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Tan0016558 (gene) of Snake gourd v1 genome

Gene IDTan0016558
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCACTA en-spm transposon protein
Genome locationLG04:68524490..68524933
RNA-Seq ExpressionTan0016558
SyntenyTan0016558
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046881.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.1e-1452.27Show/hide
Query:  NEADDEFFDMEYHGIGSSTGETSGGASINRKKRGYSRKIQLDRYVNAHGRIPIEINPKFKKSVDPHATSFGLAIGTIVRESYPVRCAT
        +EADDE   ++ H + SSTG TS G+S+     GYSR I+L ++V   GR PIEI  K KKSV P AT F   IG +VRE +PVRC T
Subjt:  NEADDEFFDMEYHGIGSSTGETSGGASINRKKRGYSRKIQLDRYVNAHGRIPIEINPKFKKSVDPHATSFGLAIGTIVRESYPVRCAT

XP_038887408.1 poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida]9.4e-1142.15Show/hide
Query:  EADDEFFDMEYHGIGSSTGE----TSGGASIN--------RKKRGYSRKIQLDRYVNAHGRIPIEINPKFKKSVDPHATSFGLAIGTIVRESYPVRCATF
        +ADD  F      IGSST       SG  S +        R+ RG+SR ++LDR+VN HGRI IEI+ +  K V  +AT F  AIGTI R + P+RC  +
Subjt:  EADDEFFDMEYHGIGSSTGE----TSGGASIN--------RKKRGYSRKIQLDRYVNAHGRIPIEINPKFKKSVDPHATSFGLAIGTIVRESYPVRCATF

Query:  EDVPKAIIDLAKATLMVSQYF
         DV K + DL    L+V+  F
Subjt:  EDVPKAIIDLAKATLMVSQYF

XP_038887411.1 poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida]9.4e-1142.15Show/hide
Query:  EADDEFFDMEYHGIGSSTGE----TSGGASIN--------RKKRGYSRKIQLDRYVNAHGRIPIEINPKFKKSVDPHATSFGLAIGTIVRESYPVRCATF
        +ADD  F      IGSST       SG  S +        R+ RG+SR ++LDR+VN HGRI IEI+ +  K V  +AT F  AIGTI R + P+RC  +
Subjt:  EADDEFFDMEYHGIGSSTGE----TSGGASIN--------RKKRGYSRKIQLDRYVNAHGRIPIEINPKFKKSVDPHATSFGLAIGTIVRESYPVRCATF

Query:  EDVPKAIIDLAKATLMVSQYF
         DV K + DL    L+V+  F
Subjt:  EDVPKAIIDLAKATLMVSQYF

XP_038887413.1 uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida]9.4e-1142.15Show/hide
Query:  EADDEFFDMEYHGIGSSTGE----TSGGASIN--------RKKRGYSRKIQLDRYVNAHGRIPIEINPKFKKSVDPHATSFGLAIGTIVRESYPVRCATF
        +ADD  F      IGSST       SG  S +        R+ RG+SR ++LDR+VN HGRI IEI+ +  K V  +AT F  AIGTI R + P+RC  +
Subjt:  EADDEFFDMEYHGIGSSTGE----TSGGASIN--------RKKRGYSRKIQLDRYVNAHGRIPIEINPKFKKSVDPHATSFGLAIGTIVRESYPVRCATF

Query:  EDVPKAIIDLAKATLMVSQYF
         DV K + DL    L+V+  F
Subjt:  EDVPKAIIDLAKATLMVSQYF

XP_038902987.1 uncharacterized protein LOC120089695 [Benincasa hispida]6.3e-1545.61Show/hide
Query:  MVTPGQQFNEADDEFFDMEYHGIGSSTGETSGGASI-NRKKRGYSRKIQLDRYVNAHGRIPIEINPKFKKSVDPHATSFGLAIGTIVRESYPVRCATFED
        M TP +Q  EAD+EF ++  +   SS G+TS  +S  NRKKR +SR I+L++YV  HG I I IN    K +  H+  F  AIG  VR ++PV C TF +
Subjt:  MVTPGQQFNEADDEFFDMEYHGIGSSTGETSGGASI-NRKKRGYSRKIQLDRYVNAHGRIPIEINPKFKKSVDPHATSFGLAIGTIVRESYPVRCATFED

Query:  VPKAIIDLAKATLM
        VP   I+LAK  L+
Subjt:  VPKAIIDLAKATLM

TrEMBL top hitse value%identityAlignment
A0A5A7TBR8 CACTA en-spm transposon protein6.0e-1134.71Show/hide
Query:  FNEADDEFFDME----------YHGIGSSTGETSG-GASINRKKRGYSRKIQLDRYVNAHGRIPIEINPKFKKSVDPHATSFGLAIGTIVRESYPVRCAT
        F E DD F   E             +G +T E+S   A++  ++R  SR ++L+R+V  +GRIP+ I P+ +K + PHA  F  AIG  VR+++PV C  
Subjt:  FNEADDEFFDME----------YHGIGSSTGETSG-GASINRKKRGYSRKIQLDRYVNAHGRIPIEINPKFKKSVDPHATSFGLAIGTIVRESYPVRCAT

Query:  FEDVPKAIIDLAKATLMVSQY
        + DV +  I++ K  L V ++
Subjt:  FEDVPKAIIDLAKATLMVSQY

A0A5D3BBZ9 CACTA en-spm transposon protein7.8e-1135.65Show/hide
Query:  FNEADDEFFDME----------YHGIGSSTGETSGGASINRKKRGYSRKIQLDRYVNAHGRIPIEINPKFKKSVDPHATSFGLAIGTIVRESYPVRCATF
        F E DD F   E             +G +TG +S   +   ++R  SR ++L+R+V  +GRIP+ I P  +K + PHA  F  AIG  VR+++PVRC  +
Subjt:  FNEADDEFFDME----------YHGIGSSTGETSGGASINRKKRGYSRKIQLDRYVNAHGRIPIEINPKFKKSVDPHATSFGLAIGTIVRESYPVRCATF

Query:  EDVPKAIIDLAKATL
         DV +  I++ K  L
Subjt:  EDVPKAIIDLAKATL

A0A5D3BNG3 CACTA en-spm transposon protein7.8e-1137.39Show/hide
Query:  FNEADDEFFDME-----YHGIGSSTGETSGGASINR-----KKRGYSRKIQLDRYVNAHGRIPIEINPKFKKSVDPHATSFGLAIGTIVRESYPVRCATF
        F E DD F   E       G  SS G+ + G+S  +     ++R  SR ++L+R+V  +GRIP+ I P  +K + PHA  F  AIG  VR+++PVRC  +
Subjt:  FNEADDEFFDME-----YHGIGSSTGETSGGASINR-----KKRGYSRKIQLDRYVNAHGRIPIEINPKFKKSVDPHATSFGLAIGTIVRESYPVRCATF

Query:  EDVPKAIIDLAKATL
         DV +  I++ K  L
Subjt:  EDVPKAIIDLAKATL

A0A5D3BYK4 CACTA en-spm transposon protein5.2e-1552.27Show/hide
Query:  NEADDEFFDMEYHGIGSSTGETSGGASINRKKRGYSRKIQLDRYVNAHGRIPIEINPKFKKSVDPHATSFGLAIGTIVRESYPVRCAT
        +EADDE   ++ H + SSTG TS G+S+     GYSR I+L ++V   GR PIEI  K KKSV P AT F   IG +VRE +PVRC T
Subjt:  NEADDEFFDMEYHGIGSSTGETSGGASINRKKRGYSRKIQLDRYVNAHGRIPIEINPKFKKSVDPHATSFGLAIGTIVRESYPVRCAT

A0A5D3CM32 CACTA en-spm transposon protein7.8e-1135.65Show/hide
Query:  FNEADDEFFDME----------YHGIGSSTGETSGGASINRKKRGYSRKIQLDRYVNAHGRIPIEINPKFKKSVDPHATSFGLAIGTIVRESYPVRCATF
        F E DD F   E             +G +TG +S   +   ++R  SR ++L+R+V  +GRIP+ I P  +K + PHA  F  AIG  VR+++PVRC  +
Subjt:  FNEADDEFFDME----------YHGIGSSTGETSGGASINRKKRGYSRKIQLDRYVNAHGRIPIEINPKFKKSVDPHATSFGLAIGTIVRESYPVRCATF

Query:  EDVPKAIIDLAKATL
         DV +  I++ K  L
Subjt:  EDVPKAIIDLAKATL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGTCACTCCCGGGCAACAGTTCAATGAGGCTGATGATGAATTCTTTGATATGGAATATCATGGCATAGGATCATCCACAGGAGAGACTTCAGGTGGTGCTTCTAT
TAATAGGAAGAAACGTGGGTACTCGCGCAAGATTCAGTTGGATCGGTACGTTAATGCACATGGAAGAATTCCAATAGAGATCAATCCTAAGTTTAAGAAGTCGGTCGACC
CACATGCTACATCGTTTGGCTTGGCTATAGGTACCATAGTGAGAGAATCTTATCCAGTTCGATGTGCAACATTCGAAGACGTACCAAAAGCTATTATAGACTTGGCTAAA
GCAACATTGATGGTAAGTCAATATTTTTGTTCATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGTCACTCCCGGGCAACAGTTCAATGAGGCTGATGATGAATTCTTTGATATGGAATATCATGGCATAGGATCATCCACAGGAGAGACTTCAGGTGGTGCTTCTAT
TAATAGGAAGAAACGTGGGTACTCGCGCAAGATTCAGTTGGATCGGTACGTTAATGCACATGGAAGAATTCCAATAGAGATCAATCCTAAGTTTAAGAAGTCGGTCGACC
CACATGCTACATCGTTTGGCTTGGCTATAGGTACCATAGTGAGAGAATCTTATCCAGTTCGATGTGCAACATTCGAAGACGTACCAAAAGCTATTATAGACTTGGCTAAA
GCAACATTGATGGTAAGTCAATATTTTTGTTCATTGTGA
Protein sequenceShow/hide protein sequence
MMVTPGQQFNEADDEFFDMEYHGIGSSTGETSGGASINRKKRGYSRKIQLDRYVNAHGRIPIEINPKFKKSVDPHATSFGLAIGTIVRESYPVRCATFEDVPKAIIDLAK
ATLMVSQYFCSL