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Tan0016453 (gene) of Snake gourd v1 genome

Gene IDTan0016453
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG06:51055391..51065669
RNA-Seq ExpressionTan0016453
SyntenyTan0016453
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151643.1 uncharacterized protein LOC111019551 [Momordica charantia]4.9e-0447.14Show/hide
Query:  NPSQEGEDDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFP-YMLCKVELQDGD
        NPS+ G+DDMNQ   + +P  PITRSRAK+LQ A  +HIQ +VS      ED G    Y  C++ ++D D
Subjt:  NPSQEGEDDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFP-YMLCKVELQDGD

XP_022158199.1 uncharacterized protein LOC111024737 [Momordica charantia]8.1e-1545.16Show/hide
Query:  DMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCGDGFNENLHARVIQVVLIVPLVELNPSQEGEDDMNQGPPIVMPEGPI
        D+NQG  IVMP+GPITRSR+KK  Q      Q +     E + D   +   L GDG++                   NPSQE EDD+NQG  IVMP+GPI
Subjt:  DMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCGDGFNENLHARVIQVVLIVPLVELNPSQEGEDDMNQGPPIVMPEGPI

Query:  TRSRAKKLQQALITHIQAMVSSKE
        TRSR+KKLQQAL++++Q +    E
Subjt:  TRSRAKKLQQALITHIQAMVSSKE

XP_022159097.1 uncharacterized protein LOC111025539 [Momordica charantia]5.8e-0553.03Show/hide
Query:  NPSQEGEDDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDV-GVFPYMLCKVEL
        NPS+ GEDDMNQ   + +P GPITRSRAK+LQ A  +HIQA VSS     ED  G   Y  C++ +
Subjt:  NPSQEGEDDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDV-GVFPYMLCKVEL

XP_038900633.1 uncharacterized protein LOC120087799 [Benincasa hispida]1.7e-1770.27Show/hide
Query:  NPSQEGEDDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCKVELQDGDALNAF
        NPSQE EDD N+G  I+M +G I RSRAKKL QALITHIQAMV+S ++++EDV V  YMLCKVE QD DALNAF
Subjt:  NPSQEGEDDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCKVELQDGDALNAF

TrEMBL top hitse value%identityAlignment
A0A2N9E446 Uncharacterized protein1.8e-0434.38Show/hide
Query:  DMNQG-----PPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCGDGFNENLHARVIQVVLIVPLVELNPSQEGEDDMNQGPP---
        D NQG      P+ +P+GPITRSRAKK+++A+    Q +V S     ++    P +  G    E +   +IQ V            +  +D NQG P   
Subjt:  DMNQG-----PPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCGDGFNENLHARVIQVVLIVPLVELNPSQEGEDDMNQGPP---

Query:  --IVMPEGPITRSRAKKLQQALITHIQA
          + +P GPITRSRAKK+++A+   +Q+
Subjt:  --IVMPEGPITRSRAKKLQQALITHIQA

A0A2N9GT99 Integrase catalytic domain-containing protein2.5e-0634.38Show/hide
Query:  DMNQG-----PPIVMPEGPITRSRAKKLQQALITHIQAM--VSSKEEVLEDVGVFPYMLCG----DG-----FNENLHARVI----QVVLIVPLVELNPS
        D NQG      P+ +P+GPITRSRAKK+++A+   +Q+    +SK   ++ V + P  + G    DG       ++LH RV+    +V     + +L+P 
Subjt:  DMNQG-----PPIVMPEGPITRSRAKKLQQALITHIQAM--VSSKEEVLEDVGVFPYMLCG----DG-----FNENLHARVI----QVVLIVPLVELNPS

Query:  QEGED-----------DMNQG-----PPIVMPEGPITRSRAKKLQQALITHIQAMVSSKE
          GED           D NQG      P+ +P+GPITRSRAKK+++A+    Q +V  K+
Subjt:  QEGED-----------DMNQG-----PPIVMPEGPITRSRAKKLQQALITHIQAMVSSKE

A0A2N9HSZ8 Uncharacterized protein2.5e-0635.07Show/hide
Query:  DMNQG-----PPIVMPEGPITRSRAKKLQQALITHIQAMV------SSKEEVLEDVGVFPYMLCGDGFNENLHARVIQVVLIVPLVELNPSQEGEDDMNQ
        D NQG      P+ +P+GPITRSRAKK+++A+   +Q  +       SK   L   G  P+ +      E ++    +V L       NP +E  +D NQ
Subjt:  DMNQG-----PPIVMPEGPITRSRAKKLQQALITHIQAMV------SSKEEVLEDVGVFPYMLCGDGFNENLHARVIQVVLIVPLVELNPSQEGEDDMNQ

