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Tan0016465 (gene) of Snake gourd v1 genome

Gene IDTan0016465
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG11:8632012..8632443
RNA-Seq ExpressionTan0016465
SyntenyTan0016465
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011656615.1 uncharacterized protein LOC105435757 [Cucumis sativus]5.8e-6889.51Show/hide
Query:  MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQQAA
        MARQLQ++H SQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQR     VN TEPENGNDEMFFSREQQA+
Subjt:  MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQQAA

Query:  VWQKNILMGGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK
        +W KNILMGGKCQLPDFSGVILYDPNGN VTPAK+P PLLTWK
Subjt:  VWQKNILMGGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK

XP_022959632.1 uncharacterized protein LOC111460648 [Cucurbita moschata]6.8e-6990.28Show/hide
Query:  MARQLQ-MMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQQA
        MARQLQ MMH SQ TAQVGMAG SLLLCAFALFMCASHARKWR RWNACLDYGYEFEDPVIELNQEATVVTTQRVN CVVNA EPENGNDEMFFSREQ+A
Subjt:  MARQLQ-MMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQQA

Query:  AVWQKNILMGGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK
        AVW+KNILMGGKCQLPDFSGVILYD NGNVVTPA++  PLLTWK
Subjt:  AVWQKNILMGGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK

XP_022990795.1 uncharacterized protein LOC111487577 [Cucurbita maxima]2.3e-6990.28Show/hide
Query:  MARQLQ-MMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQQA
        MARQLQ MMH SQ TAQVGMAG SLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVN CVVNATEPEN NDEMFFSREQ+A
Subjt:  MARQLQ-MMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQQA

Query:  AVWQKNILMGGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK
         VW+KNILMGGKCQLPDFSGVILYD NGNVVTPA++ +PLLTWK
Subjt:  AVWQKNILMGGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK

XP_023512486.1 uncharacterized protein LOC111777221 [Cucurbita pepo subsp. pepo]3.6e-7091.67Show/hide
Query:  MARQLQ-MMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQQA
        MARQLQ MMH SQ TAQVGMAG SLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVN CVVNATEPENGNDEMFFSREQ+A
Subjt:  MARQLQ-MMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQQA

Query:  AVWQKNILMGGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK
        AVW+KNILMGGKCQLPDFSGVILYD NGNVVTPA++  PLLTWK
Subjt:  AVWQKNILMGGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK

XP_038886392.1 uncharacterized protein LOC120076591 [Benincasa hispida]2.0e-7394.41Show/hide
Query:  MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQQAA
        MARQLQMMHPSQ TAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATV+TTQRVNACVVNATE EN NDEMFFSREQQAA
Subjt:  MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQQAA

Query:  VWQKNILMGGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK
        +WQKNILMGGKCQLPDFSGVILYDPNGN VTPAK+P PLLTWK
Subjt:  VWQKNILMGGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK

TrEMBL top hitse value%identityAlignment
A0A0A0K8P1 Uncharacterized protein2.8e-6889.51Show/hide
Query:  MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQQAA
        MARQLQ++H SQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQR     VN TEPENGNDEMFFSREQQA+
Subjt:  MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQQAA

Query:  VWQKNILMGGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK
        +W KNILMGGKCQLPDFSGVILYDPNGN VTPAK+P PLLTWK
Subjt:  VWQKNILMGGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK

A0A5A7SQ79 Putative Nucleolar protein 162.6e-6687.41Show/hide
Query:  MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQQAA
        MARQLQ++H SQGT QVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTT +     VNATEPEN N+EMFFSREQQA+
Subjt:  MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQQAA

Query:  VWQKNILMGGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK
        +W KNILMGGKCQLPDFSGVILYDPNGNVVTPAK+P PLLTWK
Subjt:  VWQKNILMGGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK

A0A6J1C1Z5 uncharacterized protein LOC1110066839.0e-6787.41Show/hide
Query:  MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQQAA
        MARQLQ++HP QGTAQ+GMAGVSLL CAFALFMCASHARKWRRRWNACLDYG+EFEDPVIELNQEATVVTT R      NATE ENGNDEMFFSREQQAA
Subjt:  MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQQAA

Query:  VWQKNILMGGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK
        VWQKNILMGGKCQLPDFSGVILYD +GN VTPAK+PYPLLTWK
Subjt:  VWQKNILMGGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK

A0A6J1H530 uncharacterized protein LOC1114606483.3e-6990.28Show/hide
Query:  MARQLQ-MMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQQA
        MARQLQ MMH SQ TAQVGMAG SLLLCAFALFMCASHARKWR RWNACLDYGYEFEDPVIELNQEATVVTTQRVN CVVNA EPENGNDEMFFSREQ+A
Subjt:  MARQLQ-MMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQQA

Query:  AVWQKNILMGGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK
        AVW+KNILMGGKCQLPDFSGVILYD NGNVVTPA++  PLLTWK
Subjt:  AVWQKNILMGGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK

A0A6J1JR28 uncharacterized protein LOC1114875771.1e-6990.28Show/hide
Query:  MARQLQ-MMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQQA
        MARQLQ MMH SQ TAQVGMAG SLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVN CVVNATEPEN NDEMFFSREQ+A
Subjt:  MARQLQ-MMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQQA

Query:  AVWQKNILMGGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK
         VW+KNILMGGKCQLPDFSGVILYD NGNVVTPA++ +PLLTWK
Subjt:  AVWQKNILMGGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49000.1 unknown protein3.2e-0846.3Show/hide
Query:  ENGNDEMFFSREQQAAVWQKNILMGGKCQLPDFSGVILYDPNGNVV--TPAKSP
        +N  +E   + E++  +WQ+ ILMGGKC+  DFSGVI YD NG ++   P +SP
Subjt:  ENGNDEMFFSREQQAAVWQKNILMGGKCQLPDFSGVILYDPNGNVV--TPAKSP

AT1G71740.1 unknown protein4.6e-2343.7Show/hide
Query:  PSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQ-QAAVWQKNILM
        P   T  + +  + L   +  L   ASH+++  RRW AC  YG    +PVI L  + T++                NG+  M  S +Q +  +WQKNILM
Subjt:  PSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQ-QAAVWQKNILM

Query:  GGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK
        GGKCQLPDFSGVILYD +G VV PAK+  PLLTWK
Subjt:  GGKCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK

AT3G14760.1 unknown protein3.3e-0567.86Show/hide
Query:  VWQKNILMGGKCQLPDFSGVILYDPNGN
        VWQ+ ILMG KC+LP FSG+ILYD  G+
Subjt:  VWQKNILMGGKCQLPDFSGVILYDPNGN

AT3G18560.1 unknown protein1.8e-0651.16Show/hide
Query:  EQQAAVWQKNILMGGKCQLPDFSGVILYDPNGNVV--TPAKSP
        E++  VWQ+ ILMGGKC+  D+SGVI YD +G+ +   P +SP
Subjt:  EQQAAVWQKNILMGGKCQLPDFSGVILYDPNGNVV--TPAKSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGGCAACTGCAAATGATGCATCCTTCACAAGGCACAGCTCAGGTTGGCATGGCTGGTGTAAGCCTTCTCTTGTGTGCTTTTGCATTGTTCATGTGTGCTTCCCA
TGCTCGGAAATGGCGTCGTCGTTGGAATGCTTGCTTGGATTATGGCTACGAGTTTGAGGACCCTGTAATAGAGCTGAACCAAGAAGCAACGGTTGTGACTACGCAACGAG
TGAACGCCTGCGTTGTGAATGCCACTGAGCCGGAGAATGGCAACGATGAGATGTTCTTCAGCAGAGAGCAACAAGCTGCTGTATGGCAGAAGAACATACTCATGGGTGGG
AAGTGCCAGCTACCGGACTTCTCGGGCGTCATACTATACGACCCTAATGGAAATGTTGTAACCCCTGCAAAATCTCCGTACCCTCTACTCACCTGGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGGCAACTGCAAATGATGCATCCTTCACAAGGCACAGCTCAGGTTGGCATGGCTGGTGTAAGCCTTCTCTTGTGTGCTTTTGCATTGTTCATGTGTGCTTCCCA
TGCTCGGAAATGGCGTCGTCGTTGGAATGCTTGCTTGGATTATGGCTACGAGTTTGAGGACCCTGTAATAGAGCTGAACCAAGAAGCAACGGTTGTGACTACGCAACGAG
TGAACGCCTGCGTTGTGAATGCCACTGAGCCGGAGAATGGCAACGATGAGATGTTCTTCAGCAGAGAGCAACAAGCTGCTGTATGGCAGAAGAACATACTCATGGGTGGG
AAGTGCCAGCTACCGGACTTCTCGGGCGTCATACTATACGACCCTAATGGAAATGTTGTAACCCCTGCAAAATCTCCGTACCCTCTACTCACCTGGAAGTGA
Protein sequenceShow/hide protein sequence
MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNATEPENGNDEMFFSREQQAAVWQKNILMGG
KCQLPDFSGVILYDPNGNVVTPAKSPYPLLTWK