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Tan0016526 (gene) of Snake gourd v1 genome

Gene IDTan0016526
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionConserved peptide upstream open reading frame 19
Genome locationLG02:92266919..92267152
RNA-Seq ExpressionTan0016526
SyntenyTan0016526
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0000166 - nucleotide binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB60481.1 hypothetical protein L484_014936 [Morus notabilis]6.0e-1167.21Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKK-YSCAETIGCMHLELLGGHRKARELGFQFMRPFPAA
        MSER + FLSSIGLLGEYCPTSRKK  S A+ +GCMHL L+ G  K   LG+ FMRPFP A
Subjt:  MSERASLFLSSIGLLGEYCPTSRKK-YSCAETIGCMHLELLGGHRKARELGFQFMRPFPAA

KAA0064818.1 ATP synthase subunit alpha [Cucumis melo var. makuwa]2.0e-2783.12Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKKYSCAETIGCMHLELLGGHRKARELGFQFMRPFPAAQKKIGPLEDTAADIYLF
        MSERASLFLSSIGLLGEYCPTSRKK SCAETIGCMHLELLG HRKAR LGF FMR FPAAQ+  G  EDTA   YLF
Subjt:  MSERASLFLSSIGLLGEYCPTSRKKYSCAETIGCMHLELLGGHRKARELGFQFMRPFPAAQKKIGPLEDTAADIYLF

KAG6585281.1 Eukaryotic translation initiation factor 5, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1495.35Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKKYSCAETIGCMHLELLGGH
        MSERA+LFLSSIGLLGEYCPTSRKKYSCAETIGCMHLEL GGH
Subjt:  MSERASLFLSSIGLLGEYCPTSRKKYSCAETIGCMHLELLGGH

KAG7020201.1 Eukaryotic translation initiation factor 5, partial [Cucurbita argyrosperma subsp. argyrosperma]8.9e-1584.31Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKKYSCAETIGCMHLELLGGHRKA-RELG
        MSERA+LFLSSIGLLGEYCPTSRKKYSCAETIGCMHLEL GGH  + R +G
Subjt:  MSERASLFLSSIGLLGEYCPTSRKKYSCAETIGCMHLELLGGHRKA-RELG

TYH72424.1 hypothetical protein ES332_D05G254800v1 [Gossypium tomentosum]6.6e-1060.61Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKK-YSCAETIGCMHLELLGGHRKARELGFQFMRPFPAAQKKIG
        MSERASLFLSSIGLLGEYCPTSRKK  S    I CMH+E    H     LGF+FM+  P+A+++ G
Subjt:  MSERASLFLSSIGLLGEYCPTSRKK-YSCAETIGCMHLELLGGHRKARELGFQFMRPFPAAQKKIG

TrEMBL top hitse value%identityAlignment
A0A5A7VB37 ATP synthase subunit alpha9.9e-2883.12Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKKYSCAETIGCMHLELLGGHRKARELGFQFMRPFPAAQKKIGPLEDTAADIYLF
        MSERASLFLSSIGLLGEYCPTSRKK SCAETIGCMHLELLG HRKAR LGF FMR FPAAQ+  G  EDTA   YLF
Subjt:  MSERASLFLSSIGLLGEYCPTSRKKYSCAETIGCMHLELLGGHRKARELGFQFMRPFPAAQKKIGPLEDTAADIYLF

A0A5D2L037 Uncharacterized protein3.2e-1060.61Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKK-YSCAETIGCMHLELLGGHRKARELGFQFMRPFPAAQKKIG
        MSERASLFLSSIGLLGEYCPTSRKK  S    I CMH+E    H     LGF+FM+  P+A+++ G
Subjt:  MSERASLFLSSIGLLGEYCPTSRKK-YSCAETIGCMHLELLGGHRKARELGFQFMRPFPAAQKKIG

A0A5D2QK17 Uncharacterized protein9.3e-1057.58Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKK-YSCAETIGCMHLELLGGHRKARELGFQFMRPFPAAQKKIG
        MSERAS FLSSIGLLGEYCPT RKK  S    I CMH+E    H     LGF+FM+  P+A++++G
Subjt:  MSERASLFLSSIGLLGEYCPTSRKK-YSCAETIGCMHLELLGGHRKARELGFQFMRPFPAAQKKIG

A0A7J8XXW1 W2 domain-containing protein9.3e-1060.94Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKK-YSCAETIGCMHLELLGGHRKARELGFQFMRPFPAAQKK
        MSERASLFLSSIGLLGEYCPTSRKK  S    I CMH+E    H     LGF+FM+  P+A+++
Subjt:  MSERASLFLSSIGLLGEYCPTSRKK-YSCAETIGCMHLELLGGHRKARELGFQFMRPFPAAQKK

W9QZ52 Uncharacterized protein2.9e-1167.21Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKK-YSCAETIGCMHLELLGGHRKARELGFQFMRPFPAA
        MSER + FLSSIGLLGEYCPTSRKK  S A+ +GCMHL L+ G  K   LG+ FMRPFP A
Subjt:  MSERASLFLSSIGLLGEYCPTSRKK-YSCAETIGCMHLELLGGHRKARELGFQFMRPFPAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G36732.1 conserved peptide upstream open reading frame 191.0e-0549.15Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKKYSCAETIGCMHLELLGGHRKARE----LGFQFMR
        MSE+ASLF SSI LLGEYCP SRKK +            +GG R   +    +GFQFM+
Subjt:  MSERASLFLSSIGLLGEYCPTSRKKYSCAETIGCMHLELLGGHRKARE----LGFQFMR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAACGGGCCTCTCTCTTTTTGTCATCGATTGGATTGCTTGGAGAGTATTGTCCTACGTCTAGGAAAAAGTACAGTTGCGCTGAGACTATTGGCTGCATGCATCT
TGAGTTGCTTGGGGGTCATAGAAAAGCACGCGAGCTTGGTTTCCAATTTATGCGGCCTTTTCCAGCTGCTCAAAAAAAGATAGGACCTCTGGAAGATACTGCTGCTGATA
TTTATCTTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGAACGGGCCTCTCTCTTTTTGTCATCGATTGGATTGCTTGGAGAGTATTGTCCTACGTCTAGGAAAAAGTACAGTTGCGCTGAGACTATTGGCTGCATGCATCT
TGAGTTGCTTGGGGGTCATAGAAAAGCACGCGAGCTTGGTTTCCAATTTATGCGGCCTTTTCCAGCTGCTCAAAAAAAGATAGGACCTCTGGAAGATACTGCTGCTGATA
TTTATCTTTTCTAA
Protein sequenceShow/hide protein sequence
MSERASLFLSSIGLLGEYCPTSRKKYSCAETIGCMHLELLGGHRKARELGFQFMRPFPAAQKKIGPLEDTAADIYLF