Query:  G-----PPIVMPEGPITRSRAKKLQQALITHIQA
        G      P+ +P+GPITRSRAKK+++A+   +Q+
Subjt:  G-----PPIVMPEGPITRSRAKKLQQALITHIQA

A0A6J1DYP6 uncharacterized protein LOC1110247373.9e-1545.16Show/hide
Query:  DMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCGDGFNENLHARVIQVVLIVPLVELNPSQEGEDDMNQGPPIVMPEGPI
        D+NQG  IVMP+GPITRSR+KK  Q      Q +     E + D   +   L GDG++                   NPSQE EDD+NQG  IVMP+GPI
Subjt:  DMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCGDGFNENLHARVIQVVLIVPLVELNPSQEGEDDMNQGPPIVMPEGPI

Query:  TRSRAKKLQQALITHIQAMVSSKE
        TRSR+KKLQQAL++++Q +    E
Subjt:  TRSRAKKLQQALITHIQAMVSSKE

A0A6J1DYV9 uncharacterized protein LOC1110255392.8e-0553.03Show/hide
Query:  NPSQEGEDDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDV-GVFPYMLCKVEL
        NPS+ GEDDMNQ   + +P GPITRSRAK+LQ A  +HIQA VSS     ED  G   Y  C++ +
Subjt:  NPSQEGEDDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDV-GVFPYMLCKVEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCTCTATTATCTTGTTTCTTTGCATTTCTTGTGTTTAGATTTGCATGCTAGGATCATTCAAGTAGCGTTGATCAAACTACTTGTGGATGATTCGAATCTTGAGTT
TAGAAACAAGTTTTCTCTACTCTTGATCTTGATCATCAAGTTACAACCTGATATGAACCAAGGACCACCTATTGTCATGCCTGAAGGTCCAATTACAAGGTCGAGAGCCA
AGAAGCTACAACAAGCTTTAATCACTCATATTCAAGCTATGGTGAGCTCAAAAGAGGAGGTTCTAGAAGATGTTGGAGTCTTTCCCTACATGTTGTGTGGAGATGGATTC
AATGAAAATTTGCATGCTAGAGTCATTCAAGTGGTGTTGATCGTACCTCTTGTGGAGCTTAATCCTTCTCAAGAGGGGGAGGATGATATGAACCAAGGACCACCTATTGT
CATGCCTGAAGGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCTTTAATCACTCATATTCAAGCTATGGTGAGCTCAAAAGAGGAGGTTCTAGAAGATGTTG
GAGTCTTTCCCTACATGTTGTGCAAAGTTGAACTTCAAGATGGAGACGCATTAAATGCATTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCTCTATTATCTTGTTTCTTTGCATTTCTTGTGTTTAGATTTGCATGCTAGGATCATTCAAGTAGCGTTGATCAAACTACTTGTGGATGATTCGAATCTTGAGTT
TAGAAACAAGTTTTCTCTACTCTTGATCTTGATCATCAAGTTACAACCTGATATGAACCAAGGACCACCTATTGTCATGCCTGAAGGTCCAATTACAAGGTCGAGAGCCA
AGAAGCTACAACAAGCTTTAATCACTCATATTCAAGCTATGGTGAGCTCAAAAGAGGAGGTTCTAGAAGATGTTGGAGTCTTTCCCTACATGTTGTGTGGAGATGGATTC
AATGAAAATTTGCATGCTAGAGTCATTCAAGTGGTGTTGATCGTACCTCTTGTGGAGCTTAATCCTTCTCAAGAGGGGGAGGATGATATGAACCAAGGACCACCTATTGT
CATGCCTGAAGGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCTTTAATCACTCATATTCAAGCTATGGTGAGCTCAAAAGAGGAGGTTCTAGAAGATGTTG
GAGTCTTTCCCTACATGTTGTGCAAAGTTGAACTTCAAGATGGAGACGCATTAAATGCATTCTAA
Protein sequenceShow/hide protein sequence
MALYYLVSLHFLCLDLHARIIQVALIKLLVDDSNLEFRNKFSLLLILIIKLQPDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCGDGF
NENLHARVIQVVLIVPLVELNPSQEGEDDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCKVELQDGDALNAF