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Tan0016378 (gene) of Snake gourd v1 genome

Gene IDTan0016378
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationLG02:3564461..3564880
RNA-Seq ExpressionTan0016378
SyntenyTan0016378
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589130.1 hypothetical protein SDJN03_17695, partial [Cucurbita argyrosperma subsp. sororia]4.5e-5782.35Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK
        MSVE+LDGATIVNFVED+E F A +RERF HLD + DGVLSY EMLRELQSLR+FETHFGIDVKPDP+ELSSVYGSLFLQFDRDCNGKVD+ EFM ETKK
Subjt:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK

Query:  MMLAMANGIGFLPIQMVLEENSFLKKAVERESNQSG
        MM+AMANGIGF P+QMVLEENS LK+AVERES + G
Subjt:  MMLAMANGIGFLPIQMVLEENSFLKKAVERESNQSG

XP_008455503.1 PREDICTED: uncharacterized protein LOC103495655 [Cucumis melo]5.8e-5784.33Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK
        MSVE+LD ATIVNFVEDEEAFS  IRERF HLD + DGVL YGEML+ELQSLR+FETHFGID KPDPNELSSVY SLFLQFDRDCNGKVDL EFMAETKK
Subjt:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK

Query:  MMLAMANGIGFLPIQMVLEENSFLKKAVERESNQ
        MMLAMANGIG  P+QM+LEENSFLKKAV+RES +
Subjt:  MMLAMANGIGFLPIQMVLEENSFLKKAVERESNQ

XP_022136066.1 uncharacterized protein LOC111007849 [Momordica charantia]2.0e-5784.33Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK
        MSVELLDGATIV+FVEDEE F AT++ERF HLD++ DGVLSYGEMLRELQSLR+ ETHFGIDVKPDP+E+S+VYGSLFL FDRDCNGKVDL EFMAETKK
Subjt:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK

Query:  MMLAMANGIGFLPIQMVLEENSFLKKAVERESNQ
        MMLAMANGIG LPIQMVLEEN FLKKAVERE+ +
Subjt:  MMLAMANGIGFLPIQMVLEENSFLKKAVERESNQ

XP_022930660.1 uncharacterized protein LOC111437061 [Cucurbita moschata]7.6e-5782.35Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK
        MSVE+LD ATIVNFVED+E F A +RERF HLD + DGVLSY EMLRELQSLR+FETHFGIDVKPDP+ELSSVYGSLFLQFDRDC+GKVD+ EFM ETKK
Subjt:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK

Query:  MMLAMANGIGFLPIQMVLEENSFLKKAVERESNQSG
        MM+AMANGIGF P+QMVLEENSFLKKAVERES + G
Subjt:  MMLAMANGIGFLPIQMVLEENSFLKKAVERESNQSG

XP_023529818.1 uncharacterized protein LOC111792532 [Cucurbita pepo subsp. pepo]2.0e-5783.09Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK
        MSVE+LDGATIVNFVED+E F A +RERF HLD + DGVLSY EMLRELQSLR+FETHFGIDVKPDP+ELSSVYGSLFLQFDRDCNGKVD+ EFM ETKK
Subjt:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK

Query:  MMLAMANGIGFLPIQMVLEENSFLKKAVERESNQSG
        MM+AMANGIG LP+QMVLEENS LKKAVERES + G
Subjt:  MMLAMANGIGFLPIQMVLEENSFLKKAVERESNQSG

TrEMBL top hitse value%identityAlignment
A0A1S3C1T0 uncharacterized protein LOC1034956552.8e-5784.33Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK
        MSVE+LD ATIVNFVEDEEAFS  IRERF HLD + DGVL YGEML+ELQSLR+FETHFGID KPDPNELSSVY SLFLQFDRDCNGKVDL EFMAETKK
Subjt:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK

Query:  MMLAMANGIGFLPIQMVLEENSFLKKAVERESNQ
        MMLAMANGIG  P+QM+LEENSFLKKAV+RES +
Subjt:  MMLAMANGIGFLPIQMVLEENSFLKKAVERESNQ

A0A5D3DDG8 Calcium-binding EF-hand family protein2.8e-5784.33Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK
        MSVE+LD ATIVNFVEDEEAFS  IRERF HLD + DGVL YGEML+ELQSLR+FETHFGID KPDPNELSSVY SLFLQFDRDCNGKVDL EFMAETKK
Subjt:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK

Query:  MMLAMANGIGFLPIQMVLEENSFLKKAVERESNQ
        MMLAMANGIG  P+QM+LEENSFLKKAV+RES +
Subjt:  MMLAMANGIGFLPIQMVLEENSFLKKAVERESNQ

A0A6J1C2G7 uncharacterized protein LOC1110078499.7e-5884.33Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK
        MSVELLDGATIV+FVEDEE F AT++ERF HLD++ DGVLSYGEMLRELQSLR+ ETHFGIDVKPDP+E+S+VYGSLFL FDRDCNGKVDL EFMAETKK
Subjt:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK

Query:  MMLAMANGIGFLPIQMVLEENSFLKKAVERESNQ
        MMLAMANGIG LPIQMVLEEN FLKKAVERE+ +
Subjt:  MMLAMANGIGFLPIQMVLEENSFLKKAVERESNQ

A0A6J1EXF9 uncharacterized protein LOC1114370613.7e-5782.35Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK
        MSVE+LD ATIVNFVED+E F A +RERF HLD + DGVLSY EMLRELQSLR+FETHFGIDVKPDP+ELSSVYGSLFLQFDRDC+GKVD+ EFM ETKK
Subjt:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK

