; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016450 (gene) of Snake gourd v1 genome

Gene IDTan0016450
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionB3 domain-containing protein
Genome locationLG07:13343321..13343895
RNA-Seq ExpressionTan0016450
SyntenyTan0016450
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152777.2 putative B3 domain-containing protein At2g27410 [Cucumis sativus]4.1e-3551.27Show/hide
Query:  ERTSRKRKKNNN----GFDLPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL---------EVLLRQQAGKD
        +R +R++  NNN        PKKE+++++VFS TIEM   LRDRI E+G  +IQ   QK+LQDTD+NKNHGRLLIP KKL         + LL+Q   +D
Subjt:  ERTSRKRKKNNN----GFDLPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL---------EVLLRQQAGKD

Query:  QKNKNGMKVLIIDPLLRETQ-------------------------QNSLESGDYIQLWSFRK-NSF-----AAETVTSNLCFALVKLDISEGIFKFI
         KNKNGM VLIIDP LR  Q                         +NSLESGDYIQLWSFR  N+F     A   + SNLCFA VKLDISEGIFKFI
Subjt:  QKNKNGMKVLIIDPLLRETQ-------------------------QNSLESGDYIQLWSFRK-NSF-----AAETVTSNLCFALVKLDISEGIFKFI

XP_008445565.1 PREDICTED: B3 domain-containing protein At3g25182-like [Cucumis melo]3.0e-3854.87Show/hide
Query:  RTSRKRKKNNN--GFD-LPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL---------EVLLRQQAGKDQK
        + S KRKKN+N  G D  PKKE+++++VFS TIEMS  LRDRI E+   DIQ V QK+LQDTD+NKNHGRLLIP KKL         + LL+Q   +D K
Subjt:  RTSRKRKKNNN--GFD-LPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL---------EVLLRQQAGKDQK

Query:  NKNGMKVLIIDPLLRE-------------------------TQQNSLESGDYIQLWSFRKNSF------AAETVTSNLCFALVKLDISEGIFKFI
        NKNGM VLIIDP LR                           Q+NSLESGDYIQLWSFR N+       +   V SNLCFALVKLDISEGIFKFI
Subjt:  NKNGMKVLIIDPLLRE-------------------------TQQNSLESGDYIQLWSFRKNSF------AAETVTSNLCFALVKLDISEGIFKFI

XP_022144152.1 B3 domain-containing protein At2g31420-like [Momordica charantia]1.4e-3556.21Show/hide
Query:  KKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL--------EVLLRQQAGKDQKNKNGMKVLIIDPLLRET---
        KK KQ E+VFS+TIEM   LRDRI E+G  DIQIV+QK+LQDTDLN+NHGRL IP KKL        E  L  Q  + Q NKNG+  LI+DP LRE+   
Subjt:  KKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL--------EVLLRQQAGKDQKNKNGMKVLIIDPLLRET---

Query:  ----------------------QQNSLESGDYIQLWSFRKNSFAAETVTSNLCFALVKLDISEGIFKFI
                              Q+NSLESGD+IQLWSFRKNS    T T +LCFALVKLDISEGIF+FI
Subjt:  ----------------------QQNSLESGDYIQLWSFRKNSFAAETVTSNLCFALVKLDISEGIFKFI

XP_022997537.1 B3 domain-containing protein At1g05920-like [Cucurbita maxima]6.6e-3347.25Show/hide
Query:  RKKNNNGFDLPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL----------EVLLRQQAGKDQKNKNGMKV
        ++KN +  D P+++++RE+VFS+T+EM  +LR RI  +G +D+QIV+QK+LQ++D NKNHGRLLIPTKKL          E++++++  + ++ + GM+V
Subjt:  RKKNNNGFDLPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL----------EVLLRQQAGKDQKNKNGMKV

Query:  LIIDPLLRET-------------------------QQNSLESGDYIQLWSFRKNSFAAETVTSNLCFALVKLDISEGIFKFI
         IID  LRE+                         +QNSLESGDYIQLWSFR N+ A      NLCFALVKLDISEGIF FI
Subjt:  LIIDPLLRET-------------------------QQNSLESGDYIQLWSFRKNSFAAETVTSNLCFALVKLDISEGIFKFI

