; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016362 (gene) of Snake gourd v1 genome

Gene IDTan0016362
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Genome locationLG06:22124963..22130610
RNA-Seq ExpressionTan0016362
SyntenyTan0016362
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
NP_001308100.1 transcription factor bHLH113 [Solanum lycopersicum]2.0e-1955.26Show/hide
Query:  LSLPNGTRLIFLFQLRFLLILFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQLPSTFSIEKLSQG-
        +SL + + L  L   R    + ++S+++KEK GERIVALQQLVSPYGKTDTASVLLEAM YI+FLHEQ+KVL APYL   PMS+TQ    +++   SQG 
Subjt:  LSLPNGTRLIFLFQLRFLLILFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQLPSTFSIEKLSQG-

Query:  AWEAMAYTSGLLSS
            ++YT G+ SS
Subjt:  AWEAMAYTSGLLSS

XP_004309594.1 PREDICTED: transcription factor bHLH113 [Fragaria vesca subsp. vesca]4.5e-1971.23Show/hide
Query:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQLPSTFSI
        L +++++RKEKLGERIVALQQLVSPYGKTDTASVLLEAM+YI+FLHEQ+KVL APYL+ TP ++ Q   +FS+
Subjt:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQLPSTFSI

XP_022155423.1 transcription factor bHLH153-like isoform X1 [Momordica charantia]7.4e-2280.77Show/hide
Query:  LIFLFQLRFLLILFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQ
        LI L   R      ++++DRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSR Q
Subjt:  LIFLFQLRFLLILFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQ

XP_022722942.1 transcription factor bHLH153-like isoform X1 [Durio zibethinus]1.5e-1973.97Show/hide
Query:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQLPSTFSI
        L ++++DRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQ+KVL APYL+ TP +  Q  + +S+
Subjt:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQLPSTFSI

XP_022722943.1 transcription factor bHLH153-like isoform X2 [Durio zibethinus]1.5e-1973.97Show/hide
Query:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQLPSTFSI
        L ++++DRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQ+KVL APYL+ TP +  Q  + +S+
Subjt:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQLPSTFSI

TrEMBL top hitse value%identityAlignment
A0A3Q7HIR9 BHLH domain-containing protein9.7e-2055.26Show/hide
Query:  LSLPNGTRLIFLFQLRFLLILFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQLPSTFSIEKLSQG-
        +SL + + L  L   R    + ++S+++KEK GERIVALQQLVSPYGKTDTASVLLEAM YI+FLHEQ+KVL APYL   PMS+TQ    +++   SQG 
Subjt:  LSLPNGTRLIFLFQLRFLLILFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQLPSTFSIEKLSQG-

Query:  AWEAMAYTSGLLSS
            ++YT G+ SS
Subjt:  AWEAMAYTSGLLSS

A0A6J1DMX2 transcription factor bHLH153-like isoform X13.6e-2280.77Show/hide
Query:  LIFLFQLRFLLILFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQ
        LI L   R      ++++DRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSR Q
Subjt:  LIFLFQLRFLLILFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQ

A0A6P5X423 transcription factor bHLH153-like isoform X27.4e-2073.97Show/hide
Query:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQLPSTFSI
        L ++++DRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQ+KVL APYL+ TP +  Q  + +S+
Subjt:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQLPSTFSI

A0A6P5X5K6 transcription factor bHLH153-like isoform X17.4e-2073.97Show/hide
Query:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQLPSTFSI
        L ++++DRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQ+KVL APYL+ TP +  Q  + +S+
Subjt:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQLPSTFSI

M5XFT6 BHLH domain-containing protein2.2e-1952.14Show/hide
Query:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQLPSTFSIEKLSQG-AWEAMAYTSGLLSSL---LL
        L +++++RKEKLGERIVALQQLVSPYGKTDTASVLLEAM+YI+FLHEQ+KVL APYLE TP ++ Q    +S+   S+G     ++ T+G+  S    + 
Subjt:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQLPSTFSIEKLSQG-AWEAMAYTSGLLSSL---LL

Query:  PALKRAFRNYNDAVGSF
          +K     + DA+  F
Subjt:  PALKRAFRNYNDAVGSF

SwissProt top hitse value%identityAlignment
Q7XJU1 Transcription factor bHLH1543.0e-1864.38Show/hide
Query:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQLPSTFSI
        L  +S++RK+KL ERI ALQQLVSPYGKTDTASVLLE M+YIQFL EQ+KVL APYL+ TP +  +    +S+
Subjt:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQLPSTFSI

Q7XJU2 Transcription factor bHLH1536.7e-1872.13Show/hide
Query:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTP
        L  +S++RK+K+GERI ALQQ+VSPYGKTDTASVLL+AM YI+FLHEQ+KVL APYL+  P
Subjt:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTP

Q8GXT3 Transcription factor bHLH1238.5e-1368.63Show/hide
Query:  RKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLE
        RKEK+G+RI ALQQLVSP+GKTD ASVL EA+EYI+FLH+Q+  L  PY++
Subjt:  RKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLE

Q9LT67 Transcription factor bHLH1132.2e-1378Show/hide
Query:  RKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYL
        RKE+LGERI ALQQLVSPYGKTD ASVL EAM YI+FL +QI+VL +PYL
Subjt:  RKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYL

