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Tan0016549 (gene) of Snake gourd v1 genome

Gene IDTan0016549
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG11:13262270..13265121
RNA-Seq ExpressionTan0016549
SyntenyTan0016549
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602002.1 hypothetical protein SDJN03_07235, partial [Cucurbita argyrosperma subsp. sororia]8.8e-1561.84Show/hide
Query:  MASLKFSLALKLLFFAVLFIASTASATENTPSFHNPHIRKLGMEYRTIDQKAALGAKPAVYDFPWKGGYDPPINNR
        M S K S+AL   F A+L +A T SA + + SF  PHIRKL MEY T+ +KAAL AKPAVYDFPWKGGY PP N+R
Subjt:  MASLKFSLALKLLFFAVLFIASTASATENTPSFHNPHIRKLGMEYRTIDQKAALGAKPAVYDFPWKGGYDPPINNR

KAG7014832.1 hypothetical protein SDJN02_22461 [Cucurbita argyrosperma subsp. argyrosperma]2.3e-0747.14Show/hide
Query:  LKFSLALKLLFFAVLFIASTASATENTPSFHNPHIRKLGMEYRTIDQKAALGAKPAVYDFPWKGGYDPPI
        ++ SL L+LLFFA+L +ASTASA  +    HNP   K+ MEY  + +      KP   D PW GGY PPI
Subjt:  LKFSLALKLLFFAVLFIASTASATENTPSFHNPHIRKLGMEYRTIDQKAALGAKPAVYDFPWKGGYDPPI

KGN53822.1 hypothetical protein Csa_015192 [Cucumis sativus]3.1e-1261.43Show/hide
Query:  LALKLLFFAVLFIASTASATENTPSFHNPHIR-KLGMEYRTIDQKAALGAKPAVYDFPWKGGYDPPINNR
        +  KLLFF +L I +T+SA +  P  H PH R K+ MEYR++ +KAALG KPAVYDFPWKGGY+PP NNR
Subjt:  LALKLLFFAVLFIASTASATENTPSFHNPHIR-KLGMEYRTIDQKAALGAKPAVYDFPWKGGYDPPINNR

TYK18975.1 hypothetical protein E5676_scaffold418G00680 [Cucumis melo var. makuwa]7.7e-1155.13Show/hide
Query:  MASLKFS-LALKLLFFAVLFIASTASATENTPSFHNPHIR-KLGMEYRTIDQKAALGAKPAVYDFPWKGGYDPPINNR
        MAS+    +  KLLFF +L I    ++T   P  H P  R K+ MEYR++ +K ALGAKPAVYDFPWKGGY+PP NNR
Subjt:  MASLKFS-LALKLLFFAVLFIASTASATENTPSFHNPHIR-KLGMEYRTIDQKAALGAKPAVYDFPWKGGYDPPINNR

XP_022141390.1 uncharacterized protein LOC111011803 [Momordica charantia]1.1e-1465.79Show/hide
Query:  MASLKFSLALKLLFFAVLFIASTASATENTPSFH-NPHIRKLGMEYRTIDQKAALGAKPAVYDFPWKGGYDPPINN
        MASL+ S  LKL FFA+L IAS  SA  +TPS H  P IRKLGMEYR++  KA L AK A YDFPWKGGY+PP NN
Subjt:  MASLKFSLALKLLFFAVLFIASTASATENTPSFH-NPHIRKLGMEYRTIDQKAALGAKPAVYDFPWKGGYDPPINN

TrEMBL top hitse value%identityAlignment
A0A0A0KZM0 Uncharacterized protein1.5e-1261.43Show/hide
Query:  LALKLLFFAVLFIASTASATENTPSFHNPHIR-KLGMEYRTIDQKAALGAKPAVYDFPWKGGYDPPINNR
        +  KLLFF +L I +T+SA +  P  H PH R K+ MEYR++ +KAALG KPAVYDFPWKGGY+PP NNR
Subjt:  LALKLLFFAVLFIASTASATENTPSFHNPHIR-KLGMEYRTIDQKAALGAKPAVYDFPWKGGYDPPINNR

A0A0A0L653 Uncharacterized protein2.5e-0749.32Show/hide
Query:  KFSLALKLLFFAVLFIASTASATENT--PSFHNPHIRKLGMEYRTIDQKAAL---GAKPAVYDFPWKGGYDPP
        +  L LKLLFF++L I ST S T N   P FH P IRK+G++ +T D KA +     KP   DFPW GGY  P
Subjt:  KFSLALKLLFFAVLFIASTASATENT--PSFHNPHIRKLGMEYRTIDQKAAL---GAKPAVYDFPWKGGYDPP

A0A5D3D619 Uncharacterized protein3.7e-1155.13Show/hide
Query:  MASLKFS-LALKLLFFAVLFIASTASATENTPSFHNPHIR-KLGMEYRTIDQKAALGAKPAVYDFPWKGGYDPPINNR
        MAS+    +  KLLFF +L I    ++T   P  H P  R K+ MEYR++ +K ALGAKPAVYDFPWKGGY+PP NNR
Subjt:  MASLKFS-LALKLLFFAVLFIASTASATENTPSFHNPHIR-KLGMEYRTIDQKAALGAKPAVYDFPWKGGYDPPINNR

A0A5D3DJ60 Uncharacterized protein4.3e-0754.43Show/hide
Query:  LKFSLALKLLFFA-VLFIAS-TASATENTPSFHNPHIRKLGMEYRTIDQKAALGAK---PAVYDFPWKGGY--DPPINN
        +K SL LKLLFFA +LFIAS T SAT N P  H P IRK+G+EY+   +KA +  K   P   D PW GGY   PPI N
Subjt:  LKFSLALKLLFFA-VLFIAS-TASATENTPSFHNPHIRKLGMEYRTIDQKAALGAK---PAVYDFPWKGGY--DPPINN

A0A6J1CHY3 uncharacterized protein LOC1110118035.5e-1565.79Show/hide
Query:  MASLKFSLALKLLFFAVLFIASTASATENTPSFH-NPHIRKLGMEYRTIDQKAALGAKPAVYDFPWKGGYDPPINN
        MASL+ S  LKL FFA+L IAS  SA  +TPS H  P IRKLGMEYR++  KA L AK A YDFPWKGGY+PP NN
Subjt:  MASLKFSLALKLLFFAVLFIASTASATENTPSFH-NPHIRKLGMEYRTIDQKAALGAKPAVYDFPWKGGYDPPINN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCTCAAATTTTCATTGGCGTTGAAGCTGCTTTTCTTCGCAGTGCTTTTCATCGCCTCTACAGCTTCTGCGACGGAGAACACTCCTTCGTTTCACAATCCTCA
CATTCGTAAGCTGGGCATGGAATATAGAACTATTGATCAGAAGGCTGCGTTGGGAGCAAAGCCAGCAGTTTATGATTTCCCATGGAAGGGTGGTTATGATCCTCCAATCA
ACAACCGTTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAGAAAAAGAAAAACAGTGAGTGAGTGGAAAATGGAAATGGTGTTCTTCATCGTTCATTGCAACTCCAAAATTGGGTATAAATTAAGACTGGTTTGAAAGCTCT
GAGCCTCACAGCAACAACAATGGCTTCTCTCAAATTTTCATTGGCGTTGAAGCTGCTTTTCTTCGCAGTGCTTTTCATCGCCTCTACAGCTTCTGCGACGGAGAACACTC
CTTCGTTTCACAATCCTCACATTCGTAAGCTGGGCATGGAATATAGAACTATTGATCAGAAGGCTGCGTTGGGAGCAAAGCCAGCAGTTTATGATTTCCCATGGAAGGGT
GGTTATGATCCTCCAATCAACAACCGTTGATCCTATTTTCAGCTGTGTTTTCTTTACTTTTGTGGGTTAATGAAAAAAAAAATACAAAAATTAAAAAAAAATTATGTTAT
TTTAACCCATATCCACCTTAAATTCGACGAAATTAAGGTTTAGTTTGGAATTGTGGTATCTTATAAAGTAATGACTTTTCAATGTACTTTTAGAACAATCAACTATAATA
TGAAGTAAATTAGTGTTTGGT
Protein sequenceShow/hide protein sequence
MASLKFSLALKLLFFAVLFIASTASATENTPSFHNPHIRKLGMEYRTIDQKAALGAKPAVYDFPWKGGYDPPINNR