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Tan0016477 (gene) of Snake gourd v1 genome

Gene IDTan0016477
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUbiquitin-conjugating enzyme E2 34-like
Genome locationLG04:87743315..87744718
RNA-Seq ExpressionTan0016477
SyntenyTan0016477
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606678.1 hypothetical protein SDJN03_00020, partial [Cucurbita argyrosperma subsp. sororia]1.4e-6285.33Show/hide
Query:  MDDSCFDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEETERKWLEQEKKSKKSWKNTLFSWLKSDKKSKSLPKQDRNPQTSNKRRVHVSGPIYTGATTVD
        MDD CFDDFDPR NFSKFLEEAKHHAKEEDFKA  +EET RKWL Q KKSKKSWKNTLFSWL SDK SKSLPK +RN  TSNKRRVHVSGPIYTGATTVD
Subjt:  MDDSCFDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEETERKWLEQEKKSKKSWKNTLFSWLKSDKKSKSLPKQDRNPQTSNKRRVHVSGPIYTGATTVD

Query:  GRPRHRPMSEPIASLFNPSMRTEMEIPYMCLHQHTCSNTNHNYGPIYLVT
        GRPRHRP S PIASLFNPSMRTEMEIPYMCLHQ T    NH YGPIYLVT
Subjt:  GRPRHRPMSEPIASLFNPSMRTEMEIPYMCLHQHTCSNTNHNYGPIYLVT

XP_011651731.1 uncharacterized protein LOC101209455 [Cucumis sativus]1.1e-5977.02Show/hide
Query:  MKKSVSPDFEMDDSCFDDFDPRLNFSKFLEEAKHHAKEEDFKALK-EEETERKWLEQEKKSKKSWKNTLFSWLKSDKKSKSLPKQDRNPQTSNKRRVHVS
        MKKS+S D+EM++  FDDFD  LNFSKFLEEAKHHA ++ FKA   EEETERKWL QEKK+KKSWKNTLFSWLKSDKKSKSLPK ++NP T NKRRV+VS
Subjt:  MKKSVSPDFEMDDSCFDDFDPRLNFSKFLEEAKHHAKEEDFKALK-EEETERKWLEQEKKSKKSWKNTLFSWLKSDKKSKSLPKQDRNPQTSNKRRVHVS

Query:  GPIYTGATTVDGRPRHRPMSEPIASLFNPSMRTEMEIPYMCLHQHTCSNTNHNYGPIYLVT
        GPIY+ A T+DGRPR RPMS PIASLFNP+MRTE EIPYMCLHQ +  NTN NYGPIYLVT
Subjt:  GPIYTGATTVDGRPRHRPMSEPIASLFNPSMRTEMEIPYMCLHQHTCSNTNHNYGPIYLVT

XP_022152626.1 uncharacterized protein LOC111020302 [Momordica charantia]1.4e-5978.53Show/hide
Query:  MKKSVSPDFEMDDSCFDDFDPRLNFSKFLEEAKHHAKEEDFKALK--EEETERKWLEQEKKSKKSWKNTLFSWLKSDKKSKSLPKQDRN-PQTSNKRRVH
        M KSVSPD EMDD  FD+FDPRL+FSKFLEEAKHHA  +DFKA K  EEE  RKWL QEKKSKKSWK T+FSWLKSDKKSK LPK + N P TS+KR VH
Subjt:  MKKSVSPDFEMDDSCFDDFDPRLNFSKFLEEAKHHAKEEDFKALK--EEETERKWLEQEKKSKKSWKNTLFSWLKSDKKSKSLPKQDRN-PQTSNKRRVH

Query:  VSGPIYTGATTVDGRPRHRPMSEPIASLFNPSMRTEMEIPYMCLHQHTCSNTNHNYGPIYLVT
        VSGPIYTGA T DGRPR RP S PIASLFNPSMRTEMEIPYMCLHQ T  N++HNYGPIYLVT
Subjt:  VSGPIYTGATTVDGRPRHRPMSEPIASLFNPSMRTEMEIPYMCLHQHTCSNTNHNYGPIYLVT

