; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016360 (gene) of Snake gourd v1 genome

Gene IDTan0016360
OrganismTrichosanthes anguina (Snake gourd v1)
Description54S ribosomal protein L51, mitochondrial
Genome locationLG10:16975068..16980962
RNA-Seq ExpressionTan0016360
SyntenyTan0016360
Gene Ontology termsGO:0032543 - mitochondrial translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029113.1 mrpl51 [Cucurbita argyrosperma subsp. argyrosperma]3.5e-5893.28Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLP FK+KNPQLEVV ELIRGQHPHLK FYKNNNQRVVCV+NLD EEIHL ATRLRNALGRKVIKL+T
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTWKTDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

XP_022158383.1 54S ribosomal protein L51, mitochondrial [Momordica charantia]7.7e-5893.28Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLP FKEKNPQLEVVTELIRGQHPHLK FYKNNN+RVVCVKNLD EEI+L A RLRNALGRKVIKLRT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTW TDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

XP_022932626.1 54S ribosomal protein L51, mitochondrial [Cucurbita moschata]1.0e-5792.44Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLP FK+KNPQL+VV ELIRGQHPHLK FYKNNNQRVVCV+NLD EEIHL ATRLRNALGRKVIKL+T
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTWKTDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

XP_022972093.1 54S ribosomal protein L51, mitochondrial-like [Cucurbita maxima]1.3e-5792.44Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLP FK+KNPQL+VV ELIRGQHPHLK FYKNNNQRVVCV+NLD EEIHL ATRLRNALGRKVIKL+T
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTWKTDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

XP_038877046.1 54S ribosomal protein L51, mitochondrial [Benincasa hispida]3.8e-5790.76Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT
        MALRGVWQL+KL+VSYCDWGGSSRGIRAFMDSQLP FKEKNPQLEVVTELIRGQHPHLKGFYK+NN RVVCVKN+D EEIHL A RLRNALGRKV+KLRT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTW TDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

TrEMBL top hitse value%identityAlignment
A0A1S3BXU0 54S ribosomal protein L51, mitochondrial6.6e-5586.55Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT
        MALRGVWQL+KL+VSYCDWGGSSRGIRAFM+SQ+P FKEKNPQLEVVTEL RGQHP+LKGFYK+NN RVVCVKN+D EEIH  ATRLRN+LGRKV+KLRT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTW TDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

A0A6J1DVX7 54S ribosomal protein L51, mitochondrial3.7e-5893.28Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLP FKEKNPQLEVVTELIRGQHPHLK FYKNNN+RVVCVKNLD EEI+L A RLRNALGRKVIKLRT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTW TDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

A0A6J1EWV2 54S ribosomal protein L51, mitochondrial4.9e-5892.44Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLP FK+KNPQL+VV ELIRGQHPHLK FYKNNNQRVVCV+NLD EEIHL ATRLRNALGRKVIKL+T
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTWKTDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

A0A6J1I8W1 54S ribosomal protein L51, mitochondrial-like6.3e-5892.44Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLP FK+KNPQL+VV ELIRGQHPHLK FYKNNNQRVVCV+NLD EEIHL ATRLRNALGRKVIKL+T
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTWKTDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

A0A6J1IW90 54S ribosomal protein L51, mitochondrial-like2.0e-5686.55Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT
        MALRGVWQL+KLIVSYCDWGGSSRGIRAFMDS+LP F+EKNPQL++VTELIRGQHPHLKGFYK+NN RV+CVKN+D E+IHL ATRLRNALGRKV+KLRT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPS QGTW TDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

SwissProt top hitse value%identityAlignment
Q06090 54S ribosomal protein L51, mitochondrial1.1e-0931.58Show/hide
Query:  VWQLQKLIVSYCDWGGSSRGIRAFMDS-QLPTFKEKNP--QLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRTRH
        V+  +K+ + +C+WGGSS G+R F+ S +L  + ++ P  Q EV+    +  HP L+  Y N  ++V+CV+NL+ + +  +   L+++ G  +++ RT++
Subjt:  VWQLQKLIVSYCDWGGSSRGIRAFMDS-QLPTFKEKNP--QLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRTRH

Query:  ---VTKNPSVQGTW
            + N SV+G W
Subjt:  ---VTKNPSVQGTW

Q5A3J1 54S ribosomal protein L51, mitochondrial2.6e-0831.73Show/hide
Query:  KLIVSYCDWGGSSRGIRAFM-DSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRTRHVTKNPSV
        ++ V YC+WGGSS  +R  + +  L  + +  P +    + +RG HP L   Y NN  + V +KN+ Q EI    T      G ++ K   +  + N SV
Subjt:  KLIVSYCDWGGSSRGIRAFM-DSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRTRHVTKNPSV

Query:  QGTW
        +G W
Subjt:  QGTW

Q758S3 54S ribosomal protein L51, mitochondrial3.9e-1233.62Show/hide
Query:  VWQLQKLIVSYCDWGGSSRGIRAFMDS-QLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRTRHVT
        ++  +K+ + YC+WGGSS+G+R F+ S +L  + EK PQ++    + +  HP LK  Y N   + +CV+NL+ + + L+   LR + G ++     RH  
Subjt:  VWQLQKLIVSYCDWGGSSRGIRAFMDS-QLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRTRHVT

Query:  K-------NPSVQGTW
        K       N SV+G W
Subjt:  K-------NPSVQGTW

Q99N89 39S ribosomal protein L43, mitochondrial7.6e-0833.64Show/hide
Query:  RGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRTRHV
        R V QLQ+L +S      SSRG R F++ ++  F  +NP + V         P +   Y N   R   V +   EEI     +L +  G  VI++R    
Subjt:  RGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRTRHV

Query:  TKNPSVQGTW
        T NPS+QG W
Subjt:  TKNPSVQGTW

Q9UUC8 54S ribosomal protein L51, mitochondrial3.9e-1227.88Show/hide
Query:  QKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRTRHVTKNPSV
        +++  SYC+WGGSS+G++ F+ ++L +  +++  +E      +G+HP ++ +Y    ++V+C + +    I  +A   R++ G K   ++    + NPSV
Subjt:  QKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRTRHVTKNPSV

Query:  QGTW
        +G W
Subjt:  QGTW

Arabidopsis top hitse value%identityAlignment
AT3G59650.1 mitochondrial ribosomal protein L51/S25/CI-B8 family protein5.5e-5478.99Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT
        MALRGVWQL+KL+VSYC+WGGSSRGIRAFM+S+LP  KEKNPQLEV+TEL RGQHP+LKG Y+N N+RVVCVKN+D EE+ L ATRLRN+LGRKV+KLRT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTK+PSVQGTW T V+F
Subjt:  RHVTKNPSVQGTWKTDVRF

AT3G59650.2 mitochondrial ribosomal protein L51/S25/CI-B8 family protein2.4e-4964.38Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYK---------------------------NNNQRVVCVK
        MALRGVWQL+KL+VSYC+WGGSSRGIRAFM+S+LP  KEKNPQLEV+TEL RGQHP+LKG Y                            N N+RVVCVK
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYK---------------------------NNNQRVVCVK