Query:  MMLAMANGIGFLPIQMVLEENSFLKKAVERESNQSG
        MM+AMANGIGF P+QMVLEENSFLKKAVERES + G
Subjt:  MMLAMANGIGFLPIQMVLEENSFLKKAVERESNQSG

A0A6J1JIT4 uncharacterized protein LOC1114861994.1e-5681.62Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK
        MSVE+LDG+TIVNFVED+E F A +RERF HLD + DGVLSY EMLRELQSLR+FETHFGIDVKPDP+ELSSVYGSLFLQFDRD +GKVD+ EFM ETKK
Subjt:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK

Query:  MMLAMANGIGFLPIQMVLEENSFLKKAVERESNQSG
        MM+AMANGIGF P+QMVLEENSFLKKAVERES + G
Subjt:  MMLAMANGIGFLPIQMVLEENSFLKKAVERESNQSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein1.7e-0930Show/hide
Query:  LLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKKMMLA
        ++   T++ F+ D ++F +   + F  LD + +G+LS  E+ + L ++   E+    +V P  +E  +VY ++F +F  D   K +  + +AE   ++ A
Subjt:  LLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKKMMLA

Query:  MANGIGFLPIQMVLEENSFLKKAVERESNQ
        MA GIG  P+ MV+  +  + KAV  ES Q
Subjt:  MANGIGFLPIQMVLEENSFLKKAVERESNQ

AT2G44310.1 Calcium-binding EF-hand family protein1.4e-3247.79Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK
        M V L+DG+T+ +FV+DEE F  ++ ERF  LD N DGVLS  E+ +  +S+R+ E+HFG+DV    +EL+++Y S+F +FD D +G VDL+EF +E KK
Subjt:  MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKK

Query:  MMLAMANGIGFLPIQMVL--EENSFLKKAVERESNQ
        ++LA+A+G+G  PI MVL  ++++FLKKA + E+++
Subjt:  MMLAMANGIGFLPIQMVL--EENSFLKKAVERESNQ

AT4G38810.2 Calcium-binding EF-hand family protein2.0e-0725.6Show/hide
Query:  ELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKKMML
        ++LDG+ IV  VE+E+ F   + ++F  LD + DG LS  E+   +  +       G+  +    +   +Y  +  +F      KV   EF      ++L
Subjt:  ELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKKMML

Query:  AMANGIGFLPIQMVLEENSFLKKAV
         MA G+   PI ++  +   L + V
Subjt:  AMANGIGFLPIQMVLEENSFLKKAV

AT5G28830.1 calcium-binding EF hand family protein9.4e-0521.88Show/hide
Query:  VELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKKMM
        V +LDG  +  F+EDE+ F+      F  LD    G L   E+ + L        H G+++   P     +   +  + D D + ++   +F    ++++
Subjt:  VELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKKMM

Query:  LAMANGIGFLPIQMVLEENSFLKKAVER
          +A+ +   PI +VL    F    + +
Subjt:  LAMANGIGFLPIQMVLEENSFLKKAVER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTAGAACTTTTAGATGGTGCCACAATTGTCAACTTTGTGGAAGACGAAGAAGCTTTTAGTGCGACAATTAGAGAGCGATTTGATCATCTTGACACCAACAGCGA
TGGCGTTCTTTCTTATGGAGAGATGTTGAGGGAGTTGCAGAGTCTTAGGATGTTCGAGACCCATTTTGGGATCGATGTGAAACCCGACCCAAATGAGCTTTCTTCGGTCT
ATGGCTCGTTGTTTTTGCAGTTCGATAGGGACTGCAATGGGAAAGTTGATTTAGATGAGTTCATGGCGGAAACTAAGAAGATGATGCTGGCAATGGCGAATGGAATAGGA
TTTTTGCCTATTCAAATGGTGCTGGAAGAAAACAGCTTCTTGAAGAAAGCTGTGGAGAGAGAATCCAACCAGAGTGGCTGCTTTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGTAGAACTTTTAGATGGTGCCACAATTGTCAACTTTGTGGAAGACGAAGAAGCTTTTAGTGCGACAATTAGAGAGCGATTTGATCATCTTGACACCAACAGCGA
TGGCGTTCTTTCTTATGGAGAGATGTTGAGGGAGTTGCAGAGTCTTAGGATGTTCGAGACCCATTTTGGGATCGATGTGAAACCCGACCCAAATGAGCTTTCTTCGGTCT
ATGGCTCGTTGTTTTTGCAGTTCGATAGGGACTGCAATGGGAAAGTTGATTTAGATGAGTTCATGGCGGAAACTAAGAAGATGATGCTGGCAATGGCGAATGGAATAGGA
TTTTTGCCTATTCAAATGGTGCTGGAAGAAAACAGCTTCTTGAAGAAAGCTGTGGAGAGAGAATCCAACCAGAGTGGCTGCTTTAATTAA
Protein sequenceShow/hide protein sequence
MSVELLDGATIVNFVEDEEAFSATIRERFDHLDTNSDGVLSYGEMLRELQSLRMFETHFGIDVKPDPNELSSVYGSLFLQFDRDCNGKVDLDEFMAETKKMMLAMANGIG
FLPIQMVLEENSFLKKAVERESNQSGCFN