XP_022949073.1 uncharacterized protein LOC111452535 [Cucurbita moschata]2.0e-6184.67Show/hide
Query:  MDDSCFDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEETERKWLEQEKKSKKSWKNTLFSWLKSDKKSKSLPKQDRNPQTSNKRRVHVSGPIYTGATTVD
        MDD CFDDFDPR NFSKFLEEAKHHAKEEDFKA  +EET RKWL Q KKSKKSWKNTLFSWL SDK SKSLPK +RN  TSNKRRVHVSG IYTGATTVD
Subjt:  MDDSCFDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEETERKWLEQEKKSKKSWKNTLFSWLKSDKKSKSLPKQDRNPQTSNKRRVHVSGPIYTGATTVD

Query:  GRPRHRPMSEPIASLFNPSMRTEMEIPYMCLHQHTCSNTNHNYGPIYLVT
        GRPRHRP S PIASLFNPSMRTEMEIPYMCLHQ T    NH YGPIYLVT
Subjt:  GRPRHRPMSEPIASLFNPSMRTEMEIPYMCLHQHTCSNTNHNYGPIYLVT

XP_022998123.1 uncharacterized protein LOC111492863 [Cucurbita maxima]1.7e-6082.67Show/hide
Query:  MDDSCFDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEETERKWLEQEKKSKKSWKNTLFSWLKSDKKSKSLPKQDRNPQTSNKRRVHVSGPIYTGATTVD
        MDD CFDDFDPR NFSKFLEEAKHHAKEEDFKA  +EET RKWL Q+KKSKKSWKNTLFSWL  DK SKS PK DR   TSNKR VHVSGPIYTGATT+D
Subjt:  MDDSCFDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEETERKWLEQEKKSKKSWKNTLFSWLKSDKKSKSLPKQDRNPQTSNKRRVHVSGPIYTGATTVD

Query:  GRPRHRPMSEPIASLFNPSMRTEMEIPYMCLHQHTCSNTNHNYGPIYLVT
        GRPRHRP S PIASLFNPSMRTEMEIPYMCLHQ T    NH YGPIYLVT
Subjt:  GRPRHRPMSEPIASLFNPSMRTEMEIPYMCLHQHTCSNTNHNYGPIYLVT

TrEMBL top hitse value%identityAlignment
A0A0A0LC20 Uncharacterized protein5.3e-6077.02Show/hide
Query:  MKKSVSPDFEMDDSCFDDFDPRLNFSKFLEEAKHHAKEEDFKALK-EEETERKWLEQEKKSKKSWKNTLFSWLKSDKKSKSLPKQDRNPQTSNKRRVHVS
        MKKS+S D+EM++  FDDFD  LNFSKFLEEAKHHA ++ FKA   EEETERKWL QEKK+KKSWKNTLFSWLKSDKKSKSLPK ++NP T NKRRV+VS
Subjt:  MKKSVSPDFEMDDSCFDDFDPRLNFSKFLEEAKHHAKEEDFKALK-EEETERKWLEQEKKSKKSWKNTLFSWLKSDKKSKSLPKQDRNPQTSNKRRVHVS

Query:  GPIYTGATTVDGRPRHRPMSEPIASLFNPSMRTEMEIPYMCLHQHTCSNTNHNYGPIYLVT
        GPIY+ A T+DGRPR RPMS PIASLFNP+MRTE EIPYMCLHQ +  NTN NYGPIYLVT
Subjt:  GPIYTGATTVDGRPRHRPMSEPIASLFNPSMRTEMEIPYMCLHQHTCSNTNHNYGPIYLVT

A0A5D3D6L0 Uncharacterized protein8.8e-5573.91Show/hide
Query:  MKKSVSPDFEMDDSCFDDFDPRLNFSKFLEEAKHHAKEEDFKALK-EEETERKWLEQEKKSKKSWKNTLFSWLKSDKKSKSLPKQDRNPQTSNKRRVHVS
        MKKS S D+EM+++ FDDFD  LNFS FLEEAKHHA  +  KA   EEET RK L QEKK+KKSWKNTLFSWLKSDKKSKSLPK ++NP T NKRRV+VS
Subjt:  MKKSVSPDFEMDDSCFDDFDPRLNFSKFLEEAKHHAKEEDFKALK-EEETERKWLEQEKKSKKSWKNTLFSWLKSDKKSKSLPKQDRNPQTSNKRRVHVS