Q9SFZ3 Transcription factor bHLH1101.4e-1261.54Show/hide
Query:  RKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERT---PMSRTQLPS
        RKEKLG+RI ALQQLVSP+GKTDTASVL+EA+ YI+FL  QI+ L  PY+  +   P   +QL S
Subjt:  RKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERT---PMSRTQLPS

Arabidopsis top hitse value%identityAlignment
AT1G05710.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.8e-1972.13Show/hide
Query:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTP
        L  +S++RK+K+GERI ALQQ+VSPYGKTDTASVLL+AM YI+FLHEQ+KVL APYL+  P
Subjt:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTP

AT1G05710.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.8e-1972.13Show/hide
Query:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTP
        L  +S++RK+K+GERI ALQQ+VSPYGKTDTASVLL+AM YI+FLHEQ+KVL APYL+  P
Subjt:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTP

AT1G05710.4 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.8e-1972.13Show/hide
Query:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTP
        L  +S++RK+K+GERI ALQQ+VSPYGKTDTASVLL+AM YI+FLHEQ+KVL APYL+  P
Subjt:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTP

AT1G05710.5 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.8e-1972.13Show/hide
Query:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTP
        L  +S++RK+K+GERI ALQQ+VSPYGKTDTASVLL+AM YI+FLHEQ+KVL APYL+  P
Subjt:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTP

AT2G31730.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.1e-1964.38Show/hide
Query:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQLPSTFSI
        L  +S++RK+KL ERI ALQQLVSPYGKTDTASVLLE M+YIQFL EQ+KVL APYL+ TP +  +    +S+
Subjt:  LFLNSEDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQLPSTFSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCGAGCTCTAGGCTTCTGAATAATTTACAGAGTAATGTTTCTCTTTTCCATGAATCATTTGCATATTTATTAGCTTTGGCTTCTTTTCAAGTGGTAGGTGACAA
AGATAAGAAAAAAGAATGGAACAGAAAAGAAGCCCTTGCTCTGTTGATGAAAGCTATCTCATTTCTCTCACTACCAAACGGCACAAGGCTGATTTTTCTATTTCAACTAA
GGTTTCTTCTCATCCTATTTCTAAATTCTGAAGATAGGAAGGAGAAGCTGGGCGAAAGAATTGTAGCTTTGCAACAACTTGTTTCACCTTATGGAAAGACAGATACTGCT
TCTGTTCTTCTGGAGGCAATGGAATACATACAATTTCTTCACGAACAAATTAAGGTGTTGATTGCTCCATACCTTGAAAGAACACCAATGTCTAGAACACAGTTACCATC
AACTTTTTCAATAGAGAAATTGAGCCAGGGAGCTTGGGAAGCAATGGCTTATACATCTGGGCTCCTGTCAAGCCTTCTTCTTCCAGCTCTGAAAAGAGCGTTTCGCAATT
ACAATGACGCTGTCGGGTCATTTCAACTCGGTAGATCTTCTGGTTTAAAGGGTAATCGTTTTCTTCGTCTAATTCACTGCAAATGTTTTTTTTCAGAAGCAGGAAATTTG
TAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTCGAGCTCTAGGCTTCTGAATAATTTACAGAGTAATGTTTCTCTTTTCCATGAATCATTTGCATATTTATTAGCTTTGGCTTCTTTTCAAGTGGTAGGTGACAA
AGATAAGAAAAAAGAATGGAACAGAAAAGAAGCCCTTGCTCTGTTGATGAAAGCTATCTCATTTCTCTCACTACCAAACGGCACAAGGCTGATTTTTCTATTTCAACTAA
GGTTTCTTCTCATCCTATTTCTAAATTCTGAAGATAGGAAGGAGAAGCTGGGCGAAAGAATTGTAGCTTTGCAACAACTTGTTTCACCTTATGGAAAGACAGATACTGCT
TCTGTTCTTCTGGAGGCAATGGAATACATACAATTTCTTCACGAACAAATTAAGGTGTTGATTGCTCCATACCTTGAAAGAACACCAATGTCTAGAACACAGTTACCATC
AACTTTTTCAATAGAGAAATTGAGCCAGGGAGCTTGGGAAGCAATGGCTTATACATCTGGGCTCCTGTCAAGCCTTCTTCTTCCAGCTCTGAAAAGAGCGTTTCGCAATT
ACAATGACGCTGTCGGGTCATTTCAACTCGGTAGATCTTCTGGTTTAAAGGGTAATCGTTTTCTTCGTCTAATTCACTGCAAATGTTTTTTTTCAGAAGCAGGAAATTTG
TAG
Protein sequenceShow/hide protein sequence
MKSSSRLLNNLQSNVSLFHESFAYLLALASFQVVGDKDKKKEWNRKEALALLMKAISFLSLPNGTRLIFLFQLRFLLILFLNSEDRKEKLGERIVALQQLVSPYGKTDTA
SVLLEAMEYIQFLHEQIKVLIAPYLERTPMSRTQLPSTFSIEKLSQGAWEAMAYTSGLLSSLLLPALKRAFRNYNDAVGSFQLGRSSGLKGNRFLRLIHCKCFFSEAGNL