCAACGAGCAATTTCGTGGACTAACATTTCTTTTCGTCACAATAGGCGAGAGACAAACATGGCCAC
TTACAAACTGGCGCAACGAGGGAAACACCTACTGAGAGAAGAAAATTGGCAAGAGGGGCCCACCGTAGCCCTTTTGGAATTTCTGTCTTAA
Protein sequenceShow/hide protein sequence
MSVRNFAWRLCVLHYELSYLQESMTLYEDLSWRICHPLWMSLSIWKVYRRRYFKSGNFLQVTLGTNPSYTWRSILWGRDLFKHDYRWKVGNGHQINIKEDPWLLAEGRDK
TLWVDPILTGLNVCNLIRADGFWDEDKIREHFNQDDADHILSIPRTGDMFSDEIVWKCTKKGVFSVRSAYHLGKFAAQRTTSVGCRISIVKQGSLNWERVLLSTQLQIQE
FTQHEAAMIQTPNHLVTTTEAWEPPNKGWWKLNTDASWCSINNHGGVGWILREWTGRIMRAGHRHTTDRWSITILELYGILTGLSFIQEYNTPLLVESDSWEAIRLINGD
DNDKTKAGDFAKKIRQRAISWTNISFRHNRRETNMATYKLAQRGKHLLREENWQEGPTVALLEFLS