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Tan0016458 (gene) of Snake gourd v1 genome

Gene IDTan0016458
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCalcium-binding EF hand family protein
Genome locationLG09:35535779..35536186
RNA-Seq ExpressionTan0016458
SyntenyTan0016458
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ95513.1 calcium-binding EF hand family protein [Cucumis melo var. makuwa]1.7e-4069.53Show/hide
Query:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSLEFEVLDPMDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQG
        MSVAFLNDTTVTNFINDTK FDD V+E FKKLD D D  LN +E R GF +Q LE E++DP+DD+ EVV HKF VEK+GGI + EFKS++RDILLAMA G
Subjt:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSLEFEVLDPMDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQG

Query:  IGNMPIQVALQQDGFLMKAFEHEMEKQK
        IGN P+QVALQQD FLMKA E E  K++
Subjt:  IGNMPIQVALQQDGFLMKAFEHEMEKQK

XP_004142569.1 uncharacterized protein LOC101222885 [Cucumis sativus]3.0e-4271.09Show/hide
Query:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSLEFEVLDPMDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQG
        MSVAFLNDTTVTNFINDTK FDD V+E FKKLD D D  LN +E RVGF +  LEFE++DP+DD+ EVV HKF+VEK+GGI + EFKS+IRDILLAMAQG
Subjt:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSLEFEVLDPMDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQG

Query:  IGNMPIQVALQQDGFLMKAFEHEMEKQK
        IGN P+QVALQQD FLMKA E E  +++
Subjt:  IGNMPIQVALQQDGFLMKAFEHEMEKQK

XP_008462771.1 PREDICTED: uncharacterized protein LOC103501058 [Cucumis melo]9.7e-4170.31Show/hide
Query:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSLEFEVLDPMDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQG
        MSVAFLNDTTVTNFINDTK FDD V+E FKKLD D D  LN +E R GF +Q LE E++DP+DD+ EVV HKF VEK+GGI + EFKS+IRDILLAMA G
Subjt:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSLEFEVLDPMDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQG

Query:  IGNMPIQVALQQDGFLMKAFEHEMEKQK
        IGN P+QVALQQD FLMKA E E  K++
Subjt:  IGNMPIQVALQQDGFLMKAFEHEMEKQK

XP_010090267.1 uncharacterized protein LOC21389613 [Morus notabilis]1.3e-2143.08Show/hide
Query:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSLEFEVLDP----MDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLA
        M +A LN++TVT FI D +TFD  + + F  LD D D  L+ +E RVGF        V DP     D++F+ +  +F+ ++NG I + EFKS+ ++++LA
Subjt:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSLEFEVLDP----MDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLA

Query:  MAQGIGNMPIQVALQQDGFLMKAFEHEMEK
        MA+GIG++P+Q+A+ +D FLM+A EHE+E+
Subjt:  MAQGIGNMPIQVALQQDGFLMKAFEHEMEK

XP_022158640.1 uncharacterized protein LOC111025096 [Momordica charantia]2.0e-3359.69Show/hide
Query:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSLEFEVLDPMDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQG
        MSVAFLNDTTV +FINDTK FD+ V+E F+KLD D+D +LNA+E   GF + +      DP+DD+ + V  KF VEK+GGI++ EFKS++ +ILLA+A G
Subjt:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSLEFEVLDPMDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQG

Query:  IGNMPIQVALQQDGFLMKAFEHEMEKQKN
        IGN+P+QVALQQDG LMKA EHE  K++N
Subjt:  IGNMPIQVALQQDGFLMKAFEHEMEKQKN

TrEMBL top hitse value%identityAlignment
A0A0A0LYD8 Uncharacterized protein1.5e-4271.09Show/hide
Query:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSLEFEVLDPMDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQG
        MSVAFLNDTTVTNFINDTK FDD V+E FKKLD D D  LN +E RVGF +  LEFE++DP+DD+ EVV HKF+VEK+GGI + EFKS+IRDILLAMAQG
Subjt:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSLEFEVLDPMDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQG

Query:  IGNMPIQVALQQDGFLMKAFEHEMEKQK
        IGN P+QVALQQD FLMKA E E  +++
Subjt:  IGNMPIQVALQQDGFLMKAFEHEMEKQK

A0A1S3CI80 uncharacterized protein LOC1035010584.7e-4170.31Show/hide
Query:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSLEFEVLDPMDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQG
        MSVAFLNDTTVTNFINDTK FDD V+E FKKLD D D  LN +E R GF +Q LE E++DP+DD+ EVV HKF VEK+GGI + EFKS+IRDILLAMA G
Subjt:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSLEFEVLDPMDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQG

Query:  IGNMPIQVALQQDGFLMKAFEHEMEKQK
        IGN P+QVALQQD FLMKA E E  K++
Subjt:  IGNMPIQVALQQDGFLMKAFEHEMEKQK

A0A5A7VAA7 Calcium-binding EF hand family protein4.7e-4170.31Show/hide
Query:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSLEFEVLDPMDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQG
        MSVAFLNDTTVTNFINDTK FDD V+E FKKLD D D  LN +E R GF +Q LE E++DP+DD+ EVV HKF VEK+GGI + EFKS+IRDILLAMA G
Subjt:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSLEFEVLDPMDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQG

Query:  IGNMPIQVALQQDGFLMKAFEHEMEKQK
        IGN P+QVALQQD FLMKA E E  K++
Subjt:  IGNMPIQVALQQDGFLMKAFEHEMEKQK

A0A5D3B8A7 Calcium-binding EF hand family protein8.0e-4169.53Show/hide
Query:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSLEFEVLDPMDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQG
        MSVAFLNDTTVTNFINDTK FDD V+E FKKLD D D  LN +E R GF +Q LE E++DP+DD+ EVV HKF VEK+GGI + EFKS++RDILLAMA G
Subjt:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSLEFEVLDPMDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQG

Query:  IGNMPIQVALQQDGFLMKAFEHEMEKQK
        IGN P+QVALQQD FLMKA E E  K++
Subjt:  IGNMPIQVALQQDGFLMKAFEHEMEKQK

A0A6J1DWE2 uncharacterized protein LOC1110250969.5e-3459.69Show/hide
Query:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSLEFEVLDPMDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQG
        MSVAFLNDTTV +FINDTK FD+ V+E F+KLD D+D +LNA+E   GF + +      DP+DD+ + V  KF VEK+GGI++ EFKS++ +ILLA+A G
Subjt:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSLEFEVLDPMDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQG

Query:  IGNMPIQVALQQDGFLMKAFEHEMEKQKN
        IGN+P+QVALQQDG LMKA EHE  K++N
Subjt:  IGNMPIQVALQQDGFLMKAFEHEMEKQKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein9.1e-1332.54Show/hide
Query:  LNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCN-QSLEFEVL--DPMDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQGIG
        +   T+  F++DTK+F+    + F+ LD D++ +L+  E R G  N  ++E EV   D  D+++  +  +F  +    +    F+ +I +IL AMA+GIG
Subjt:  LNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCN-QSLEFEVL--DPMDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQGIG

Query:  NMPIQVALQQDGFLMKAFEHEMEKQK
        N P+ + +  DG +MKA  HE ++ K
Subjt:  NMPIQVALQQDGFLMKAFEHEMEKQK

AT2G44310.1 Calcium-binding EF-hand family protein6.3e-1432.35Show/hide
Query:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSL-----EFEVLDPMDD---IFEVVSHKFEVEKNGGISQMEFKSIIRD
        M V  ++ +TV +F++D + F   V+ERF  LD ++D +L+  E R  F +  L       +V+ P D+   +++ +  KF+ +++G +   EF+S ++ 
Subjt:  MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSL-----EFEVLDPMDD---IFEVVSHKFEVEKNGGISQMEFKSIIRD

Query:  ILLAMAQGIGNMPIQVAL--QQDGFLMKAFEHEMEK
        I+LA+A G+G+ PI + L    D FL KA + E  K
Subjt:  ILLAMAQGIGNMPIQVAL--QQDGFLMKAFEHEMEK

AT4G38810.2 Calcium-binding EF-hand family protein1.0e-0831.15Show/hide
Query:  LNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCN----QSLEFEVLDP-MDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQG
        L+ + +   + + K FD +VE++F++LD D D  L+  E +    +      L  +   P  D I+  V ++F       +S+ EFK ++ DILL MA G
Subjt:  LNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCN----QSLEFEVLDP-MDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQG

Query:  IGNMPIQVALQQDGFLMKAFEH
        +   PI V L+ DG  +  F H
Subjt:  IGNMPIQVALQQDGFLMKAFEH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTGGCTTTTCTCAACGACACAACAGTAACAAATTTCATCAATGATACTAAGACATTTGACGATTGGGTCGAGGAGCGTTTTAAGAAGCTTGACGGGGACCGAGA
TAGCCTCCTCAATGCAGATGAATTTCGTGTCGGGTTTTGTAATCAATCGTTAGAATTCGAAGTATTAGATCCAATGGACGATATTTTTGAGGTTGTTTCTCATAAGTTTG
AAGTTGAAAAAAATGGTGGAATATCACAAATGGAGTTCAAGTCGATAATAAGAGACATTCTACTTGCCATGGCTCAAGGGATTGGAAACATGCCAATCCAAGTTGCACTT
CAACAAGATGGTTTTCTCATGAAGGCTTTTGAGCATGAAATGGAGAAACAGAAAAACTTGCATGATCCCATTGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTGGCTTTTCTCAACGACACAACAGTAACAAATTTCATCAATGATACTAAGACATTTGACGATTGGGTCGAGGAGCGTTTTAAGAAGCTTGACGGGGACCGAGA
TAGCCTCCTCAATGCAGATGAATTTCGTGTCGGGTTTTGTAATCAATCGTTAGAATTCGAAGTATTAGATCCAATGGACGATATTTTTGAGGTTGTTTCTCATAAGTTTG
AAGTTGAAAAAAATGGTGGAATATCACAAATGGAGTTCAAGTCGATAATAAGAGACATTCTACTTGCCATGGCTCAAGGGATTGGAAACATGCCAATCCAAGTTGCACTT
CAACAAGATGGTTTTCTCATGAAGGCTTTTGAGCATGAAATGGAGAAACAGAAAAACTTGCATGATCCCATTGGATAG
Protein sequenceShow/hide protein sequence
MSVAFLNDTTVTNFINDTKTFDDWVEERFKKLDGDRDSLLNADEFRVGFCNQSLEFEVLDPMDDIFEVVSHKFEVEKNGGISQMEFKSIIRDILLAMAQGIGNMPIQVAL
QQDGFLMKAFEHEMEKQKNLHDPIG