Query:  GPIYTGATTVDGRPRHRPMSEPIASLFNPSMRTEMEIPYMCLHQHTCSNTNHNYGPIYLVT
        GP+Y+ ATT +GRPR RPMS PIASLFNPSMRTE EIPYMCL Q +  N+NHNYGPIYLVT
Subjt:  GPIYTGATTVDGRPRHRPMSEPIASLFNPSMRTEMEIPYMCLHQHTCSNTNHNYGPIYLVT

A0A6J1DIA9 uncharacterized protein LOC1110203027.0e-6078.53Show/hide
Query:  MKKSVSPDFEMDDSCFDDFDPRLNFSKFLEEAKHHAKEEDFKALK--EEETERKWLEQEKKSKKSWKNTLFSWLKSDKKSKSLPKQDRN-PQTSNKRRVH
        M KSVSPD EMDD  FD+FDPRL+FSKFLEEAKHHA  +DFKA K  EEE  RKWL QEKKSKKSWK T+FSWLKSDKKSK LPK + N P TS+KR VH
Subjt:  MKKSVSPDFEMDDSCFDDFDPRLNFSKFLEEAKHHAKEEDFKALK--EEETERKWLEQEKKSKKSWKNTLFSWLKSDKKSKSLPKQDRN-PQTSNKRRVH

Query:  VSGPIYTGATTVDGRPRHRPMSEPIASLFNPSMRTEMEIPYMCLHQHTCSNTNHNYGPIYLVT
        VSGPIYTGA T DGRPR RP S PIASLFNPSMRTEMEIPYMCLHQ T  N++HNYGPIYLVT
Subjt:  VSGPIYTGATTVDGRPRHRPMSEPIASLFNPSMRTEMEIPYMCLHQHTCSNTNHNYGPIYLVT

A0A6J1GB15 uncharacterized protein LOC1114525359.7e-6284.67Show/hide
Query:  MDDSCFDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEETERKWLEQEKKSKKSWKNTLFSWLKSDKKSKSLPKQDRNPQTSNKRRVHVSGPIYTGATTVD
        MDD CFDDFDPR NFSKFLEEAKHHAKEEDFKA  +EET RKWL Q KKSKKSWKNTLFSWL SDK SKSLPK +RN  TSNKRRVHVSG IYTGATTVD
Subjt:  MDDSCFDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEETERKWLEQEKKSKKSWKNTLFSWLKSDKKSKSLPKQDRNPQTSNKRRVHVSGPIYTGATTVD

Query:  GRPRHRPMSEPIASLFNPSMRTEMEIPYMCLHQHTCSNTNHNYGPIYLVT
        GRPRHRP S PIASLFNPSMRTEMEIPYMCLHQ T    NH YGPIYLVT
Subjt:  GRPRHRPMSEPIASLFNPSMRTEMEIPYMCLHQHTCSNTNHNYGPIYLVT

A0A6J1KFX5 uncharacterized protein LOC1114928638.2e-6182.67Show/hide
Query:  MDDSCFDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEETERKWLEQEKKSKKSWKNTLFSWLKSDKKSKSLPKQDRNPQTSNKRRVHVSGPIYTGATTVD
        MDD CFDDFDPR NFSKFLEEAKHHAKEEDFKA  +EET RKWL Q+KKSKKSWKNTLFSWL  DK SKS PK DR   TSNKR VHVSGPIYTGATT+D
Subjt:  MDDSCFDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEETERKWLEQEKKSKKSWKNTLFSWLKSDKKSKSLPKQDRNPQTSNKRRVHVSGPIYTGATTVD

Query:  GRPRHRPMSEPIASLFNPSMRTEMEIPYMCLHQHTCSNTNHNYGPIYLVT
        GRPRHRP S PIASLFNPSMRTEMEIPYMCLHQ T    NH YGPIYLVT
Subjt:  GRPRHRPMSEPIASLFNPSMRTEMEIPYMCLHQHTCSNTNHNYGPIYLVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAATCTGTTTCTCCTGATTTTGAGATGGATGATTCTTGCTTTGATGATTTTGATCCTCGCCTCAACTTTTCCAAGTTCTTGGAAGAAGCAAAACATCATGCCAA
AGAAGAAGATTTCAAGGCCTTGAAAGAAGAAGAAACAGAAAGGAAATGGTTGGAACAAGAGAAAAAAAGCAAGAAATCATGGAAGAACACACTCTTTTCCTGGTTGAAAA
GTGATAAAAAGAGCAAATCTCTTCCTAAACAAGACAGAAATCCTCAAACATCCAATAAAAGGCGTGTTCATGTTTCGGGTCCGATTTACACCGGAGCTACGACCGTCGAT
GGAAGACCCCGACACCGTCCAATGTCTGAACCGATCGCGAGTCTCTTCAATCCGAGTATGCGAACTGAGATGGAGATTCCTTATATGTGTCTGCACCAGCATACTTGCAG
TAATACCAATCACAATTATGGCCCAATTTATCTTGTTACATAG
mRNA sequenceShow/hide mRNA sequence
CCACCTCTCAATTGTAATGGTATATTGTACCGAAAAAAAAATAAAGGAAAAACAGAGACTTCGTGTCAAATCATTTAAAGAGTGGATATAGCTTTAATATAGTAAGTAAT
TAATTGGGAATTTAAAATATATGCCATTAACGAAATTTCCATAATTAAGAGCGTAATATAAAAAGAGTCACCCATGTATATTTGAATTAAATATGTAGACAGGTTTAAAA
ATTTGTGTTTTAATGCTCGGCCATAATCTTAATCATATTGCAAGGCGATCAAATATTTTTTACTTTTTGCTTTGATGATTATGTTTGGTAGAATTGGTTGCTAACAAATT
TATTTCTTTTCCATTTCCATCAACTTTATTCCTTGATTTCTTTGTAGCTGTCTACTGTCTGCCACTTTTAGAAAGATAACAATGGCTAATTGAAAATCCCAAATGAAAGT
GTTCTTCAATGGCGGTTGTTCAACTTTGCCTCTTTTGATTTAGTTGCAGAAATCCTTCATGTTCTTCAATTTTTTATGCCATTTCTTCTGAACCAAGCTTCCTTATTTCT
CTTTTCTTTTTTGTACTTGATGAATTAGCAGAAAAACATGAACCACAAGCAACACAAAAACATTCTGAAACCAGACAAAAGTTGATCCGTAAATTTCTTGTCTGAATCCT
CTGTTGTTTCTTGTCTTCTACCTTGATATTGTTTTTGGACTCTTTTAGTTGTTTGGTTGGCTGTATTTTGTTCTATGAAGAAATCTGTTTCTCCTGATTTTGAGATGGAT
GATTCTTGCTTTGATGATTTTGATCCTCGCCTCAACTTTTCCAAGTTCTTGGAAGAAGCAAAACATCATGCCAAAGAAGAAGATTTCAAGGCCTTGAAAGAAGAAGAAAC
AGAAAGGAAATGGTTGGAACAAGAGAAAAAAAGCAAGAAATCATGGAAGAACACACTCTTTTCCTGGTTGAAAAGTGATAAAAAGAGCAAATCTCTTCCTAAACAAGACA
GAAATCCTCAAACATCCAATAAAAGGCGTGTTCATGTTTCGGGTCCGATTTACACCGGAGCTACGACCGTCGATGGAAGACCCCGACACCGTCCAATGTCTGAACCGATC
GCGAGTCTCTTCAATCCGAGTATGCGAACTGAGATGGAGATTCCTTATATGTGTCTGCACCAGCATACTTGCAGTAATACCAATCACAATTATGGCCCAATTTATCTTGT
TACATAGGCCTACATTGTCTCAAATTCATCTTGGATCCAGTGTTGCTCATCTTTGAAATCCTCTGTCTTGTTTTGTTTTGAATGTGTGATGATTCTGAAAG
Protein sequenceShow/hide protein sequence
MKKSVSPDFEMDDSCFDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEETERKWLEQEKKSKKSWKNTLFSWLKSDKKSKSLPKQDRNPQTSNKRRVHVSGPIYTGATTVD
GRPRHRPMSEPIASLFNPSMRTEMEIPYMCLHQHTCSNTNHNYGPIYLVT