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Tan0016418 (gene) of Snake gourd v1 genome

Gene IDTan0016418
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionphotosystem II reaction center protein H
Genome locationContig00124:266647..266868
RNA-Seq ExpressionTan0016418
SyntenyTan0016418
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0050821 - protein stabilization (biological process)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0042301 - phosphate ion binding (molecular function)
InterPro domainsIPR001056 - Photosystem II reaction centre protein H
IPR036863 - Photosystem II reaction centre protein H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ALO21758.1 PsbH [Cucurbita argyrosperma]7.1e-3097.26Show/hide
Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
        MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLF IFLSIILEIYNSSILL+GISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
YP_009317415.1 photosystem II protein H [Coccinia grandis]5.4e-3097.26Show/hide
Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
        MATQTV+DSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILL+GISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
YP_009447479.1 photosystem II protein H [Cucurbita maxima]2.4e-3098.63Show/hide
Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
        MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILL+GISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
YP_009456090.1 photosystem II protein H [Momordica charantia]9.3e-3097.26Show/hide
Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
        MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILL+GIS N
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
YP_009753118.1 photosystem II subunit H [Corallocarpus boehmii]9.3e-3097.26Show/hide
Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
        MATQTVEDSSRSGPRRTIVG+LLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILL+GISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
TrEMBL top hitse value%identityAlignment
A0A0S2IGM9 Photosystem II reaction center protein H1.2e-3098.63Show/hide
Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
        MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILL+GISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
A0A346QN61 Photosystem II reaction center protein H1.2e-3098.63Show/hide
Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
        MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILL+GISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
A0A410HFB6 Photosystem II reaction center protein H1.2e-3098.63Show/hide
Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
        MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILL+GISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
A0A6H0ERB6 Photosystem II reaction center protein H1.2e-3098.63Show/hide
Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
        MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILL+GISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
A0A6M3RU29 Photosystem II reaction center protein H1.2e-3098.63Show/hide
Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
        MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILL+GISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
SwissProt top hitse value%identityAlignment
Q2PMQ6 Photosystem II reaction center protein H1.8e-3193.15Show/hide
Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
        MATQTVED+SRSGPRRT+VGDLLKPLNSEYGKVAPGWGTTPLMGVAM LFAIFLSIILEIYNSSILL+GIS N
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
Q3C1M6 Photosystem II reaction center protein H1.5e-3090.41Show/hide
Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
        MATQTVE+SSRSGPRRT VGDLLKPLNSEYGKVAPGWGTTPLMGVAM LFA+FLSIILEIYNSS+LL+GIS N
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
Q49KW9 Photosystem II reaction center protein H6.7e-3191.78Show/hide
Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
        MATQTVE SSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAM LFA+FLSIILEIYNSS+LL+GIS N
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
Q4VZI9 Photosystem II reaction center protein H3.9e-3191.78Show/hide
Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
        MATQTV+DSS+SGPRRT+VGDLLKPLNSEYGKVAPGWGTTPLMGVAM LFAIFL IILEIYNSSILL+GISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
Q7FNS3 Photosystem II reaction center protein H1.5e-3090.41Show/hide
Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
        MATQTVE+SSRSGPRRT VGDLLKPLNSEYGKVAPGWGTTPLMGVAM LFA+FLSIILEIYNSS+LL+GIS N
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
Arabidopsis top hitse value%identityAlignment
ATCG00710.1 photosystem II reaction center protein H1.2e-3089.04Show/hide
Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN
        MATQTVEDSSRSGPR T VG LLKPLNSEYGKVAPGWGTTPLMGVAM LFA+FLSIILEIYNSS+LL+GIS N
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACACAAACCGTTGAGGATAGTTCTAGATCTGGGCCAAGACGCACTATTGTAGGGGATTTATTGAAACCATTGAATTCGGAATATGGTAAAGTGGCTCCTGGGTG
GGGAACTACGCCTTTGATGGGTGTCGCGATGGGTCTATTTGCGATATTCCTATCTATTATTTTGGAGATTTATAATTCTTCCATTTTACTGAACGGAATTTCAAGCAATT
AG
mRNA sequenceShow/hide mRNA sequence
ATGGCTACACAAACCGTTGAGGATAGTTCTAGATCTGGGCCAAGACGCACTATTGTAGGGGATTTATTGAAACCATTGAATTCGGAATATGGTAAAGTGGCTCCTGGGTG
GGGAACTACGCCTTTGATGGGTGTCGCGATGGGTCTATTTGCGATATTCCTATCTATTATTTTGGAGATTTATAATTCTTCCATTTTACTGAACGGAATTTCAAGCAATT
AG
Protein sequenceShow/hide protein sequence
MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLNGISSN