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Tan0016470 (gene) of Snake gourd v1 genome

Gene IDTan0016470
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 10
Genome locationLG09:43388388..43388603
RNA-Seq ExpressionTan0016470
SyntenyTan0016470
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637268.1 hypothetical protein CSA_017684 [Cucumis sativus]9.7e-0853.73Show/hide
Query:  WLICLVLISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCRG
        WLIC+V ISMLV  QEV A   +LK  + C+ P+PPPSCS    +       N Y RGCSAI+RCRG
Subjt:  WLICLVLISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCRG

KAG7020863.1 hypothetical protein SDJN02_17551, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-0952.11Show/hide
Query:  ICLVLISMLVTGQEVAADR------TYLKLVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCRGG
        ICL LI+ML+T Q+V  ++       YLK ++C+ PNPP  CSL   +G   V AN Y RGCSAI+RCRGG
Subjt:  ICLVLISMLVTGQEVAADR------TYLKLVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCRGG

XP_022947821.1 protein RALF-like 10 [Cucurbita moschata]1.4e-1160.29Show/hide
Query:  WLICLVLISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCRGG
        WLICLVLI MLV  Q+VA++  +LK  D C QPNPPP CS+ N      V AN Y RGCS I RCRGG
Subjt:  WLICLVLISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCRGG

XP_023533089.1 protein RALF-like 10 [Cucurbita pepo subsp. pepo]5.5e-1160.29Show/hide
Query:  WLICLVLISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCRGG
        WLIC+VLISMLV  QEVA++  +LK  D C QPNPP  CS+ N      V AN Y RGCS I RCRGG
Subjt:  WLICLVLISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCRGG

XP_038877580.1 protein RALF-like 11 [Benincasa hispida]5.9e-1363.24Show/hide
Query:  WLICLVLISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCRGG
        WLIC+V ISMLV G  VAA++ YL+ +D CNQPNPPP+CS    E    V AN Y RGCSAI+RCRGG
Subjt:  WLICLVLISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCRGG

TrEMBL top hitse value%identityAlignment
A0A0A0LI94 Uncharacterized protein2.4e-1263.24Show/hide
Query:  WLICLVLISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCRGG
        WLICL LI MLV GQEVAA+  +LK +D CNQP+PPP+C  PN +      AN Y R CSAINRCRGG
Subjt:  WLICLVLISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCRGG

A0A0A0M0X3 Uncharacterized protein4.7e-0853.73Show/hide
Query:  WLICLVLISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCRG
        WLIC+V ISMLV  QEV A   +LK  + C+ P+PPPSCS    +       N Y RGCSAI+RCRG
Subjt:  WLICLVLISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCRG

A0A1S4DY33 protein RALF-like 301.8e-0754.41Show/hide
Query:  WLICLVLISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCRGG
        WLIC  L+SMLV G EVAA   +LK +D C QP+PP SC   +    +P+   AY RGCS I RCRGG
Subjt:  WLICLVLISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCRGG

A0A6J1G7J2 protein RALF-like 107.0e-1260.29Show/hide
Query:  WLICLVLISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCRGG
        WLICLVLI MLV  Q+VA++  +LK  D C QPNPPP CS+ N      V AN Y RGCS I RCRGG
Subjt:  WLICLVLISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCRGG

B2Y4P6 Putative rapid alkalinization factor (RALF) family protein2.0e-0645.59Show/hide
Query:  WLICLVLISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR
        W+ICL++IS  VT + V + R Y++   +  C  PNPPP C  P  E   P   N Y+RGCS I+RCR
Subjt:  WLICLVLISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR

SwissProt top hitse value%identityAlignment
F4ISE1 Protein RALF-like 121.1e-0641.18Show/hide
Query:  WLICLVLISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR
        W+I L++I  +V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  WLICLVLISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR

F4ISE2 Protein RALF-like 131.0e-0742.65Show/hide
Query:  WLICLVLISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR
        W+ICL++I   V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  WLICLVLISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR

O64466 Protein RALF-like 112.0e-0844.12Show/hide
Query:  WLICLVLISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR
        WLICL++I   V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  WLICLVLISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR

O65919 Protein RALF-like 103.2e-0641.67Show/hide
Query:  MKQLWLICLVLISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR
        MK L +ICL++I   V    V + R +L    +  C  PNPPP C  P  +   P  AN Y RGCS I RC+
Subjt:  MKQLWLICLVLISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR

Q9LSG0 Protein RALF-like 252.2e-0746.48Show/hide
Query:  MKQLWLICLVLISMLVTGQEVAAD--RTYLKLVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR
        MK   +I LV+ S+L+ G+  A D  R YL L  C +PN PP C     +  TPV  N Y+RGC+ INRCR
Subjt:  MKQLWLICLVLISMLVTGQEVAAD--RTYLKLVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR

Arabidopsis top hitse value%identityAlignment
AT2G19020.1 ralf-like 102.3e-0741.67Show/hide
Query:  MKQLWLICLVLISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR
        MK L +ICL++I   V    V + R +L    +  C  PNPPP C  P  +   P  AN Y RGCS I RC+
Subjt:  MKQLWLICLVLISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR

AT2G19030.1 ralf-like 111.4e-0944.12Show/hide
Query:  WLICLVLISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR
        WLICL++I   V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  WLICLVLISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR

AT2G19040.1 RALF-like 127.9e-0841.18Show/hide
Query:  WLICLVLISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR
        W+I L++I  +V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  WLICLVLISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR

AT2G19045.1 RALF-like 137.2e-0942.65Show/hide
Query:  WLICLVLISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR
        W+ICL++I   V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  WLICLVLISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR

AT3G25165.1 ralf-like 251.6e-0846.48Show/hide
Query:  MKQLWLICLVLISMLVTGQEVAAD--RTYLKLVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR
        MK   +I LV+ S+L+ G+  A D  R YL L  C +PN PP C     +  TPV  N Y+RGC+ INRCR
Subjt:  MKQLWLICLVLISMLVTGQEVAAD--RTYLKLVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAATTATGGCTCATATGTTTAGTTCTTATTAGCATGTTGGTGACAGGACAAGAGGTAGCAGCGGATAGAACTTATCTTAAACTAGTGGACTGCAACCAACCAAA
CCCACCACCAAGTTGTTCTTTACCGAATGGAGAAGGTTCTACACCTGTTTCTGCTAATGCCTATACTCGAGGTTGCTCTGCCATCAATCGTTGTCGTGGAGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAATTATGGCTCATATGTTTAGTTCTTATTAGCATGTTGGTGACAGGACAAGAGGTAGCAGCGGATAGAACTTATCTTAAACTAGTGGACTGCAACCAACCAAA
CCCACCACCAAGTTGTTCTTTACCGAATGGAGAAGGTTCTACACCTGTTTCTGCTAATGCCTATACTCGAGGTTGCTCTGCCATCAATCGTTGTCGTGGAGGGTGA
Protein sequenceShow/hide protein sequence
MKQLWLICLVLISMLVTGQEVAADRTYLKLVDCNQPNPPPSCSLPNGEGSTPVSANAYTRGCSAINRCRGG