Query:  NLDQEEIHLQATRLRNALGRKVIKLRTRHVTKNPSVQGTWKTDVRF
        N+D EE+ L ATRLRN+LGRKV+KLRTRHVTK+PSVQGTW T V+F
Subjt:  NLDQEEIHLQATRLRNALGRKVIKLRTRHVTKNPSVQGTWKTDVRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTGCGAGGTGTATGGCAGCTTCAGAAGCTGATTGTCAGCTATTGTGATTGGGGAGGAAGCAGTAGGGGTATCAGGGCATTTATGGACTCACAATTGCCAACTTT
TAAGGAGAAAAATCCTCAGCTAGAAGTAGTTACTGAACTCATTCGTGGCCAGCATCCACACTTGAAGGGCTTCTACAAAAACAACAATCAACGGGTGGTATGTGTAAAGA
ACTTGGATCAGGAAGAAATACATTTACAAGCAACGAGACTAAGGAACGCACTGGGGCGAAAGGTCATAAAACTGAGGACCAGACATGTAACCAAAAATCCTAGTGTGCAA
GGTACGTGGAAAACTGATGTAAGATTTTGA
mRNA sequenceShow/hide mRNA sequence
AAATTTTTAAAAATGACATGAAGTGTAACACTCAAGAATTCTATTTACCTTTTAATTTGTATTTTGAATTAATTTTATGAAAATTCAATTAATAAGGCTTTGAATTTTCT
TATTCTAATTTAAGTTTTGCAAATTTAAGAGAATATATATGGATTTAACCATATATATATAAAGTTGGGATATTTAATTAAATTCAAGAGAATTGTGTGGTTTTGTCATG
AAGGGCGTTTTGGTAAAAGACATCGAATTAGGGCTTTGACGAGAGACTTTTGTCTTTTAGGTGCATGTTTCGCTAGGCCTTCTCCCTTTCTCTCTCCCTCACCCTCTTCA
CGAAGCTTCTCGCTGCCGCCGTTTCCTCCTTGCCGCCGGAGCCACTCGCGTTGTCGCCGCCGGTAGCTGAGCCGGCCCGAACGAAGCCGCCGCTTGCGCTTCGCCTGAAG
TCCGAGCCGCCGCCTTGCCCATCGATCCGACCTCAGATCTGCGAGCTGCAACCGCCGAGAAGTCGTGCGCCGATCGCCGGTACGCCGTGGTGTCGTGCTCGCTGAAGACG
CCACGCCGGAGACATCCGCTGCAGCCCCGCCGCCGCCGCCTCCGTCGATTGCAGATCCGCTAGCTCGTGGCCGGAAGCGTTTTGGACTTCGCCGGATCCTTGGAGTTCTT
CGAGGTTGGAAGAAAAGGCAGTAGAATCTAAGTGAATTTGGCACCCTTTAGTTGGACGACGATATAAAGATGGCTTTGCGAGGTGTATGGCAGCTTCAGAAGCTGATTGT
CAGCTATTGTGATTGGGGAGGAAGCAGTAGGGGTATCAGGGCATTTATGGACTCACAATTGCCAACTTTTAAGGAGAAAAATCCTCAGCTAGAAGTAGTTACTGAACTCA
TTCGTGGCCAGCATCCACACTTGAAGGGCTTCTACAAAAACAACAATCAACGGGTGGTATGTGTAAAGAACTTGGATCAGGAAGAAATACATTTACAAGCAACGAGACTA
AGGAACGCACTGGGGCGAAAGGTCATAAAACTGAGGACCAGACATGTAACCAAAAATCCTAGTGTGCAAGGTACGTGGAAAACTGATGTAAGATTTTGAGGTTTGGATGA
TTCCTAAAGTGCTTGATTTTGTTTGGAGGTTTTTTTCAATAATAAGATGTTGAAACCAAACTTCTTTATAGAGTAGCTTGAGTTTGTAGTAGTCCCTTTGAGGTTGTTAT
TGTTCCAATCCTCTTAATACTTCCTCTGGAGAAAGTCTTTTCATGAAACATGCCACAATTACGAGGTTATCTTGTAGAATACATGAAGCAAAACAGGATTCTGATTTGAT
TTGTGATTAGTGAACTTCTAATATTTATAGATTGTTGAGATGTTAATTGAACTGGACCATCGGAGATCCAATAGTAAATGCAGCAGTCTCTGAGTATGGCATTCCTTTTC
TTTGCAATGTCG
Protein sequenceShow/hide protein sequence
MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPTFKEKNPQLEVVTELIRGQHPHLKGFYKNNNQRVVCVKNLDQEEIHLQATRLRNALGRKVIKLRTRHVTKNPSVQ
GTWKTDVRF