XP_023546349.1 B3 domain-containing protein At1g05920-like [Cucurbita pepo subsp. pepo]3.0e-3347.25Show/hide
Query:  RKKNNNGFDLPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL----------EVLLRQQAGKDQKNKNGMKV
        ++KN +  D PK++++RE+VFS+T+EM  +LR+RI  +G +D+Q+V QK+LQ++D NKNHGRLLIPTKKL          E++++++  + ++ + GM+V
Subjt:  RKKNNNGFDLPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL----------EVLLRQQAGKDQKNKNGMKV

Query:  LIIDPLLRET-------------------------QQNSLESGDYIQLWSFRKNSFAAETVTSNLCFALVKLDISEGIFKFI
         IID  LRET                         +QNSLESGDYIQLWSFR N+ A       LCFALVKLDISEGIF FI
Subjt:  LIIDPLLRET-------------------------QQNSLESGDYIQLWSFRKNSFAAETVTSNLCFALVKLDISEGIFKFI

TrEMBL top hitse value%identityAlignment
A0A1S3BCJ5 B3 domain-containing protein At3g25182-like1.5e-3854.87Show/hide
Query:  RTSRKRKKNNN--GFD-LPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL---------EVLLRQQAGKDQK
        + S KRKKN+N  G D  PKKE+++++VFS TIEMS  LRDRI E+   DIQ V QK+LQDTD+NKNHGRLLIP KKL         + LL+Q   +D K
Subjt:  RTSRKRKKNNN--GFD-LPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL---------EVLLRQQAGKDQK

Query:  NKNGMKVLIIDPLLRE-------------------------TQQNSLESGDYIQLWSFRKNSF------AAETVTSNLCFALVKLDISEGIFKFI
        NKNGM VLIIDP LR                           Q+NSLESGDYIQLWSFR N+       +   V SNLCFALVKLDISEGIFKFI
Subjt:  NKNGMKVLIIDPLLRE-------------------------TQQNSLESGDYIQLWSFRKNSF------AAETVTSNLCFALVKLDISEGIFKFI

A0A5A7VHB3 B3 domain-containing protein1.5e-3854.87Show/hide
Query:  RTSRKRKKNNN--GFD-LPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL---------EVLLRQQAGKDQK
        + S KRKKN+N  G D  PKKE+++++VFS TIEMS  LRDRI E+   DIQ V QK+LQDTD+NKNHGRLLIP KKL         + LL+Q   +D K
Subjt:  RTSRKRKKNNN--GFD-LPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL---------EVLLRQQAGKDQK

Query:  NKNGMKVLIIDPLLRE-------------------------TQQNSLESGDYIQLWSFRKNSF------AAETVTSNLCFALVKLDISEGIFKFI
        NKNGM VLIIDP LR                           Q+NSLESGDYIQLWSFR N+       +   V SNLCFALVKLDISEGIFKFI
Subjt:  NKNGMKVLIIDPLLRE-------------------------TQQNSLESGDYIQLWSFRKNSF------AAETVTSNLCFALVKLDISEGIFKFI

A0A6J1CSV9 B3 domain-containing protein At2g31420-like6.9e-3656.21Show/hide
Query:  KKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL--------EVLLRQQAGKDQKNKNGMKVLIIDPLLRET---
        KK KQ E+VFS+TIEM   LRDRI E+G  DIQIV+QK+LQDTDLN+NHGRL IP KKL        E  L  Q  + Q NKNG+  LI+DP LRE+   
Subjt:  KKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL--------EVLLRQQAGKDQKNKNGMKVLIIDPLLRET---

Query:  ----------------------QQNSLESGDYIQLWSFRKNSFAAETVTSNLCFALVKLDISEGIFKFI
                              Q+NSLESGD+IQLWSFRKNS    T T +LCFALVKLDISEGIF+FI
Subjt:  ----------------------QQNSLESGDYIQLWSFRKNSFAAETVTSNLCFALVKLDISEGIFKFI

