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Tan0016422 (gene) of Snake gourd v1 genome

Gene IDTan0016422
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSel1-like protein
Genome locationLG08:73613340..73616426
RNA-Seq ExpressionTan0016422
SyntenyTan0016422
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442362.1 PREDICTED: uncharacterized protein LOC103486254 [Cucumis melo]3.6e-4898Show/hide
Query:  MEISGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTE LNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS

XP_011651845.1 uncharacterized protein LOC101206121 [Cucumis sativus]7.9e-4897Show/hide
Query:  MEISGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISG TE LNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS

XP_022157335.1 uncharacterized protein LOC111024062 [Momordica charantia]4.6e-4898Show/hide
Query:  MEISGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTE L+RVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
Subjt:  MEISGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS

XP_022934323.1 uncharacterized protein LOC111441521 [Cucurbita moschata]5.1e-4795Show/hide
Query:  MEISGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTE L+RVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS

XP_022971526.1 uncharacterized protein LOC111470221 [Cucurbita maxima]1.1e-4694Show/hide
Query:  MEISGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTE LNRVPLSEVVSDCVKRWFKDTL EAK GDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDD+T DS
Subjt:  MEISGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS

TrEMBL top hitse value%identityAlignment
A0A0A0LCP0 Uncharacterized protein3.8e-4897Show/hide
Query:  MEISGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISG TE LNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS

A0A1S3B5I4 uncharacterized protein LOC1034862541.7e-4898Show/hide
Query:  MEISGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTE LNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS

A0A5D3DNP0 Sel1-like protein1.7e-4898Show/hide
Query:  MEISGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTE LNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS

A0A6J1DSS4 uncharacterized protein LOC1110240622.2e-4898Show/hide
Query:  MEISGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTE L+RVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
Subjt:  MEISGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS

A0A6J1J881 uncharacterized protein LOC1114821712.5e-4795Show/hide
Query:  MEISGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTE L+RVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38450.1 CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597)7.4e-3682.93Show/hide
Query:  VPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD
        VPLS VVSDC KRWFKDTL+EAKAG+I MQVL+GQMYYSGYGVP+DA+KGR+W+TKASR RSSVWKV DK PGYNASDSDS+
Subjt:  VPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD

AT5G05360.1 unknown protein5.7e-3670.65Show/hide
Query:  SGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDD
        + G++ +NRVPL++VV DCV+RWF+DTLKEAK+GD+ MQVLVGQMY SGYG+P+D  KGR W+ KASR+RSS W+VSDK PGYNASDSDS+D
Subjt:  SGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDD

AT5G05360.2 unknown protein1.1e-3167.86Show/hide
Query:  SGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN
        + G++ +NRVPL++VV DCV+RWF+DTLKEAK+GD+ MQVLVGQMY SGYG+P+D  KGR W+ KASR+RSS W+VSDK PG N
Subjt:  SGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTAGCGGAGGAACAGAAGTCTTGAATCGCGTTCCGTTATCGGAAGTTGTTTCTGATTGCGTCAAAAGATGGTTTAAGGACACTTTGAAAGAGGCAAAAGCTGG
GGATATTAACATGCAGGTTTTGGTAGGTCAAATGTATTATAGCGGTTATGGCGTTCCTAGAGATGCTCAGAAGGGGAGAATTTGGATGACTAAAGCATCAAGAAGTCGAT
CCTCGGTCTGGAAAGTTAGTGATAAACATCCAGGTTATAATGCTAGTGATTCAGATTCAGACGACTTGACTCGTGATTCTTAA
mRNA sequenceShow/hide mRNA sequence
CCTTCTCAATTTTCAAAATCTTCCAAACGCTCAACCTTTTTCCTGGGTTTTTCCTTTTCCTTTTCCTTATTTTTAACCAGCAAGAGGACAACAGTTTTCGTACCAGCAAG
AAGTAAGAATCTCGCCAAAATCACAAAGTCAAGGTTTCGGTTCATTAATCGAAGCCCGTTGAAGTTCAAATAGAGATGGAGATTAGCGGAGGAACAGAAGTCTTGAATCG
CGTTCCGTTATCGGAAGTTGTTTCTGATTGCGTCAAAAGATGGTTTAAGGACACTTTGAAAGAGGCAAAAGCTGGGGATATTAACATGCAGGTTTTGGTAGGTCAAATGT
ATTATAGCGGTTATGGCGTTCCTAGAGATGCTCAGAAGGGGAGAATTTGGATGACTAAAGCATCAAGAAGTCGATCCTCGGTCTGGAAAGTTAGTGATAAACATCCAGGT
TATAATGCTAGTGATTCAGATTCAGACGACTTGACTCGTGATTCTTAACTACACCAGTGCTCTATGTCATGTCAAAACAACCACTGGTATCTTCAGGACAACCTGTATTT
TGGCAATTTAACTTATTGTTCTATGGCTCTTATGTGTGACATCAATTATTCTCTGTTGCACATGTGAAAATGTACTAGTAACAAAGAGAAAATTGGTAAAAGATGACGTT
TTTGCTTGCTGCTTTAGGATTGATCTTTTATTGTTTATGATATGATATGATATACCTTTATTGTTGAGTTGTTAAAACAAGTGCCTTCAGCTATAAGTAATTGAAGGTTT
ATAACTGTACACATTTTGTTCCTGCATCCGTATCCACCATATATAAACACGGGTGAATCTAGTTTTTCTCTCCTACATCCTAGGTCTAGCCTCCAAGCTAAACGGAGCAT
AACTCAACTGGTTAAAGAATATATCTTTAATCAGAAGTTCAGAAGTTCGAGTCTCCGCCCTCACATCTTGTTGAACTCAAAGAGTTATAGGTCATAAATGCCGTTAACAG
AGGGATCTTCTACCTTAGAGTTTCCATGTCACTCCTTTGTTGTTCAAGATGCTAGACATCCATTGGGTGTTCGTGTTTAGGTTATGCAAATCTTGCTGAAGATTCTAAAG
GATGGCTCTCTCTTGTTCTTTTGTTTTGCGCACACAAAACTTTTTTTTTCCTTATAACTAGCAATTTTTGGTTTCTGTTTAATTAAACCCTTATTTGTCATGGAATAAAA
TTTGATTATCTTTTAGACTTATACTGTACTTCAAATCTAGTTTCCACTAAATTGCTGGCAGGAACAATTGTTTTTTCCCTTTTTTCTAAGACAACTTAGCTGTATGATGA
AAGGATGGCTATGTTCTAAAATGCTGCAGTCCTTTGGATTTGCTTATTACAGGATGTGCTTTTCACTGTGGAAACTCTACTTGCTCAGCTTATATTTGTAGCTGCGAAGA
ATTTCGTGTACTTCCTTCCTAAATGTTGGATTTGATGGATGTAATATGCTTTGATTTTACCTTTACTCTGCAAACAATTTGTGGCACTTCCCTGTGGTTAAATAGGCTAA
ATCTTATATCCATTTTTCATTTTCTGTTTAGGTTACCGCTGTTCACTGTCTGCAGGAGATTTTTCATTTGATTTTTGCATAAATGTCAAATTTTGAACTTTTTTTAGTTG
CTATTATCAAACTCCCTTTC
Protein sequenceShow/hide protein sequence
MEISGGTEVLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS