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Tan0016473 (gene) of Snake gourd v1 genome

Gene IDTan0016473
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCalcium-binding EF hand family protein
Genome locationLG09:35688545..35688955
RNA-Seq ExpressionTan0016473
SyntenyTan0016473
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ95513.1 calcium-binding EF hand family protein [Cucumis melo var. makuwa]1.6e-5183.59Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRSQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALANG
        MSVAFLNDTTVTNFINDTKIFDDCVKESFK+LD D DGFLN NELR GF SQPLE ELMDPV+DL EVVCHKF+VEK+GGIDE EFKSV+ DILLA+A G
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRSQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALANG

Query:  IGNLPVQVALQQDSLLMKAVEHEKAKEE
        IGN P+QVALQQDS LMKAVE EKAKE+
Subjt:  IGNLPVQVALQQDSLLMKAVEHEKAKEE

XP_004142569.1 uncharacterized protein LOC101222885 [Cucumis sativus]5.9e-5485.94Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRSQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALANG
        MSVAFLNDTTVTNFINDTKIFDDCVKESFK+LD D DGFLN NELRVGFRS PLEFELMDPV+DLSEVVCHKF VEK+GGIDE+EFKSVI DILLA+A G
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRSQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALANG

Query:  IGNLPVQVALQQDSLLMKAVEHEKAKEE
        IGN P+QVALQQDS LMKAVE EKA+E+
Subjt:  IGNLPVQVALQQDSLLMKAVEHEKAKEE

XP_008462771.1 PREDICTED: uncharacterized protein LOC103501058 [Cucumis melo]3.2e-5285.16Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRSQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALANG
        MSVAFLNDTTVTNFINDTKIFDDCVKESFK+LD D DGFLN NELR GF SQPLE ELMDPV+DL EVVCHKF+VEK+GGIDEKEFKSVI DILLA+A G
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRSQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALANG

Query:  IGNLPVQVALQQDSLLMKAVEHEKAKEE
        IGN P+QVALQQDS LMKAVE EKAKE+
Subjt:  IGNLPVQVALQQDSLLMKAVEHEKAKEE

XP_022158640.1 uncharacterized protein LOC111025096 [Momordica charantia]7.2e-4474.22Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRSQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALANG
        MSVAFLNDTTV +FINDTKIFD+CVKESF++LD+DKDG LNANEL  GFRS        DPV+DLS+ VC KF+VEK+GGI+E EFKSV+ +ILLA+A G
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRSQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALANG

Query:  IGNLPVQVALQQDSLLMKAVEHEKAKEE
        IGNLP+QVALQQD LLMKAVEHE+AKEE
Subjt:  IGNLPVQVALQQDSLLMKAVEHEKAKEE

XP_034925333.1 uncharacterized protein LOC118056988 [Populus alba]9.2e-2347.62Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGF---RSQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLAL
        MS+A +N+TTVT F+ D K F++CVKE F+ LD+D DG L+ +ELR GF    S   E    + ++ L + +  +F  ++NG ID +EFK +I +++ A+
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGF---RSQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLAL

Query:  ANGIGNLPVQVALQQDSLLMKAVEHE
          G+GN PV VAL+ DSLLMKAVEHE
Subjt:  ANGIGNLPVQVALQQDSLLMKAVEHE

TrEMBL top hitse value%identityAlignment
A0A0A0LYD8 Uncharacterized protein2.9e-5485.94Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRSQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALANG
        MSVAFLNDTTVTNFINDTKIFDDCVKESFK+LD D DGFLN NELRVGFRS PLEFELMDPV+DLSEVVCHKF VEK+GGIDE+EFKSVI DILLA+A G
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRSQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALANG

Query:  IGNLPVQVALQQDSLLMKAVEHEKAKEE
        IGN P+QVALQQDS LMKAVE EKA+E+
Subjt:  IGNLPVQVALQQDSLLMKAVEHEKAKEE

A0A1S3CI80 uncharacterized protein LOC1035010581.6e-5285.16Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRSQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALANG
        MSVAFLNDTTVTNFINDTKIFDDCVKESFK+LD D DGFLN NELR GF SQPLE ELMDPV+DL EVVCHKF+VEK+GGIDEKEFKSVI DILLA+A G
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRSQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALANG

Query:  IGNLPVQVALQQDSLLMKAVEHEKAKEE
        IGN P+QVALQQDS LMKAVE EKAKE+
Subjt:  IGNLPVQVALQQDSLLMKAVEHEKAKEE

A0A5A7VAA7 Calcium-binding EF hand family protein1.6e-5285.16Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRSQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALANG
        MSVAFLNDTTVTNFINDTKIFDDCVKESFK+LD D DGFLN NELR GF SQPLE ELMDPV+DL EVVCHKF+VEK+GGIDEKEFKSVI DILLA+A G
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRSQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALANG

Query:  IGNLPVQVALQQDSLLMKAVEHEKAKEE
        IGN P+QVALQQDS LMKAVE EKAKE+
Subjt:  IGNLPVQVALQQDSLLMKAVEHEKAKEE

A0A5D3B8A7 Calcium-binding EF hand family protein7.8e-5283.59Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRSQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALANG
        MSVAFLNDTTVTNFINDTKIFDDCVKESFK+LD D DGFLN NELR GF SQPLE ELMDPV+DL EVVCHKF+VEK+GGIDE EFKSV+ DILLA+A G
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRSQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALANG

Query:  IGNLPVQVALQQDSLLMKAVEHEKAKEE
        IGN P+QVALQQDS LMKAVE EKAKE+
Subjt:  IGNLPVQVALQQDSLLMKAVEHEKAKEE

A0A6J1DWE2 uncharacterized protein LOC1110250963.5e-4474.22Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRSQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALANG
        MSVAFLNDTTV +FINDTKIFD+CVKESF++LD+DKDG LNANEL  GFRS        DPV+DLS+ VC KF+VEK+GGI+E EFKSV+ +ILLA+A G
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRSQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALANG

Query:  IGNLPVQVALQQDSLLMKAVEHEKAKEE
        IGNLP+QVALQQD LLMKAVEHE+AKEE
Subjt:  IGNLPVQVALQQDSLLMKAVEHEKAKEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein5.4e-1334.71Show/hide
Query:  LNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRS-QPLEFELM--DPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALANGIG
        +   T+  F++DTK F+    + F+ LD+DK+G L+ +ELR G  +   +E E+   D  +++   +  +F  +    +  K F+ +I +IL A+A GIG
Subjt:  LNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRS-QPLEFELM--DPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALANGIG

Query:  NLPVQVALQQDSLLMKAVEHE
        N PV + +  D L+MKAV HE
Subjt:  NLPVQVALQQDSLLMKAVEHE

AT2G44310.1 Calcium-binding EF-hand family protein3.4e-1533.33Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRSQPL-----EFELMDPVEDLSEV---VCHKFHVEKNGGIDEKEFKSVILD
        M V  ++ +TV +F++D + F   V E F  LD++KDG L+ +ELR  F S  L       +++ P ++L+ +   +  KF  +++G +D +EF+S +  
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRSQPL-----EFELMDPVEDLSEV---VCHKFHVEKNGGIDEKEFKSVILD

Query:  ILLALANGIGNLPVQVAL--QQDSLLMKAVEHEKAKEE
        I+LA+A+G+G+ P+ + L    D+ L KA + E +K E
Subjt:  ILLALANGIGNLPVQVAL--QQDSLLMKAVEHEKAKEE

AT4G38810.2 Calcium-binding EF-hand family protein4.9e-0629.82Show/hide
Query:  LNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFR------SQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALAN
        L+ + +   + + K+FD  V++ F++LD D+DG L+  EL+            P +    D     SEV+ ++F       + + EFK V+ DILL +A 
Subjt:  LNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFR------SQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALAN

Query:  GIGNLPVQVALQQD
        G+   P+ V L+ D
Subjt:  GIGNLPVQVALQQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTAGCTTTTCTCAATGACACAACAGTGACAAATTTCATCAATGACACAAAAATATTTGACGATTGCGTCAAGGAAAGTTTTAAGAGGCTCGACATGGACAAAGA
TGGCTTCCTCAACGCGAATGAACTTCGAGTGGGGTTTCGTAGTCAGCCATTAGAATTTGAATTAATGGATCCTGTTGAGGATCTCTCTGAGGTTGTTTGTCATAAGTTTC
ATGTGGAGAAAAATGGTGGCATTGATGAAAAAGAGTTCAAGTCTGTTATATTGGATATTCTACTTGCCTTGGCTAATGGGATCGGAAACTTGCCTGTCCAAGTTGCACTT
CAACAAGATAGCCTTCTCATGAAGGCTGTTGAACATGAAAAGGCGAAAGAAGAAATAACGGCCACAAATAGAACTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTAGCTTTTCTCAATGACACAACAGTGACAAATTTCATCAATGACACAAAAATATTTGACGATTGCGTCAAGGAAAGTTTTAAGAGGCTCGACATGGACAAAGA
TGGCTTCCTCAACGCGAATGAACTTCGAGTGGGGTTTCGTAGTCAGCCATTAGAATTTGAATTAATGGATCCTGTTGAGGATCTCTCTGAGGTTGTTTGTCATAAGTTTC
ATGTGGAGAAAAATGGTGGCATTGATGAAAAAGAGTTCAAGTCTGTTATATTGGATATTCTACTTGCCTTGGCTAATGGGATCGGAAACTTGCCTGTCCAAGTTGCACTT
CAACAAGATAGCCTTCTCATGAAGGCTGTTGAACATGAAAAGGCGAAAGAAGAAATAACGGCCACAAATAGAACTCCCTGA
Protein sequenceShow/hide protein sequence
MSVAFLNDTTVTNFINDTKIFDDCVKESFKRLDMDKDGFLNANELRVGFRSQPLEFELMDPVEDLSEVVCHKFHVEKNGGIDEKEFKSVILDILLALANGIGNLPVQVAL
QQDSLLMKAVEHEKAKEEITATNRTP