A0A6J1HD06 B3 domain-containing protein At1g05920-like1.2e-3246.15Show/hide
Query:  RKKNNNGFDLPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL----------EVLLRQQAGKDQKNKNGMKV
        ++KN +  D P+++++RE+VFS+T+EM  +LR RI  +G +D+Q+V QK+LQ++D NKNHGRLLIPTKKL          E++++++  + ++ + GM+V
Subjt:  RKKNNNGFDLPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL----------EVLLRQQAGKDQKNKNGMKV

Query:  LIIDPLLRET-------------------------QQNSLESGDYIQLWSFRKNSFAAETVTSNLCFALVKLDISEGIFKFI
         IID  LRE+                         +QNSLESGDYIQLWSFR N+ A      +LCFALVKLDISEGIF FI
Subjt:  LIIDPLLRET-------------------------QQNSLESGDYIQLWSFRKNSFAAETVTSNLCFALVKLDISEGIFKFI

A0A6J1K5B4 B3 domain-containing protein At1g05920-like3.2e-3347.25Show/hide
Query:  RKKNNNGFDLPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL----------EVLLRQQAGKDQKNKNGMKV
        ++KN +  D P+++++RE+VFS+T+EM  +LR RI  +G +D+QIV+QK+LQ++D NKNHGRLLIPTKKL          E++++++  + ++ + GM+V
Subjt:  RKKNNNGFDLPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL----------EVLLRQQAGKDQKNKNGMKV

Query:  LIIDPLLRET-------------------------QQNSLESGDYIQLWSFRKNSFAAETVTSNLCFALVKLDISEGIFKFI
         IID  LRE+                         +QNSLESGDYIQLWSFR N+ A      NLCFALVKLDISEGIF FI
Subjt:  LIIDPLLRET-------------------------QQNSLESGDYIQLWSFRKNSFAAETVTSNLCFALVKLDISEGIFKFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATTGGAAAGAACAAGCCGGAAGAGGAAGAAGAACAACAACGGTTTTGATTTGCCAAAGAAGGAGAAGCAAAGGGAGATCGTGTTTTCGACGACGATCGAGATGTC
GACGTCGCTGAGAGATCGGATTGTCGAGATCGGCGCCTCCGACATCCAAATTGTGGTTCAAAAGAAACTGCAAGACACCGATCTCAACAAGAACCACGGTCGATTATTGA
TTCCGACCAAGAAACTTGAAGTTTTGTTGAGGCAACAAGCTGGTAAAGATCAGAAAAACAAGAATGGAATGAAGGTGCTCATAATCGATCCTCTTTTGAGAGAGACGCAA
CAAAATTCATTAGAAAGTGGAGATTATATCCAACTTTGGAGTTTTAGAAAGAATAGTTTTGCTGCTGAAACAGTGACCTCTAATCTTTGTTTTGCCTTAGTTAAGCTTGA
TATCTCTGAGGGAATCTTTAAATTTATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATTGGAAAGAACAAGCCGGAAGAGGAAGAAGAACAACAACGGTTTTGATTTGCCAAAGAAGGAGAAGCAAAGGGAGATCGTGTTTTCGACGACGATCGAGATGTC
GACGTCGCTGAGAGATCGGATTGTCGAGATCGGCGCCTCCGACATCCAAATTGTGGTTCAAAAGAAACTGCAAGACACCGATCTCAACAAGAACCACGGTCGATTATTGA
TTCCGACCAAGAAACTTGAAGTTTTGTTGAGGCAACAAGCTGGTAAAGATCAGAAAAACAAGAATGGAATGAAGGTGCTCATAATCGATCCTCTTTTGAGAGAGACGCAA
CAAAATTCATTAGAAAGTGGAGATTATATCCAACTTTGGAGTTTTAGAAAGAATAGTTTTGCTGCTGAAACAGTGACCTCTAATCTTTGTTTTGCCTTAGTTAAGCTTGA
TATCTCTGAGGGAATCTTTAAATTTATATAA
Protein sequenceShow/hide protein sequence
MALERTSRKRKKNNNGFDLPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKLEVLLRQQAGKDQKNKNGMKVLIIDPLLRETQ
QNSLESGDYIQLWSFRKNSFAAETVTSNLCFALVKLDISEGIFKFI